Rhinopithecus bieti (black snub-nosed monkey): 108536911
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Entry
108536911 CDS
T04641
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03265
Virion - Ebolavirus and Lyssavirus
rbb04142
Lysosome
rbb04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
108536911 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108536911 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
108536911 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbb02000
]
108536911 (NPC1)
Transporters [BR:
rbb02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
108536911 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
108536911
NCBI-ProteinID:
XP_017739485
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MSARGLALGLLLLLLCPAQVFSQSCVWYGECGIAYGDKRYNCEYFGPPKPLPKDGYDLVQ
ELCPGFFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELQYFVGQSFANAMYNACRDVEAPSSNDKALGLLCGKD
TDACNATNWIEYMFNKDNGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSC
QDCSIVCGPKPQPPPPPAPWTILSLDAMYVIMWITYMAFLLVFFGAFFAVWCYRKRYFVS
EYTPIDSNIAFSVNASDKGMAWLLTSTLPSSPALPGEASCCDPVSAAFEGCLRRLFTRWG
SFCIRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPVDLWSAPGSQARREKEYFDQHFGPFF
RTEQLIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYNNETVT
LQDICLAPLSPYNTNCTIMSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASL
NDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAW
EKEFINLVRNYKNPNLTISFSAERSIEDELNRESDSDIFTIVISYAIMFLYISLALGHIK
SCRRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGLPLTLIVIEVIPFLVLAVGVDNIF
ILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSLF
AGLAVFIDFLLQITCFVSLLGLDINRQEKNRLDIFCCVRGAEDGTSVQASESCLFRFFKN
SYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQFLSMPDDSYVVDYFKSISQYL
HAGPPVYFVLEEGHDYTSPKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWI
DDYFDWVKPQSSCCRVDNVTDQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFL
SDNPNPKCGKGGHAAYSSAVNILGNGTRVGATYFMTYHTVLQTSTDFIDALKKARLIASN
VTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSA
VIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRV
ERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFL
PVLLSYIGPSVNKAKSCATEERYKGTERERLLNF
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcgcggcctggcccttggcctcctcctgctgctactgtgtccggcgcaggtg
ttttcacagtcctgtgtttggtatggagagtgtggaattgcatatggggacaagaggtac
aattgtgaatattttggcccaccaaaaccattgccaaaggatggatatgacttagtgcag
gaactctgtccgggattcttctttggcaatgtcagtctctgttgtgatgttcagcagctt
cagacactaaaagacaatttgcagctgcctctacagtttctgtccagatgtccatcctgt
ttttataacctactgaacctgttttgtgagctgacatgtagccctcggcagagtcagttt
ttgaatgttacagcaactgaagattatgttgatcctgttacaaaccagacgaaaacaaat
gtgaaagagttgcagtactttgtcggacagagttttgccaatgcaatgtacaatgcctgc
cgggacgtggaggccccctcaagtaatgacaaggccctgggactcctgtgtgggaaggac
actgatgcctgtaatgccaccaactggattgaatacatgttcaataaggacaacggacag
gcaccttttaccatcactcctgtgttttcagattttccagtccatgggatggagcccatg
aataatgctaccaaaggctgtgatgagtctgtggatgaggtcacagcaccgtgtagctgc
caagactgctctattgtctgtggccccaagccccagcccccgcctcctcctgctccctgg
acaatcctcagcttggacgccatgtatgtcatcatgtggatcacctacatggcatttttg
cttgtgttttttggagcattttttgcagtgtggtgctacagaaaacggtattttgtctcc
