Rhinopithecus bieti (black snub-nosed monkey): 108536273
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Entry
108536273 CDS
T04641
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108536273 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rbb03041
]
108536273 (DDX42)
Enzymes [BR:
rbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108536273 (DDX42)
Spliceosome [BR:
rbb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108536273 (DDX42)
Complex B
108536273 (DDX42)
Complex C
U2 SnRNP specific factors
108536273 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
108536273
NCBI-ProteinID:
XP_017738378
UniProt:
A0A2K6JQ22
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGMVQEEEEDN
LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVASATKGIPGFGNTGNISGAPVTYP
SGGAQGVNNTASGNNSREGTGGGNGKRERYENRGSSRHSHGETGNRHSDSPRHGDGGRHG
DGYRHPESSSRHTDGHRHGENRHGGSVGRHGENRGANDGRNGESRKEACNRESKMEPKME
PKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggtcctggcactaagcgaggatttggctttggaggtttcgcc
atcagtgctgggaaaaaggaggaacccaaactcccacagcagtcccacagtgcctttggg
gcaaccagctcttcttctggatttggaaagtcagctccaccacagcttccttctttctac
aaaattggatctaagcgggccaactttgatgaagaaaatgcctattttgaagatgaggaa
gaagactctagcaatgttgatttaccttacattcctgctgaaaactcaccaactcgccag
caattccattccaagccagtggattctgacagtgatgatgatcccttggaggcattcatg
gctgaagtggaggatcaggcagctagagacatgaagaggcttgaagaaaaggacaaggaa
agaaaaaatgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgatacatggcagaaaacccaactgctggtatggttcaggaggaagaggaagacaat
ctagaatatgatagtgacggaaatccaattgcacctaccaaaaaaataattgatcctctt
ccccccattgatcattcagagattgactatccaccatttgaaaaaaacttttacaatgaa
catgaagagataaccaacctcactccacagcagttaatagatctccgacataagctcaat
cttcgggtctctggtgctgcacctcctagaccaggaagtagctttgctcattttgggttt
gacgagcaacttatgcaccagattcggaaatctgaatacacacagcccactccaatacag
tgtcagggtgtgcctgtggcattgagtggtagagacatgattggtattgccaaaacaggt
agtgggaaaactgcagccttcatatggcccatgttgattcatataatggaccagaaggag
ttggagccaggtgatggaccaattgcagtgattgtgtgtcctaccagggagctttgccag
cagatccatgcagaatgtaagcggtttggaaaagcatataatcttcgatcagtggccgta
tatggaggagggagtatgtgggagcaggccaaggcccttcaggagggggcagagattgtt
gtgtgtaccccaggtcgactgattgatcatgtgaaaaagaaagctaccaatcttcaaaga
gtctcttaccttgtgtttgatgaagcagatcgaatgtttgacatgggatttgagtaccaa
gttcgatccatagcaagtcatgttcgtcctgacaggcagactctcttatttagtgcaact
tttcggaaaaagattgaaaagttggccagagacatcctgatcgaccctattcgagtggtg
cagggagatattggagaggcaaatgaagatgtgacacagattgtggagattctccattcc
ggacctagtaaatggaactggcttacccggcgtctggtagagtttacctcttcagggagt
gtcctcctctttgttactaaaaaagccaatgctgaagagctggcgaataaccttaaacag
gagggtcataatcttgggctgctccatggggatatggatcagagtgagagaaacaaggtc
atttcagactttaagaaaaaggacatcccagtcctggtggccacagatgttgcagcccgt
ggtctggacattccttcaattaagactgtcattaactatgatgtggcacgagacattgat
actcacacgcataggattggccgcacgggaagagcaggtgagaaaggtgtggcctatacc
ctgctcactcccaaggacagcaattttgctggtgacctggtccggaacttagaaggagcc
aatcaacacgtttctaaggaactcctagatctggcaatgcagaatgcctggtttcggaaa
tctcgattcaaaggagggaaaggaaaaaagctgaacattggtggaggaggcctaggctat
agggagcggcctggcctgggctctgagaacatggaccgaggaaataacaatgtaatgagc
aattatgaggcctacaagccttccacaggagctatgggagatcgactaacggcaatgaaa
gcagctttccagtcacagtacaagagtcactttgttgcagccagtttaagtaatcagaaa
gctggaagctctgctgctggggcaagtgggtggactagcgcagggagcttgaattctgtt
ccaactaactcagcacaacagggccataacagtcctgacagccccgttgccagtgccacc
aagggcattccaggctttggcaatactggcaacatcagtggtgcccctgtgacctaccca
tctggtggagcccagggagtcaacaacacagcttcaggaaataacagccgagaagggact
gggggcggcaacgggaagagagagagatatgagaaccggggcagcagccgtcacagtcac
ggagagactggcaatcggcatagcgatagcccacgtcatggagatggtggtcgccatgga
gatggataccgccacccagaaagcagcagccgtcacactgatggccatcggcacggagag
aacagacatggaggaagcgtaggccggcatggggagaaccggggtgcaaatgacggtcgg
aatggggaaagcaggaaagaagcttgtaatcgtgagagcaagatggagcccaagatggaa
cccaaagtggacagcagcaagatggacaaggtggacagcaagacagataagacagctgat
ggctttgctgtcccagagccgcctaaacgcaagaaaagtcgatgggacagttag
DBGET
integrated database retrieval system
