Rhinopithecus bieti (black snub-nosed monkey): 108538274
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Entry
108538274 CDS
T04641
Symbol
SLX4
Name
(RefSeq) LOW QUALITY PROTEIN: structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108538274 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rbb04121
]
108538274 (SLX4)
03400 DNA repair and recombination proteins [BR:
rbb03400
]
108538274 (SLX4)
Ubiquitin system [BR:
rbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108538274 (SLX4)
DNA repair and recombination proteins [BR:
rbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108538274 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
108538274
NCBI-ProteinID:
XP_017741759
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MDESDEDFKELCASFFQRVKKHGIKEVSGERKTQNASSNGTQIRRKLKRTKQTATKTKTL
QGPAEKKPPSGSQAPRTKKQGVTKWQASEPALSVNGEAGVLASAPDQPVLWETAQNTQTG
NQQEPSPNLSREETRENAPNSDSQPPPSYLTTAVPSPSKPRTAQLVLERMQQFKRADPER
LRHASKEGSLEAAQEENVAKDPQEEMMARNVFGLGPPAPESDAAVALTLQQEFARVGTSA
HDDSLEEKGLFFCQICQKNLSAMNVTRREQHVNRCLDEAEKALRPSVPQIPECPICGKPF
LTLKSRTSHLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSLPVSSDHGGGLKRRGPASKK
EPRKRRKVDEAPSEDLLVAMALSRSEMEPCAAVPALRLESAFSERIKPEAEKKSRKKKPQ
CXSPLLLVQDSETTGRQIEDRVALLLSEEVELSSTPPLPASRILKEGWERVGQCPPPPEC
KQNFLWEGSALTGAWAMEAFYTARLVPPLMPQRPAQGLMQEPMPPLVPPEHSERRSPALH
GTPTAGCGSRGLSPSASQREHQALQDLMDLAREGLSASPWPSSGGLAGSEGAAGLDVVPG
GLPLTGFVVPSQDKHLERGGRTSLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKF
VLYARCPLLIQYVNNEGFSAVEDGLLTQRVLLGDVSTEAACAFLHYLYTADTGLPPGLSS
ELSSLAHRFGVSELVHLCEQVPVTTDSGGKPWEEKEAENCESRAENFQELLRSMWADEEE
EAETLLKFKDHKEDQENVNEAEMEEIYEFAATQRKLLQEEKAVGAGEDADWLEGGSPVSG
QLLASVQVQERWDKVEEIQPSEPGRDEATTTWEKVGQCPLPPPQDQCSGARGAEASEQEA
LGRSSCSSPSRGCRAERKEGPLPYSDDAGDYEQLFSSTQGESSEPSQVTSEPEERSGAVR
ERGLEVSHRLAPWQVSPPHPCRFLLGPPQGGSPHGSHQPHHTSGLSLSTPRSRGGTSQVG
SPTSLSPAMPSKQKRDRSILMLSKEPGHQKGTERRSMLECRNKGVLMSPEKSLSIDLTQS
NPDHLSSTPQKSSSKVNKEDEVILLLDSDEELELEQTKMKSISSDPLEERKALEISPRSC
ELFSVIDVDADQEPSHSPPRREAALQREDEGALLENRGSLGSRGAPWLFCDRESSPGEGS
TTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVEAVTQHTPRASVGNREGNEAAQKFS
VIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHKSPSRPHPGGHPHSSPLAPRPISGDRAHF
SRRFLKHSPPGPSFLSQTTVSEVVEVGDSDDEQEVASHQANSSPPLDSDPPIPVDDCCWH
MEPLSPIPIDHWNLERTGPLSTSSPSRRMKEATDSCDCRSLGLLDTTPIQGSCAARRKSQ
EKSLGAGSPGNSRLSFLNSALWDDWDGEEQRPPETPPLAQMLSVGGAQKPKGLETPKGVK
RKKDLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSD
SEDESQSSQPLLQAPRCRTLTSQTYKPSRAGAHAQQEATTGPGAHRPKGPAKTKGPRHQR
KHHESIAPAPPSRSPTKEAPPGLDDDAQLPASQESVATSVDGSDSSLSSQSSSSCEFGAA
FESAGEEEEGEEEVSASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELGELQSELK
QNGLRVSSRRLLDFLDTHCITFTTAAARREKLRGRRRWPRGKKKAARN
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgatgaggactttaaagaactctgcgctagctttttccaaagggtgaaa
aaacatggaatcaaggaagtgtcaggagaaaggaagacacaaaacgcctcctcaaacggc
actcagataagacgcaaattgaaaaggaccaaacaaactgctaccaagaccaaaaccctt
caaggccctgcagagaagaaacctccatctggcagccaggcccctaggactaaaaagcaa
ggggtaaccaaatggcaagcaagtgaaccagccctctctgtgaatggggaggcgggtgtg
cttgcctctgctccagatcagcctgtgctctgggaaacagcacaaaacacccagacgggt
aaccagcaagaaccatcgccaaacctttccagagaggaaaccagagagaatgcacccaac
agcgactctcagcctcctccttcctatttgacaacagcagtgccaagtccctccaaaccc
cgcacagcacaattggtcctagagcgaatgcagcagttcaagagagcagaccccgagcgt
ttgagacatgcttcaaaagagggctccctcgaggctgcacaggaagaaaatgtcgcaaaa
gatcctcaagaggagatgatggcgaggaatgtgtttgggcttgggccccctgccccagag
agcgacgctgcggtggccttgaccctgcagcaggagtttgcacgggtaggaacgtcggca
catgatgatagcctggaggaaaagggtttgttcttctgccagatttgtcaaaagaacctc
tcagccatgaacgtgacccgaagggaacagcatgtaaacaggtgcctggatgaagctgaa
aaggcactaagaccttctgtgcctcagatccctgagtgcccgatttgtgggaaaccgttt
cttaccttaaagagcagaaccagccacttgaagcagtgtgctgtgaagatggaggttggc
ccccagctcctgctgcaggccgtgcggctgcagacagcacagcctgaggggagcagcagc
ctgccagtgtccagtgatcacggtggaggtctgaaacggagaggacccgccagcaagaag
gagccacggaagaggcggaaggtggacgaggcaccgtccgaggacctgctggtggccatg
gctctgtcccggtcggagatggagccatgtgcggctgtgccagcactcaggctggaaagt
gccttttctgagaggataaaaccagaagcagagaagaaaagtcgcaagaagaaaccccag
tgtnnctccccattgttgttagtccaggactctgaaaccacaggccgacagatagaggac
cgtgtggccctgctcctctctgaggaagtggaattgtctagcacgccaccacttcctgcc
agcaggattttaaaggaagggtgggaaagagtgggccagtgtcctcctccacctgaatgc
aagcagaactttctgtgggagggcagtgcactgactggggcctgggccatggaggccttc
tacacggccaggctggtccctcccctcatgccccagcggcctgcccagggcctcatgcag
gagcccatgccgccgctggtgccacctgagcactcagagcgaaggtcacccgctcttcac
ggcacccccactgcaggctgtggctctagggggctgtcgccttcggccagccagagggag
caccaggccctgcaggacctcatggacctggcgagggagggactgagcgccagcccgtgg
cccagcagtgggggcctggctggctcggaaggggctgcagggttggacgtggtgcccggc
ggccttcctctgactgggtttgtggtgccatcgcaggacaagcacctggaaaggggcggc
cgcacctcgctctcccttggtctgctggttgctgactttggtgccatggtcaataaccca
cacctgagtgatgtccagttccagacagacagcggggaggtgctttacgcccacaagttc
gtgctttatgcccgatgcccgctcctcatccagtatgtgaacaacgaaggcttctctgct
gtagaggacgggcttctgacccagcgtgtcctgctgggtgacgtgagcaccgaggccgcc
tgcgcattcctgcactatctctataccgcggacactggccttcctcctggcctgagttct
gagctgagttccctggcccacaggtttggtgtgagcgagcttgttcacctgtgcgaacag
gtgcctgtcaccacggactcagggggcaaaccatgggaggagaaggaagccgagaattgc
