Rhinopithecus bieti (black snub-nosed monkey): 108524396
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Entry
108524396 CDS
T04641
Symbol
COL3A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04611
Platelet activation
rbb04820
Cytoskeleton in muscle cells
rbb04926
Relaxin signaling pathway
rbb04933
AGE-RAGE signaling pathway in diabetic complications
rbb04974
Protein digestion and absorption
rbb05146
Amoebiasis
rbb05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108524396 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
108524396 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
108524396 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
108524396 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
108524396 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
108524396 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108524396 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rbb00536
]
108524396 (COL3A1)
Glycosaminoglycan binding proteins [BR:
rbb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108524396 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
108524396
NCBI-ProteinID:
XP_017720939
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MMSFVQKGSWLLLALLHPTIILAQQEAVEGGCSHLGQSYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRN
GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLGGYPGPAGPPG
PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAMGPSGPAGKDGESGRPGRPG
ERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMG
PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG
SNGAPGQRGEPGPQGHAGAQGPPGPPGSSGSPGGKGEMGPAGIPGAPGLMGARGPPGPPG
ANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPG
AAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPG
SPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG
GPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPG
PKGDAGSPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAG
TPGLQGMPGERGGPGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKG
EGGAPGLPGIAGPRGGPGERGEPGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPG
VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGNNGNPGPQVPXGSPG
KDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAG
PPGMPGPRGSPGPQGVKGESGKPGANGLNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDG
LPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAG
SRGAPGPQGPRGDKGETGERGANGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRG
PVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGV
GAAAIAGVGGEKAGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLISPDGSHKNPAR
NCRDLKFCHPELKSGEYWVDPNQGCKLDAIKVFCNMETGETCISASPLNVPRKHWWTDSG
AEKKHVWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMD
QASGNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVRLP
FVDIAPYDIGGPDQEFGVDVGPVCFL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggagctggctacttcttgctctgcttcatcccactatt
attttggcacaacaggaagctgttgaaggaggatgttcccatcttggtcagtcctacgcg
gatagagatgtctggaagccagaaccatgccaaatttgtgtctgtgactcaggatccgtt
ctctgtgatgacataatatgtgacgatcaagaattagactgccccaacccagaaattcca
tttggagaatgttgtgcagtttgcccacagcctccaactgctcctactcgccctcctaat
ggtcaaggacctcaaggccccaagggagatccaggccctcctggtattcctgggagaaat
ggtgaccctggtattccaggacaaccaggttccccgggttctcctggcccccctggaatc
tgtgaatcatgccctactggtcctcagaactattctccccagtatgattcatatgatgtc
aagtctggagtagcagtaggaggactcggtggctatcctggaccagctggccccccaggc
cctcccggtccccctggtacatctggtcatcctggttcccctggatctccaggataccaa
ggaccccctggtgaacctggacaagctggtcctgcaggccctccaggacctcctggtgct
atgggtccatctggtcctgctggaaaagatggagaatcaggtagacccggacgacctgga
gagcgaggattgcctggacctccaggtatcaaaggtccagctgggatacctggattccct
ggtatgaaaggacacagaggcttcgatggacgaaatggagaaaagggtgaaacaggtgct
