Rhinopithecus bieti (black snub-nosed monkey): 108527057
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Entry
108527057 CDS
T04641
Symbol
COL4A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04151
PI3K-Akt signaling pathway
rbb04382
Cornified envelope formation
rbb04510
Focal adhesion
rbb04512
ECM-receptor interaction
rbb04518
Integrin signaling
rbb04820
Cytoskeleton in muscle cells
rbb04926
Relaxin signaling pathway
rbb04933
AGE-RAGE signaling pathway in diabetic complications
rbb04974
Protein digestion and absorption
rbb05146
Amoebiasis
rbb05165
Human papillomavirus infection
rbb05200
Pathways in cancer
rbb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108527057 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108527057 (COL4A1)
04518 Integrin signaling
108527057 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108527057 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108527057 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108527057 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
108527057 (COL4A1)
09158 Development and regeneration
04382 Cornified envelope formation
108527057 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108527057 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
108527057 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108527057 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
108527057 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108527057 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbb04147
]
108527057 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
rbb00536
]
108527057 (COL4A1)
Exosome [BR:
rbb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108527057 (COL4A1)
Glycosaminoglycan binding proteins [BR:
rbb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108527057 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108527057
NCBI-ProteinID:
XP_017723683
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MGPRLSVWLLLLPAALLLHEEHSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGL
PGNPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGS
PGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGP
KGFPGLPGQAGPPGLPVPGQAGAPGFPGERGEKGDRGFPGASLPGPSGRDGLPGPPGSPG
PPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGLIGEIGEKGKILXFFKKWSKGESCLICD
TTGYRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPG
EIYFDLRLKGDKGDPGFPGQPGIPGRAGSPGRDGRPGLPGPKGSPGSVGLKGERGPPGGV
GFPGSRGDTGPPGPPGYGPTGPIGDKGQAGFPGGPGSPGLPGPKGEPGKVVPLPGPPGAE
GLPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQQGIGFPGPPGPKGVDGLPGDVGPPG
TPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGLPGLPGIAGTPGEKGSVGVPGVPGEHGA
IGPPGLQGIRGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFP
GFPGLDMPGPKGDKGSQGLPGITGQSGLPGLPGQQGSPGIPGFPGSKGEMGVMGTPGQPG
SPGPVGVPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKG
DQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKG
SVGGMGLPGTPGEKGVPGIPGPQGSPGSPGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGI
AGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGV
KGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEV
GFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGRATEGPKGDRGPQGQPGLPGLPG
PMGPPGLPGIDGVKGDKGNPGWPGAPGVPGSKGDPGFQGMPGIGGSPGITGSKGDMGPPG
VPGFQGPKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLK
GLQGPPGPKGQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPTGPTGPRGFPGPPGPDGLP
GSMGPPGTPSVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAG
SCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVC
EAPAMVMAVHSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSA
PFIECHGRGTCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcagcgtctggctgctgctgctgcccgccgcccttctgctccacgag
gagcacagccgggccgctgcgaagggtggctgtgctggctctggctgtggcaaatgtgac
tgccatggagtgaagggacaaaagggcgaaagaggcctcccagggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgaggggccgcagggaccaccaggacaaaagggtgat
actggagaaccaggactacctggaacaaaagggacaagaggacccccgggagcatctggc
taccctggaaacccaggacttcccggtattcctggccaagacggcccaccaggcccccca
ggtattccaggatgcaatggcacaaagggagagagagggccgctcgggcctcctggcttg
cctggttttgctggaaatcccggaccaccagggttaccaggaatgaagggtgatccaggt
gagatacttggccatgtgcccgggatgctgttgaaaggtgaaagaggatttcccggactc
ccagggaatccaggcccaccaggattgccaggacttcaaggtcctgttgggcctccagga
tttaccggaccaccgggtcctccaggtcctcccggccctccaggtgaaaagggacaaatg
ggcttaagttttcaaggacccaaaggtgacaagggtgaccaaggggtcagtgggcctccg
ggagtaccaggacaagcccaagttcaagaaaaaggagattttgccaccaagggagaaaag
