Rhinopithecus bieti (black snub-nosed monkey): 108535253
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Entry
108535253 CDS
T04641
Symbol
COL20A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108535253 (COL20A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
DUF4959
Motif
Other DBs
NCBI-GeneID:
108535253
NCBI-ProteinID:
XP_017736639
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MAWPVPLHSPSTMSSRAPAHLGLCLWLWLSTTLGREPGQASGHLRLTVLPEDRLQMKWRE
SEGSGLGYLVQVQPMAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRFLLAR
REFVIEDLKSSSLDRNNQRPLSSGAPEPTPSLMGNPDPEQASEPRVAFAPSRDPPIPGGP
QFRCLPPVPADMVFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGDAQ
TEWNLNSFGTKEQVLAAVHRLCYKGGNTFTGMAQAAPPSILRADLLLPPSQTLGAGVPTL
VILVTDGKSQDDVHTAARVLKDLGVNIFAVGVKNADEAELRLLASPPRDITVHNVLDFPQ
LATLASLLSRLVCQRLQDGGPRRGPAAAPALDTLPAPTSLVLSQVTSSSIHLSWTPAPRL
PLKYLIVWRASRGGTPGQVVVEGPAASAELHNLTSRTEYLVSVFPIYEGGVGEGLQGLAT
TAPLSPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASSKGEEEEREVQVRRPEVLL
DGLEPGRDYEVSVQSLRGPESSEARGIRARTPILAPPRHLGFSDVSHDAARVIWEGTPRP
VRLVRVTYVSSEGGHSGQTEAPGNATSATLGPLSSSTTYTVRVTCLYPGGGSSTLTGEVT
TKKVPSPSQLSVTELQGDAVQLAWVAAAPSGVLVYQIKWTPLGEGKAHEISVPGNLGTAI
LPGLGRHTEYDVTILAYYRDGARSDPVSLRYTPSTVNRSPPSNLALASETPDSLQVSWTP
PRGRVLHYRLTYAPASGSGPEKSVSVPGPRSHVTLPDLQAATKYRVLVSAVYAAGRSEAV
SATGQTACPALRPDSSLPGFDLMVAFGLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQL
TRRVSDVHPAPLPPEHTIVFLVRLLPETPREAFALWQMTAEDFQPVLGVLLDAGRKSLTY
FHRDPRAALQEATFDPQEVRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEVGSAP
SAGFITLGRLAKARGPRSSSAAFQLHTLQIVCGDTWADEDRCCELPASRDGETCPAFVSA
CSCSSETPGPPGPQGPPGLPGRKGTPGEQGFPGPRGPPGVKGEKGDHGLPGLQGHPGHQG
IPGRVGLQGPKGMRGLEGTAGLPGPPGPRGFHGMAGARGTSGERGAPGAMGPTGLPGPKG
ERGEKGEPQSLATLYQLVSQASHVSKFDSFHENTRPPMPILEQKLEPGTEPLGSSGTRSK
ALLPGEWGHGSRRLGGRGTGLLALGEGVVASXGASCPLVLGLERRSVSAQPPLLETPLSS
LWGAGVRTRGFPEPTQSQSXRRGQPRPGLPRPSR
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggcatggcctgttcccctccacagcccgagcaccatgagctcccgagcccctgcacac
ctcggcctctgcctctggctgtggctgagcaccaccctgggaagagagccaggacaagca
agtggccacctgaggctgactgtgctgcctgaggaccggctgcagatgaagtggagagag
tcggaggggagcggcctcggctacctggtgcaggtgcagcccatggcaggggactcggaa
caggaggtgatactgaccaccaagacccctaaggccacagtggggggcctgagcccctcc
aagggctacaccttgcagatcttcgagctcactggctctgggcgcttcctgctggctcgg
agggagtttgtgattgaggatctgaagagtagctccttggacaggaacaaccagagacct
ctcagctctggagccccggagcccaccccctccctcatggggaacccagacccagagcag
gcttccgagccccgagttgccttcgcgccaagccgggatccgcccattcccggtggcccc
cagttccgctgcctaccccctgtgcctgctgacatggtcttcctggtggacgggtcctgg
agcattggccacagtcacttccagcaggtcaaggacttcctggccagcgtcattgcaccc
tttgaaatcgggccggataaggtccaagtaggcctgactcagtacagcggcgatgcccag
actgagtggaacctgaactccttcggcaccaaggagcaggtgctggcagctgtgcaccgc
ctctgctacaagggggggaacacgttcacaggtatggcccaggccgcccctccctccatc
ctgagggcggacctccttctgccgccctcccagaccctgggagcaggtgtgccaacgttg
gtgattctggtgacagacggcaagtcccaggacgatgtacacactgctgcccgtgtcctc
aaggacctgggcgtgaacatcttcgctgtgggtgtgaagaacgccgatgaggctgagctg
aggctcctggcgtccccgccgcgggacatcaccgtccacaacgtgctggacttcccgcag
cttgccacgctggctagcctgctcagccgcctcgtctgccagaggctgcaggatgggggc
