Rhinopithecus bieti (black snub-nosed monkey): 108535602
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Entry
108535602 CDS
T04641
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04340
Hedgehog signaling pathway
rbb05200
Pathways in cancer
rbb05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108535602 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108535602 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
108535602 (PTCH2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRA2_N
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
108535602
NCBI-ProteinID:
XP_017737176
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MTRSPPLRELXPSYTPPARTAAPQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETNLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTAR
QEGENILTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPPSAPNHHSRQAPNVAHELSGGCHGFSHKFMHWQEELLLG
GMARDPQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFV
QLAQEALPENTSQQIHAFSSTTLDDILHAFSEVSAARVVGGYLLMLAYACVTMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVLPFLALGIGVDDVFLLAHAFTE
ALPGTPLQVGPCPPGLSPNSVLVRTRMGECLQAAQAPGRCTHIHQTWLPFLMVPHSHPAL
RAFSLQSAAIVVGCHLCLLAVMLVFPAILSLDLRRRHCQRLDVLCCFSSPCSARVIQILP
QELGDETVPVGIAHLTATVQAFTHCEASSQHVVTILPPQAHLVPPPSDPLGSEVFSPGGS
TRDLLGQEEEPRQKAACKSLPCAHWNLAHFARYQFAPLLLQSHAKAIVLVLFGALLGLSL
YGATLVQDGLALTDVVPRGTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQ
RFSSLKAVLPPPAAQAPRTWLHYYRSWLQGIQAAFDQDWASGRITRHSYRNGSEDGALAY
KLLIQTGDAQEPLDFSQLTTKKLVDREGLIPPELFYMGLTVWVSSDPLGLAASQANFYPP
PPEWLHDKYDTTGENLRIPPAQPLEFAQFPFLLRGLQKTADFVEAIEGARAACAEASQAG
VHAYPSGSPFLFWEQYLGLRRCFLLAVCILLVCTFLVCALLLLNPWTAGLIVLVLAMMTV
ELFGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNLRAARALEHTFAP
VTDGAISTLLGLLMLAGSHFDFIVRYFFAALTVLTLLGLLHGLVLLPVLLSILGPPPEVI
QIYKESPEVLSPPAPQGGGLRWGPSPSLPQSFARVTTSMTVAIHPPPLPGAYIHSASDEH
PWSPAATSSGNLSSRGPGPATG
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatcgccgcccctcagagagctgnccccgagttacacacccccagctcgaacc
gcagcaccccagatcctagctgggagcctgaaggctccactctggcttcgtgcttacttc
cagggcctgctcttttctctgggctgcgggatccagagacactgtggcaaagtgctcttt
ctgggactgttggcctttggggccctggcattaggtctccgcgtggccattattgagaca
aacttggaacagctctgggtagaagtgggcagccgggtgagccaggagctgcattacacc
aaggagaagctaggagaggaggctgcatacacctctcagatgctgatacagaccgcacgg
caggagggagagaacatcctcacgcccgaagcacttggcctccacctccaggcagccctc
actgccagtaaagtccaagtatcactctatgggaagtcctgggatttgaacaaaatctgc
tacaagtcaggagttccccttattgaaaatggaatgattgagcggatgattgagaagctg
tttccgtgcgtgatcctcactcccctcgactgcttctgggagggagccaaactccaaggg
ggctccgcctacctgcccggccgtccggatatccagtggaccaacctggatccagagcag
ctgctggaggagctgggtccctttgcctcccttgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctacgtggggcggccctgtctacaccctgatgacctccactgc
ccacctagtgcccccaaccatcacagcaggcaggctcccaatgtggctcacgagctgagc
gggggctgccatggcttctcccacaaattcatgcactggcaggaggaactgctgctggga