cctggattaaagggtgaaaatggtcttccaggtgaaaatggagctcctggacccatgggt
ccaagaggggctcctggtgagagaggacggccaggacttcctggagccgcgggtgctcgg
ggtaatgacggtgctcgaggcagtgatggtcaaccaggccctcctggtcctcctggaact
gctggattccctggatcccctggtgctaagggtgaagttggacctgcagggtctcctggt
tcaaatggtgcccctggacaaagaggagaacctggacctcagggacatgctggtgctcaa
ggtcctcctggccctcctgggagtagtggtagtcctggtggtaaaggcgaaatgggtccc
gctggcattcctggagctcctggactgatgggagcccgcggtcctccaggaccacccggt
gctaatggtgctcctggactgcgaggtggtgcaggtgagcctggtaagaatggtgccaaa
ggagagccaggaccacgtggtgaacgcggtgaggctggtattccaggtgttccaggagct
aaaggcgaagatggcaaggatggatcacctggagaacctggcgcaaatgggcttccagga
gctgcaggagaaaggggtgcccctgggttccgaggacctgctggaccaaatggcatccca
ggagaaaagggtcccgctggagagcgtggtgctccaggccctgcagggcccagaggagcg
gctggagaacctggcagagatggtgtccctggaggtccaggaatgaggggcatgcccgga
agtccaggaggaccaggaagtgacgggaaaccagggcctcccggaagtcaaggagaaagc
ggtcgaccaggtcctcctgggccatctggtccccgaggtcagcccggtgtcatgggtttc
cccggtcctaaaggaaatgatggtgctcctggtaagaatggagaacgaggtggccctgga
ggacctggccctcagggtcctcctggaaagaatggtgaaactggacctcagggaccccca
gggcctactgggcctggtggtgacaaaggagacacaggaccccctggtccacagggatta
caaggcttgcctggtacaggtggtcctccaggagaaaatggaaaacctggggaaccaggt
ccaaagggtgatgccggttcacctggagctccaggaggcaagggtgatgctggtgcccct
ggtgaacgtggacctcctggattggctggggccccaggacttagaggtggagctggtccc
cctggtcctgaaggaggaaagggcgctgctggtcctcctgggccacctggtgctgctggt
actcctggtctgcaaggaatgcctggagaaagaggaggtcctggaagtcctggtccaaag
ggtgacaagggtgaaccaggcggtccaggtgctgatggtgtcccagggaaagatggtcca
aggggtcctactggtcctattggtcctcctggcccagctggccagcctggagataagggt
gaaggtggtgcccctggacttccaggtatagctggacctcgtggtggccctggtgagaga
ggtgaacctggccctccaggacctgctggcttccctggtgctcctggacagaatggtgag
cctggtggtaaaggagaaagaggggctccgggtgagaaaggtgaaggaggccctcctgga
gttgcaggaccccctggaggttctggacctgctggtcctcctggtcctcaaggtgtcaaa
ggtgaacgtggcagtcctggtggacccggtgctgctggcttccctggtgctcgtggtctt
cctggtcctcctggtaataatggtaacccaggaccccaggtcccgnngggttctccaggc
aaggatggtcccccaggtcctgcaggtaacacaggtgctcctggcagccctggagtgtct
ggaccaaaaggtgatgctggccaaccaggagagaagggatcacctggtgcccaggggccc
ccaggagctccaggcccacttggaattgctgggattactggagcacggggtcttgcagga
ccaccaggcatgccaggtcctaggggaagccctggccctcagggtgtcaagggtgaaagt
gggaaaccaggagctaatggtctcaatggagaacgtggtccccctggaccccaaggtctt
cctggtctggctggtacagctggtgaacctggaagagatggaaaccctggatcagatggt
cttccaggccgagatggatctcctggtggcaagggtgatcgtggtgaaaacggctctcct
ggtgcccctggcgctcctggtcatccaggcccacctggtcctgtcggtccagctggaaag
agtggtgacaggggagaaagtggccctgccggccctgctggtgctcccggtcctgctggc
tcccgaggtgctcctggtcctcaaggcccacgtggtgacaaaggtgaaacaggtgaacgt
ggagctaatggcattaaaggacatcgaggattccctggtaatccaggtgccccaggttct
ccaggccctgctggtcagcagggtgcaatcggtagtccaggacctgcaggccccagagga
cctgttggacccagtggacctcctggcaaagatggaaccagtggacatccaggtcccatt
ggaccaccagggcctcgaggtaacagaggtgaaagaggatctgagggctccccaggccac
ccagggcaaccaggcccccctggacctcctggtgcccctggtccttgctgtggtggtgtt
ggagccgctgccattgctggggtcggaggtgaaaaagctggcggttttgccccatattat
ggagatgaaccaatggatttcaaaatcaacaccgatgagattatgacttcactcaagtct
gttaacggtcaaatagaaagcctcattagtcctgatggttctcataaaaaccctgctaga
aactgcagagacctgaaattctgccatcctgaactcaagagtggagaatattgggttgac
cctaaccaaggatgcaaattggatgccatcaaggtattctgtaatatggaaactggggaa
acatgcataagtgccagtcctttgaatgttccacggaaacactggtggacagattctggt
gctgagaagaaacacgtttggtttggagagtccatggatggtggttttcagtttagctat
ggcaatcctgaacttcctgaagatgtccttgatgtgcagctggcattccttcgacttctc
tccagccgagcttcccagaacatcacgtatcactgcaaaaatagcattgcgtacatggat
caggccagtggaaatgtaaagaaggccctgaagctgatggggtcaaatgaaggtgaattc
aaggctgaaggaaatagcaaattcacctacacagttctggaggatggttgcacgaaacac
actggggaatggagcaaaacagtctttgaatatcgaacacgcaaggctgtgagactacct
tttgtagatattgcaccttatgacattggtggtcctgatcaagaatttggtgtggacgtt
ggccccgtttgctttttataa
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integrated database retrieval system