ccgcggcggggcccagcagcggctccagccctggacaccctccccgcccccaccagcctg
gtcctgagccaggtgacctcctccagcatccacctgtcctggactccagccccccggctc
cccctcaagtatctgattgtttggcgagcctccagaggtggcaccccaggccaggtggtg
gtggaggggcctgccgcctccgcagagctgcacaacctgacctcccgcacggagtacctg
gtctccgtgttccccatctacgagggcggggttggcgagggcctgcagggcctggcgacc
acagcacctctgtctccgccccgggcgctgaccctggccgcagtgacgcccagaaccgtc
cacctcacctggcagccctcagccggggccacccactacctggtgcgatgctcacctgct
tcctccaagggtgaggaggaggagcgagaggtgcaggtgaggcggcctgaggtgctgctg
gatggcctggaaccaggcagggactatgaggtctcggtgcagagcctgcgaggccctgag
agcagcgaggcccggggcatccgtgccaggacccccatcctggccccaccgagacacctg
ggcttctcagacgtgagccacgacgcagcgcgagtgatctgggagggcaccccaaggcct
gtgcgcctggtcagggtcacctatgtctccagcgagggtggacactcggggcagacagag
gctcctgggaacgctacctcggccacactggggcccctctcttcctccaccacctacact
gtccgtgtcacctgcctctaccctgggggtggctcctctacactgaccggcgaggtcacc
accaagaaagttcctagcccaagccaactgtccgtgacggagctgcaaggggacgcagtc
cagctggcgtgggtggctgcagccccatctggcgtgcttgtctaccagatcaagtggacg
cccctgggagaggggaaggctcacgagatctctgtcccagggaacctcggcacggccatc
ctgcctggcctagggaggcacacggagtacgacgtcaccatcctggcctactacagggac
ggggcccgcagtgaccctgtgtccctccgctataccccctccacagtgaacaggagcccc
ccctccaacctggccctggcctcggagacccccgacagcctgcaggtcagctggacaccc
ccacgtggccgcgtgctccactaccggctcacctacgcgcccgcctctggctcaggaccc
gagaaatccgtctccgtgccaggacccaggagccacgtgacactccccgacctgcaggca
gccaccaagtacagggtcctggtctcagctgtctacgcagcaggcaggagcgaggctgtg
tctgccacaggccagacagcctgcccagccctccgccctgacagctccctcccagggttt
gacctgatggtggccttcggcctggtggaaaaggcttacgcttccatccggggtgtggcc
atggagccctctgccttcggtgggaccccaaccttcacgcttttcaaggacgcccagctg
acaagacgggtcagtgacgtccacccagccccactccctccagagcacaccatcgtcttc
cttgtgcgcctgcttcccgagacgccccgtgaggcctttgcgctgtggcagatgacggcc
gaggacttccagcccgtcctcggggttctgctggacgccgggaggaagtccttgacctac
ttccaccgcgaccccagggctgccttgcaggaggccaccttcgacccgcaggaagtgagg
aagattttcttcgggagcttccacaaggtgcacgtggctgtgggccgctccaaggtcagg
ctctatgtggactgccggaaggtggctgagcggcccctcggggaggtgggcagcgcaccc
tctgccggcttcatcacgctggggaggctggccaaggccaggggcccccggagcagctcg
gccgcgtttcagctccatacactgcagatcgtgtgcggtgacacctgggccgacgaggac
cggtgctgtgaactccctgcctcgagggatggagagacctgcccagccttcgtgtctgcc
tgctcctgttcctcagagacccctgggcccccagggccccagggccccccaggcctccct
gggaggaaaggcactccaggagagcagggcttcccagggcccaggggtccaccaggggtc
aaaggagagaaaggagaccatgggctcccaggcttgcagggccaccccggccaccagggc
atccctgggagagttggcctccagggaccaaagggaatgagaggcctggagggaactgct
ggcctgcccggaccccctggccccagggggttccacggcatggcaggggccaggggcact
agtggagagcgaggagccccaggggccatggggcccacagggctgccggggcccaaaggg
gaacgaggagagaagggcgagccacagtctctcgccaccctctaccagcttgtgagccag
gcctcacacgtgtcaaagtttgactccttccacgagaacaccaggcccccaatgcccatc
ttggagcagaagctggagccgggcactgagcccctggggtcctctggcacccgcagcaaa
gccctgcttcctggagaatgggggcatggtagccgccgcctagggggcagaggtactggg
ctcctggctcttggggagggagttgtggccagcnagggagccagttgtcccctggtcctg
gggctggagcgtcgatctgtgtcagcacagccgcccctgctggagacaccactgtccagc
ctctggggtgctggggtgaggacacggggcttccctgagcccacacaaagccagtcgtga
cgcagaggtcagcctcggcctggccttccaaggccctcaaggtga
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