ggcatggccagagacccccagggacagctgctgagggcagaggccctgcagagcaccttc
ttgctgatgagtccccgccaactgtacgagcatttccggggtgactatcagacgcatgac
attggctggagtgaggagcaggctggcacagtgctacaagcctggcagcggcgctttgtg
cagctggcccaggaggctctgcctgagaacacttcccagcagatccacgccttctcctcc
accaccctggacgacatcctgcatgcgttctctgaagtcagcgctgcccgtgtggtggga
ggctatctgctcatgctggcctatgcctgtgtgacgatgctacgatgggactgcgcccag
tcccagggtgctgtgggccttgccggggtactgctggtggccctggcggtggcctcaggc
cttgggctctgtgccctgcttggcatcaccttcaatgctgccactacccaggtgctgccc
ttcttggctctgggaatcggcgtggatgacgtattcctgctggcgcacgccttcacagag
gctctgcctggcacccctctccaggtgggaccttgtcccccagggctcagtcccaactct
gtcctggtcaggacgcgcatgggcgagtgtctgcaggcggcacaggcaccaggtcgttgt
actcacatccatcaaacatggctgcccttcctcatggtgcctcattcccatcctgcgctg
cgagccttctccctacagtcggcggccatagtggttggctgccacctttgtcttttagcc
gtgatgcttgtcttcccagccatcctcagcctggacctacggcggcgccactgccagcgc
ctcgatgtgctctgctgcttctccagtccctgctctgctcgggtgattcagatcctgccc
caggagctgggggatgagacggttccagtgggcattgcccacctcactgccacagttcaa
gcctttacacactgtgaagccagcagccagcatgtggtcaccatcctgcctccccaagcc
cacctggtgcccccaccttctgacccactgggctctgaggtcttcagccctggagggtcc
acacgggaccttctaggccaggaggaggagccaaggcagaaggcagcctgcaagtccctg
ccctgtgcccactggaatcttgcccattttgcccgctaccagtttgcccccttgctgctg
cagtcacatgccaaggccattgtgctggtgctctttggcgctcttctgggcctgagcctc
tatggagccaccttggtgcaagacggcctggccctgacggatgtagtgccccggggcacc
aaggagcatgccttcctgagcgcccagctcaggtacttctccctgtacgaggtggccctg
gtgacccagggtggctttgactacgcccactcccaacgcgccctctttgatctgcaccag
cgcttcagttccctcaaggcagtgctgcccccaccggccgcccaggcaccccgcacctgg
ctgcactattaccgcagctggctacagggaatccaggctgcctttgaccaggactgggct
tctgggcgcatcacccgccactcgtaccgcaatggctctgaggatggggccctggcctac
aagctgctcatccagactggagacgcccaggagcctctggatttcagccagctgaccaca
aagaagctggtagacagagagggactgattccacccgagctcttctacatggggctgacc
gtgtgggtgagcagtgaccccctgggtctggcagcctcacaggccaacttctacccccca
cctcctgaatggctgcatgacaaatacgacaccacgggggagaaccttcgcatcccacca
gctcagcccttggagtttgcccagttccccttcctgctgcgtggcctccagaagactgca
gactttgtggaggccattgagggggcccgggcagcatgtgcagaggccagccaggctggg
gtgcacgcctatcccagtggctccccgttcctcttctgggagcagtatctgggcctgcgg
cgctgcttccttctggctgtctgcatcctgctggtgtgcacattcctcgtctgtgccctg
ctgctcctcaacccctggacggctggcctcatagtgctggtcctggcgatgatgacggtg
gagctctttggtatcatgggtttccttggcatcaagctgagtgccatccccgtggtgatc
ctcgtggcctctgtaggcatcggtgttgagttcacagtccatgtggctctgggctttctg
accacccagggcagccggaacctgcgggccgcccgtgccctcgagcacacatttgccccc
gtgactgatggggccatctccacattgctgggtctgctcatgcttgctggttcccacttt
gacttcattgtaaggtacttctttgcggcactgacggtgctcacgctcctgggcctcctc
catggacttgtgctgctgcctgtgctgctgtccatcctgggcccgccaccagaggtgata
cagatatacaaggaaagcccagaggtcctgagtccaccagctccacagggaggcgggctt
aggtgggggccatccccctccctgccccagagctttgccagagtgactacctccatgacc
gtggccatccacccaccccccctgcctggtgcctacatccattcagcctctgatgagcat
ccttggtcccctgctgccaccagctctggcaacctcagttccaggggaccaggtccagcc
actgggtga
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