ggccaaaaaggtgaacctggatttcagggaatgccaggggtcggagagaaaggtgaaccc
ggaaaaccaggacccagaggaaaacctggaaaagatggtgacaaaggggaaaaagggagt
cccggttttcctggtgaacccgggtacccaggactcgtaggccgccagggcccgcaggga
gaaaagggtgaagcaggtcctcctggcccaccaggaattgttataggcacagggcctttg
ggagaaaaaggagagcggggctaccctggaactccagggccaagaggagagccaggcccg
aaaggtttcccaggactaccaggccaagccggacctccaggcctccctgtacctgggcag
gctggtgcccctggcttccctggtgaaagaggagaaaaaggtgaccgaggatttccgggt
gcatctctgccaggaccaagtggaagagacgggctcccgggtcctcctggttcccccggg
ccccctgggcagcctggctacacaaatggaattgtggaatgtcagcccggacctccaggt
gaccaaggtcctcctggaattccagggcagccaggattgataggcgaaattggagagaaa
ggtaagatactttgattttttaaaaaatggtcaaaaggagagagttgcctcatctgtgat
acaactggatatcgggggcctcccgggccacagggacccccaggagaaataggtttccca
ggacagccaggggccaagggcgacagaggtttgcctggcagagatggtgttgcaggagtg
cctgggcctcaaggtacaccagggctgataggccagccaggagccaagggggagcctggt
gagatttatttcgacctgcggctcaaaggtgacaaaggagacccaggctttccaggacag
cccggcataccagggagggcgggttctcctggaagagatggccgtccgggtcttcctggc
cccaagggctcgccgggttctgtaggattgaaaggagagcgtggcccccctggaggagtt
ggattcccaggcagtcgtggtgacaccggcccccctgggcctccaggatatggtcctact
ggtcccattggtgacaaaggacaagcaggctttcctggaggccctgggtccccaggcctg
ccaggtccaaagggtgaaccaggaaaagttgttcctttaccaggcccccctggagcagaa
ggactgccggggtccccaggcttcccaggtccccaaggagaccgaggctttcctggaacc
ccaggaaggccaggcctgccaggagagaagggtgctgtgggccagcagggaattggattt
ccagggccccctggccccaaaggtgttgacggcttacctggagatgtggggcctccaggg
actccaggtcgcccaggatttaatggcttacctgggaacccaggtgtgcagggccagaag
ggagagcctggagttggtctgccgggactcaaaggtttgccaggtctacccggcattgct
ggcacacccggggagaaggggagcgttggggtaccaggcgttcctggagaacacggagcg
atcggaccccctgggcttcaggggatcagaggtgaaccggggcctcctggattgccaggc
tccgtggggtctccaggagttccaggaattggcccccctggagctaggggcccccctgga
ggacagggaccaccggggttgtcgggccctcctggaataaaaggagagaagggtttcccc
ggattccccggactggacatgccaggccctaaaggagataaagggtctcaaggacttcct
ggcataacaggacagtcagggctccctggccttcctggacagcaggggtctcctggcatt
cctgggtttccaggttccaagggagaaatgggcgtcatggggaccccagggcagccgggc
tcaccaggaccagtgggtgttccgggattaccgggtgaaaaaggggaccatggctttccg
ggctcctcaggacccaggggagaccctggcctgaaaggtgataagggggatgtcggtctc
cctggcaagcctggctccatggataaggtggacatgggcagcatgaagggccagaaggga
gaccaaggagagaaaggacaaattggaccaattggtgagaaaggatcccgaggagaccct
gggaccccaggagtgcctggaaaggatgggcaggcaggacagcctgggcagccaggaccg
aaaggtgatccaggtataagtggaaccccaggtgctccaggacttccgggaccaaaagga
tctgttggtggaatgggcttgccaggaacacctggagagaaaggtgtgcctggcatccct
ggcccacaaggttcacctggctcacctggagaaaaaggtgcaaaaggagcgaaagggcag
gcaggcccacctggcataggcatcccagggctgcctggtgaaaagggagatcaagggata
gcgggtttcccaggaagccctggagagaagggagaaaaaggaagcattgggatcccagga
atgccagggtccccaggccttaaagggtctcctgggagtgttggctatccagggagccct
gggctgcctggagaaaaaggtgacaaaggcctcccaggattggatggcatccctggtgtc
aaaggagaagcaggtcttcctgggacgcctggccccacaggcccagctggccagaaaggg
gagccaggcagtgacggaatcccggggtcagcaggagagaagggtgaaccaggtctacca
ggaagaggattcccagggtttccaggggccaaaggagacaaaggttcaaagggcgaggtg
ggtttcccaggattagccgggagcccaggaattcctggatccaaaggagagcaaggattc
atgggtcctccagggccccagggacaaccagggttaccaggatccccaggccgtgccacg
gaggggcccaaaggagaccgtggacctcagggccagcctggcctgccaggacttccggga
cccatggggcctccggggcttcctgggattgatggagttaaaggtgacaaaggaaatcca
ggctggccaggagcacccggtgtcccagggtccaagggagaccctggattccagggcatg
cctggtattggtggctctccaggaatcacaggctctaagggtgatatggggcctccagga
gttccaggatttcaaggtccaaaaggtcttcctggcctccagggaattaaaggtgatcaa
ggcgatcaaggtgtcccgggagctaaaggtctcccgggtcctcctggccccccaggtcct
tacgacatcatcaaaggggagcccgggctccctggtcctgagggtcccccagggctgaaa
gggcttcagggacctccaggccccaaaggccagcaaggtgttacaggattggtgggtatc
cctggacctccaggtatccctgggttcgacggtgcccctggccagaaaggagagatggga
cctaccgggcctactggtccaagaggatttccaggtccaccaggccctgatgggttgcca
gggtccatggggcccccaggcaccccatctgttgatcatggcttccttgtgaccaggcac
agtcaaacaatagacgacccacagtgtccctctgggaccaaaattctttaccatgggtac
tctttgctctacgtgcaaggcaacgaacgggcccatggccaggacttgggcacggccggc
agctgcctgcgcaagttcagcacaatgcccttcctgttctgcaatattaacaacgtgtgc
aactttgcatcacgaaatgactactcgtactggctctccacccccgagcccatgcccatg
tcaatggcacccatcacgggggacaacataagaccatttattagtaggtgtgctgtgtgt
gaggcgcccgccatggtgatggccgtgcacagtcagaccattcagatcccaccgtgcccc
agcgggtggtcctcgctgtggatcggctactcttttgtgatgcacaccagcgctggtgca
gaaggctctggccaagccctggcatcccctggctcctgtctggaggagtttagaagtgcg
ccattcatcgagtgtcacggccgtgggacctgtaattactacgcaaatgcttacagcttt
tggctcgccaccatagagaggagcgagatgttcaagaagcccacgccgtccaccttgaag
gcaggggagctgcgcacacacgtcagccgctgccaagtctgtatgagaagaacataa
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