Rhinopithecus bieti (black snub-nosed monkey): 108524037
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Entry
108524037 CDS
T04641
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rbb04131
]
108524037 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbb04147
]
108524037 (COPA)
Membrane trafficking [BR:
rbb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108524037 (COPA)
Exosome [BR:
rbb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108524037 (COPA)
Exosomal proteins of bladder cancer cells
108524037 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
108524037
NCBI-ProteinID:
XP_017720341
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLDALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNANLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPADAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKSQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagctttcaccccaaa
agaccttggatcctgactagtttacataatggggtcatccagttatgggactatcggatg
tgcactctcattgacaagtttgatgaacacgatggtccagtgcgaggcattgacttccat
aagcagcagccactgttcgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgtcttttcacattgcttgggcacttagattatattcgcaccacgttt
tttcatcatgaatatccctggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcaatctagaacctgtgtttgtgtgttaacagggcacaaccattatgtgatgtgt
gctcaattccacccctcagaagacttggtagtatcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcagtggaatcggat
gtgagaggaataactggggttgatctatttggaactacagatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagtaaactgggcggccttccaccccactatgccccttatt
gtatctggggcagatgatcgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgg
gaggttgatacctgccggggccattataacaatgtatcttgtgccgtcttccaccctcgc
caagagttgatcctcagcaattctgaggacaagagtattcgagtctgggatatgtctaag
cggactggggttcagactttccgcagagaccatgatcgtttctgggtcttagctgctcac
cctaaccttaacctctttgcagcaggccatgatggtggtatgattgtgtttaagctggaa
cgggaacggccagcctatgctgttcacggcaatatgctacactatgtcaaggaccgattc
ttacgtcagctggatttcaacagctccaaagatgtagctgtgatgcagctgcggagtggt
tccaagtttccagtattcaatatgtcatacaatccagcagaaaatgcagtcttgctttgt
acgagagctagcaatttagagaatagtacctatgacctgtacaccatccctaaagatgct
gactcccagaatcctgatgcgcctgaagggaaacgatcctcaggcctgacagccgtttgg
gtcgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagatcttctatgctggc
acaggcaatctcctgcttcgagatgcggactctatcacactctttgacgtacagcagaag
cggactctggcatctgtgaagatttctaaagtgaaatatgttatctggtcagcagacatg
tcacatgtggcactactagccaaacacgaacactcatgccctttgcctcttacagccatt
gtgatctgtaaccgcaaactggatgctttatgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggggaccacgggatcattcgaactctggatttacccatctatgtcaca
cgggtgaagggcaacaatgtatactgcctagacagggagtgtcgtccccgggtactcacc
attgatcccactgagttcaaattcaagctggccctgatcaacagaaaatatgatgaggta
ctgcacatggtgaggaatgccaaactagtaggccagtctattattgcttatctccagaag
aagggctatcctgaagtggcacttcattttgtcaaggatgagaaaactcgctttagtctg
gcactggagtgtggaaacattgagattgctctggaagcagccaaagcactggatgacaag
aactgctgggaaaagctgggagaagtggccctgctgcaggggaaccaccagattgtggaa
atgtgctatcagcgtaccaaaaactttgacaaactttccttcctgtatcttatcactggc
aacttagaaaagcttcgcaagatgatgaagattgctgagatcagaaaggatatgagtggc
cactatcagaatgccctatacctgggtgatgtgtcagagcgtgtgcggatcctaaagaac
tgtgggcagaagtccctggcctatctcacagctgctacccatggcttagatgaagaagct
gagagcctaaaggagacatttgacccagagaaggagacaatcccagacattgaccctaat
gccaacctgctccagccacctgcacctatcatgccattggataccaattggcctttattg
actgtatccaagggattttttgaaggcaccattgccagcaaagggaagggaggagcactg
gctgctgacattgacattgacactgttggtacagagggctggggagaggatgcagagcta
caattggatgaagatgggtttgtggaggctacagaaggtttgggggatgatgctcttggc
aagggacaggaagaaggaggtggctgggatgtagaagaagatctggagctccctcctgag
ctggatatatcccctggggcagctggtggggctgaagatggtttctttgtgcccccaacc
aagggaacaagtccaactcagatctggtgtaataactctcagcttccagttgatcacatc
ctggcaggctcttttgaaacagccatgcggctccttcatgaccaagtaggggtaatccag
tttggcccctacaagcaactgttcctacagacatatgcccgaggccgcacaacctatcag
gctctgccctgcctaccctccatgtatggatatcctaatcgcaactggaaggatgcaggg
ctgaagaatggtgtaccagctgtgggcctgaagcttaatgacctcatccaacggttgcag
ctatgttaccagctcaccacagttggcaaatttgaggaggctgtggaaaaattccgttcc
atccttctcagtgtgccacttcttgttgtggacaataaacaagagattgcagaggcccag
cagctcatcaccatttgtcgtgagtacattgtgggtttgtccatggagatagaaaggaag
aagctgcccaaagagactctagaacagcagaagcgcatatgtgagatggcagcctatttc
acccactcaaacctgcagcctgtgcacatgatcctggtgctgcgtacagccctcaatctc
ttcttcaagctcaagaacttcaagacagctgccacctttgctcggcgcctactagaactc
gggcccaagcctgaggtggcacaacagacccgaaaaatcctgtctgcctgtgagaagaat
cctgcagatgcctatcagctcaattatgacatgcacaacccctttgacatctgtgctgca
tcatatcggcccatctaccgtggaaagccagtggaaaagtgtccactcagtggggcctgc
tattcccctgagttcaaaagtcaaatctgtagggtcaccacagtgacagagattggcaaa
gatgtgattggtttaaggatcagtcctctgcagtttcgctaa
DBGET
integrated database retrieval system