gagtacactcctattgatagcaatatagccttttctgttaatgcaagtgacaaaggaatg
gcttggctcttaacctccaccctcccttcctctcccgctcttccaggagaggcgtcctgc
tgcgaccctgtcagtgcagcatttgagggctgcttgaggcggctgttcacacgctggggg
tctttctgcatccgaaaccctggctgtgtcattttcttctcgctggtcttcattgctgtg
tgttcgtcgggcctggtgtttgtccgggtcacaaccaatccagttgacctctggtcagcc
cccggcagccaggctcgccgggagaaagagtactttgaccagcactttgggcctttcttc
cggacggagcagctcatcatccgggcccctctcactgacaaacacatttaccagccgtac
ccttcgggagctgatgtaccctttggacctccgcttgacatacagatattgcaccaggtt
cttgacttacaaatagccatcgaaaacattactgcctcttataacaatgagactgtgaca
cttcaagacatctgcttggcccctctctcaccatataacacgaactgcaccattatgagt
gtgttaaattacttccagaacagccattccgtgctggaccacaagaaaggggacgacttc
tttgtgtatgccgattaccacacgcactttctatactgcgtacgggctcctgcctctctg
aatgatacaagtttgctccatgatccttgtctgggtacgttcggtggaccagtgttccca
tggcttgtgctgggaggctatgatgatcaaaactacaataacgccactgcccttgtgatt
accttccctgtcaataactactataatgatacagagaagctccagagggcccaggcctgg
gaaaaagagtttattaatttggtgagaaactacaagaatcccaatctgaccatttccttc
agtgctgaacgaagtattgaagatgaactaaatcgtgaaagtgacagtgatatcttcacc
attgtaattagttatgccatcatgttcctatatatttccctagccttggggcacatcaaa
agctgtcgcaggcttctggtggattccaagatctcattgggcatcgcgggcatcctgatc
gtgctgagctcggtggcttgctccttgggcatcttcagctacattgggttgcccttgacc
ctcattgtgattgaagtcatcccgttcctggtgctggctgttggtgtggacaacatcttc
attctggtgcaggcctatcagagagatgaacgtcttcaaggggaaaccctggatcagcaa
ctgggcagggtcctaggagaagtggctcccagtatgttcctgtcatccttttctgagact
gtagcatttttcttaggagcaatgtctgtgatgccagccgtgcacaccttctctctcttt
gcgggattggcagtcttcattgactttcttctgcagattacctgtttcgtgagtctcttg
gggttagacattaatcgtcaagagaaaaatcggctagacatcttttgctgtgtcagaggt
gctgaagatggaacaagcgtccaggcctcagagagctgtttgtttcgcttcttcaaaaac
tcctattctccacttctgctaaaggactggatgagaccaattgtgatagcaatatttgtg
ggtgttctgtcattcagcatcgcagtcctgaacaaagtagatattggattggatcagttt
ctttcgatgccagatgactcctatgtagtggactatttcaaatccatcagtcagtacctg
cacgcgggtccgcctgtgtactttgtcctggaggaagggcacgactacacttctcccaag
gggcagaacatggtgtgcggtggcatgggctgcaacaatgattccctggtgcagcagata
tttaatgcggcgcagctggacaactatacccgaataggcttcgccccctcatcctggatc
gacgattatttcgactgggtgaagccgcagtcgtcttgctgtcgagtggacaatgtcact
gaccagttctgcaatgcttcagtggttgaccctgcctgcgtccgctgcaggcctctgact
ccggagggcaaacagaggcctcagggtggagacttcatgagattcctgcccatgttcctt
tcggataaccctaaccccaagtgtggcaaagggggacatgctgcctatagttccgcagtt
aacatcctcggcaatggcaccagggtcggagccacgtacttcatgacctaccacaccgtg
ctgcagacctctactgactttattgacgctctgaagaaagcccgacttatagccagtaat
gtcaccgaaaccatgggcattaatggcagtgcctaccgggtatttccctacagtgtgttt
tatgtcttctacgaacagtacctgaccatcattgacgacactatcttcaacctcggtgtg
tccctgggcgcgatatttctggtgaccatggtcctcctgggctgtgagctgtggtctgca
gtcatcatgtgcgccaccatcgccatggtcttggtcaacatgtttggagttatgtggctc
tggggcatcagtctgaatgctgtgtccttggtcaacctggtgatgagctgtggcatctcc
gtggagttctgcagccacataaccagagcgttcacggtgagcacgaaaggcagccgcgtg
gagcgtgcagaagaggcactcgcccacatgggcagctccgtgttcagtggaatcacgctt
acaaaatttggagggattgtggtgttggcttttgccaaatctcaaattttccagatattc
tacttcaggatgtatttggctatggtcttactgggcgccactcacggattaatatttctc
cctgtcttactcagttacatagggccttcagtaaataaagccaaaagttgtgccactgaa
gagcgatacaaagggacagagcgtgagcggcttctaaatttctag
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