Rhinopithecus bieti (black snub-nosed monkey): 108531654
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Entry
108531654 CDS
T04641
Symbol
PCF11
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein Pcf11
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108531654 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbb03021
]
108531654 (PCF11)
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108531654 (PCF11)
Transcription machinery [BR:
rbb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108531654 (PCF11)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
108531654 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
108531654
NCBI-ProteinID:
XP_017730707
LinkDB
All DBs
Position
Unknown
AA seq
1555 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVXNVGREYLTAFTXNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGPSLQIQDVKGTNRDPRLN
RISQHSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELEQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTAEKKDKDEHMKSSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTPPSRE
DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG
WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDDFLVVVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYED
SDKPFVDSPASRFSGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPRI
DGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ
AGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG
GLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPH
GQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRI
EGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPG
QQVQPRFDGVPQRFDGPQHQQTSRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPG
NAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQF
GNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQNPSGALPKAYP
DNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVSEVAAQPPPEEEEDQNEDQDVPDLTN
FTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVT
HRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAV
ESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVE
NPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPSEIKTENDTIESV
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcgctcgaagacctgaccttcaatagcaagccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatt
gtgnaaaacgttggaagagagtatctcactgcctttactnaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaagttacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaggagccttcaacacctggtacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacacaa
gaacaactaataaggcagcagttactggcaaagcaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggaaacatccaatttaggtcctggatctgcaccatccaaattacatgtttcacag
attccccctatggcagttaaagctcctcatcaggttcctgtgcaatctgagaaaagccgt
ccaggaccatccttacaaattcaggatgtgaaaggaactaaccgggatcctcgtctgaac
aggataagccaacattctcatggaaaagatcaaagtcacaggaaagaatttctaatgaac
acgttaaaccagtctgatattaagacaagtaaaactataccctctgaaaaactcaattca
tccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaacaatta
gattctaaatcaaaatcgaaatcgaaatcaccatcacctttgaaaaacaaattatctcac
acaaaagacttgaaaaatcaagaatcagaaagtatgaggttgtctgatatgaacaagaga
gacccaagattaaaaaaacatcttcaggataagactgatggcaaagatgatgatgtgaaa
gagaagagaaaaactgcagaaaaaaaggataaagatgagcacatgaagtcatctgaacac
agactggctggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacaata
acagaagagtcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcgatca
agatctcgatcacccaagtctaggtcaccaattatacattccccaaagagaagagatagg
cggtcacccaaacgaaggcaaagaagtatgtctccaacgtcaacacctaaagctggaaag
attcgccaatctggagttaagcagtcacatatggaagagtttacaccaccttctagggaa
gacagaaacgctaagagaagtactaaacaggatattcgggatccaaggcgaatgaaaaag
actgaagaggagcggccacaagaaactacaaatcagcattctacaaagtcaggcactgaa
ccaaaggagaatgtagaaaactggcaaagttccaagtctgccaaaagatggaaatctggt
tgggaagaaaataaaagcttacagcaggttgatgaacatagtaaacctcctcatctgagg
catagggagagctggtcaagtactaaaggaattttatcacctcgagccccaaaacagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gacttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtgtgcga
gaagagcagagatctccattcaatgatcgttttccacttaagcgacctcgatacgaagat
tcagataaaccatttgtagatagcccagcatcaagattctctggcctggatacaaatcag
cgacttacagctttagctgaagacagaccattatttgatggacctagtaggccatcagta
gcaagagatggcccaaccaagatgatttttgaaggacctaataaattaagccctcgaatt
gatggacctcccacaccagcttctcttcggtttgatgggtcaccaggacaaatgggggga
ggaggccctttgagatttgaagggccacaaggtcagctaggaggtggttgtcctttgaga
tttgaagggcctccaggaccagtggggacacctctgcggtttgagggcccaattggtcaa
gcaggaggaggtggttttcggtttgaaggttcccctggtctgaggtttgagggatctgca
ggtggtttgcgatttgagggaccagggggccagcctgtgggtggtctgaggtttgaggga
catcgtggtcaacccgtgggtggtctaaggtttgagggacctcatggtcagcctgtgggt
ggacttagatttgataatccccgaggtcagcctgtaggtggacttagatttgaggggggt
catggtccatcaggggctgcgattaggtttgatggacctcatggtcagccaggaggtgga
atcagatttgagggccctttgctacagcaaggagttggaatgaggtttgagggccctcat
ggtcagtcagtagctggtctgagatttgagggacaacataatcaacttggtgggaacctt
aggtttgagggtccacatggccaaccaggggttggtatcaggtttgaaggccctttagtc
caacaaggaggtggaatgaggtttgagggtccttctgtaccaggaggtggcctgagaatt
gaagggcctctgggtcaaggtggtccaagatttgaaggttgtcatgctttaaggtttgat
gggcagccaggtcagccgtcactcttgccaagatttgatggattacatggtcagccaggt
cctagatttgaaaggactcctggtcagccaggccctcagaggtttgatggaccacctgga
cagcaggttcagcccagatttgatggtgtacctcaaagatttgatggtccacaacatcag
cagacatcaaggtttgatattcctcttggtcttcaaggcacaagatttgacaatcaccct
tcacaaaggcttgaatcagtatctttcaatcagactggtccatataatgatccacctggc
aatgcttttaatgccccatcccaaggactacagttccaaagacatgaacaaatatttgat
tcacctcaaggaccaaattttaatggaccacatggccctggaaaccagagtttctctaat
ccacttaacagagcttctggacactattttgatgaaaaaaatcttcagagttctcaattt
ggaaactttggcaatatacctgctccaatgacagtaggaaatattcaggcatctcaacag
gttctgagtggtgttgctcagccagtagcttttggtcaaggacaacagtttttaccagtt
catccacaaaatcctggatttgttcagaatccttcaggagccctccctaaggcgtatcct
gataatcatctcagtcaagtggatgtaaatgaattgttttcaaaattgctaaagacagga
attctcaaattgtcccaacccgattcagctacaacacaagtaagtgaagtagctgctcag
cctccccctgaagaggaggaagatcaaaatgaagatcaagatgttccagatcttactaat
tttacagttgaagaattgaaacaacgttatgacagtgttataaatcgactatacactggt
attcagtgttactcttgtggaatgaggtttacaacatcacagacagatgtttatgcggat
catttggactggcattatcggcaaaatagaactgaaaaggatgttagcagaaaagtcact
catagacgttggtactacagtttaacagactggatagaatttgaggagatagctgatctg
gaagaacgggcaaagagccagttttttgaaaaggtgcatgaagaagttgtgctcaaaact
caagaggctgctaaagaaaaagagttccaaagtgtacctgctggaccagctggagcagtt
gagagttgtgaaatctgtcaagaacaatttgaacaatactgggatgaagaagaggaggaa
tggcatttgaaaaatgctattagagtagatggaaagatttatcatccatcatgttatgaa
gattatcaaaatacatcttcatttgattgtacaccatctcccagcaagacaccagttgaa
aaccccctgaatattatgttgaacattgtcaaaaacgaattgcaggaaccctgtgaaagt
cccaaagttaaggaagaacgaattgatacaccaccagcttgtacagaggaaagcatagca
acaccctctgaaattaaaacagaaaatgacacaattgagtcagtttaa
DBGET
integrated database retrieval system
