Rhinopithecus bieti (black snub-nosed monkey): 108525988
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Entry
108525988 CDS
T04641
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108525988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108525988
03041 Spliceosome [BR:
rbb03041
]
108525988
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108525988
Spliceosome [BR:
rbb03041
]
Complex B
Other components
Prp19-related factors
108525988
Complex C
108525988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_M
TPR_2
HAT_Syf1_CNRKL1_C
TPR_14
TPR_8
HAT_Syf1_CNRKL1_N
TPR_12
Nic96
HAT_PRP39_C
TPR_1
HAT_PRP39_N
TPR_7
DUF5575_C
DHR-2_Lobe_A
TPR_16
PPR
RPN7
Motif
Other DBs
NCBI-GeneID:
108525988
NCBI-ProteinID:
XP_017722203
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
LPEGWVGPQLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELC
DLISQNPDKVQSLNVDAIIRXGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRT
VMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLL
NSVLLRQNPHHVHEWHKRVALHQGRPGRCVKPALVLPEGQFPAELGSHPPSPIINTYTEA
VQTVDPFKATGKPHTL
NT seq
767 nt
NT seq
+upstream
nt +downstream
nt
ctgcctgaagggtgggtcggtccccagctgagtcccgagagtgcagaggagtacattgag
tacctcaagtcaagtgaccggctggatgaggctgcacagcgcctggccactgtggtgaac
gacgagcgttttgtgtctaaggccggcaagtccaactaccagctatggcacgagctgtgc
gacctcatctcccagaacccggacaaggtacagtccctcaatgtggacgccatcatccgc
nggggcctcacccgcttcaccgaccagctgggcaagctctggtgttcgctcgccgactac
tacatccgcagcggccacttcgagaaggctcgggatgtgtacgaggaggccatccggacg
gtgatgaccgtgcgggacttcacacaggtgtttgacagctatgcccagttcgaggagagc
atgatcgctgcaaagatggagaccgcctcagagctggggcgcgaggaggaggatgatgtg
gacctggagctgcgcctggcccgcttcgagcagctcatcagccgacggcccctgctgctc
aacagcgtcttgctgcgccaaaacccacaccacgtgcacgagtggcacaagcgtgtcgcc
ctgcaccagggccgccccgggaggtgcgtgaagcctgccctggtcctccccgagggccag
tttcctgcagaactggggagccacccaccttcacccatcatcaacacctacacagaggct
gtgcagacagtggaccccttcaaggccacaggcaagccccacactct
DBGET
integrated database retrieval system
