Rhinopithecus bieti (black snub-nosed monkey): 108534542
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Entry
108534542 CDS
T04641
Symbol
XAB2
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108534542 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108534542 (XAB2)
03041 Spliceosome [BR:
rbb03041
]
108534542 (XAB2)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108534542 (XAB2)
Spliceosome [BR:
rbb03041
]
Complex B
Other components
Prp19-related factors
108534542 (XAB2)
Complex C
108534542 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_8
TPR_12
TPR_15
TPR_1
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
108534542
NCBI-ProteinID:
XP_017735465
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETAQSWGARRRMMWTWSCAWPASSSSSADGPCCSTASCCAKTHTTCTSG
TSVSPCTRAAPGRSSTPTQRLCRQWTPSRPQASPTLCGWRLPSFMRTTXQLDDARVILEK
ATKVNFKQXWMTWQACGVSAGSWSSDTRTTMRPCGCCERPRRCLPAGXEYFDGSEPVQNR
VYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFK
AYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLY
AQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVL
SDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDT
IKEMLRIRRSVQATYNTQVNFMAWPRRLASKSQDMSDLAPGQSGMDDMKLLEQRAEQLAA
EAERDQPPRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQ
QSVPAAVFGSLKED
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactgtcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacatcgagttcaaacagggcgccccaaagcccaggctcaatcagctatatgagcgggca
ctcaagctgctaccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgaccgaccccgcctacgaagatgtcaacaactgtcacgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctc
atggaccaggggcgcgtcacacacacccgccgcacattcgaccgtgccctccgggcactg
cccatcacgcagcactctcgaatttggcccctgtatctgcgcttcctgcgctcacaccca
ctgccggagacagctgtgcgaggctatcggcgcttcctcaagctgagtcccgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggctgcacagcgcctg
gccactgtggtgaacgacgagcgttttgtgtctaaggccggcaagtccaactaccagcta
tggcacgagctgtgcgacctcatctcccagaacccggacaaggtacagtccctcaatgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgt
tcgctcgccgactactacatccgcagcggccacttcgagaaggctcgggatgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgtttgacagctatgcc
cagttcgaggagagcatgatcgctgcaaagatggagaccgcccagagctggggcgcgagg
aggaggatgatgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccgac
ggcccctgctgctcaacagcgtcttgctgcgccaaaacccacaccacgtgcacgagtggc
acaagcgtgtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagagg
ctgtgcagacagtggaccccttcaaggccacaggcaagccccacactctgtgggtggcgt
ttgccaagttttatgaggacaacgnggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcagnngtggatgacctggcaagcgtgtggtgtcagtgcg
gggagttggagctccgacacgagaactacgatgaggccttgcggctgctgcgaaaggcca
cggcgctgcctgcccgccgggnccgagtactttgatggctccgagcccgtgcagaaccgc
gtgtacaagtcgctgaaggtctggtccatgctcgccgacctggaggagagcctcggcacc
ttccagtccaccaaagccgtgtatgaccgcatcctggacctgcgcatcgcgacaccccag
attgtcatcaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaag
gcgtacgagcgcggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacc
tacctgaccaaattcattgcccgctatgggggccgcaagctggagcgggcgcgagacctg
tttgaacaggctctggatggctgtcccccaaaatatgccaagaccttatacctgctgtac
gcacagctggaggaggagtggggcctggcgcggcatgccatggccgtgtacgagcgtgcc
accagggccgtggagcccgcccagcagtatgacatgttcaacatctacatcaagcgggcg
gccgagatctatggggtcacgcacacccgtggcatctaccagaaggccattgaggtgctg
tcggacgagcatgcgcgtgagatgtgcctgcggtttgcagacatggagtgcaagctcggg
gagatcgaccgtgccagggccatctacagcttctgctcccagatctgtgacccccggacg
actggcgcattctggcagacgtggaaggacttcgaggtccggcacggcaatgaggacacc
atcaaggagatgctgcgcatccggcgcagcgtgcaggccacgtacaacacgcaggtcaac
ttcatggcatggcctcgcagactcgcttcaaagtctcaggacatgtctgacctggccccc
gggcagagcggcatggacgacatgaagctgctggaacagcgggcagagcagctggcggct
gaggcggagcgtgaccagcccccgcgtgcccagagcaagatcctgttcgtgaggagtgac
gcctcccgggaggagctggcggagctggcacagcaggtcaaccctgaggagatccagctg
ggcgaggacgaggacgaggatgagatggacctggagcccaacgaggttcggctggagcag
cagagcgtgccagccgccgtgtttgggagcctgaaggaagactga
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