gaaagcagggccgagaatttccaggaactcttgaggtcaatgtgggcagatgaagaggag
gaagcggagactttgttgaaattcaaggaccacaaagaagatcaagaaaacgtgaatgaa
gcagaaatggaagaaatttatgaattcgcagctactcagcgaaagctgctccaggaagaa
aaagcagtgggtgctggtgaggatgctgactggctggagggtggcagtccggtttctggg
cagctcctagcaagtgtccaggtgcaggaacggtgggacaaggtggaggagatacagccg
tcggagccaggaagagatgaggccaccaccacctgggagaaggtgggacagtgccctctc
ccaccaccccaggaccagtgctcaggggcacggggagcagaggcctccgagcaggaggcg
cttggccgttccagttgctccagcccttccaggggctgccgggcagagagaaaagaaggc
ccccttccgtactcggatgatgccggtgattacgaacagctcttctcatcaactcaggga
gagagctcagagccgtcccaagtaacaagtgagcctgaggaacgaagtggcgctgtcagg
gaaagggggctggaggtttctcatcgcctggctccctggcaggtgtctccaccgcacccg
tgccgcttcctattggggcctccccagggcgggagtccccacgggtctcatcagcctcat
cacacaagtgggttgtccctgtcgacaccccggtcccgcggcggaacttcccaggtgggc
tccccaacctcgctgtctccagctatgccatcaaagcagaaaagggacaggagcatcctc
atgctgtctaaagagccaggccaccagaaaggcacagagcgtcggtccatgctggagtgc
agaaataagggggtcctgatgtccccagaaaaatctctgtccattgacctaacccagtca
aaccctgaccatttgagctccacgcctcagaaatcttcatccaaagtgaacaaagaagac
gaggtcatcctcttactggactccgatgaggagctagagctagaacaaaccaaaatgaag
tccatttctagtgatcctctggaagaaaggaaagctctagaaattagccctaggtcctgt
gagctgttttccgtcattgacgtcgatgcagatcaggagccttcccacagcccaccaaga
agggaagctgcgctgcagcgggaggacgagggggcgctgctggagaaccggggctctttg
ggcagcagaggggctccctggctgttctgtgaccgtgagagcagccccggcgagggcagc
accacagacacctcatggctggtgcccgccaccccgctggccagcagaagccgcgactgt
tcttcccagacccaaatcagcagcctcaggagcgggctggccgtggaggcggtgacacag
cacacgcccagggcctcggtaggaaacagggaagggaacgaggctgcacagaagttttcc
gtcatcaggccccagacaccaccgccccagacaccgtcctcttgcctcactcccgtctct
ccaggaacttctgatggcagaaggcaaggccacaaaagcccttcccgtccccaccctggg
ggccacccgcactcctctccgctggctccacgtcccatctcaggggaccgcgcccacttc
agcaggcggttcctgaaacactctccgcctgggccaagcttcctgagccagaccacagtg
agtgaagtggtggaagtcggggacagtgacgatgagcaggaggtggcctcccatcaggcc
aacagcagtcccccgctggacagtgaccctccaattccagttgacgactgctgctggcac
atggagcccctctcgccaattcccattgatcactggaacctggagcggaccggccccctg
agcaccagcagccccagccgcaggatgaaggaggccaccgacagctgtgactgccgctcc
ctgggactcctggacaccacccccatccaaggaagctgcgctgcccggaggaaatcgcaa
gagaagtccttgggcgcgggttccccggggaacagcaggctgagctttctgaattcggct
ctgtgggacgattgggacggggaagagcagaggcctccagagacccctcctctagcgcag
atgctaagcgtcggtggagctcagaagcccaaagggttagagacacccaaaggtgtaaaa
cggaagaaggacttgccccccaaagtgcccataacaccgatgccacagtattccattatg
gagacgccggtgctgaagaaggaactggataggtttggagtccgccctctgcctaaacgc
cagatggttctgaagctgaaggagatattccagtacactcaccagaccctggactcagac
tctgaggatgagagccagtcctcacagccgctactgcaggcgcctcgctgccggaccctc
acctcccagacctacaagccttcaagggcaggggcccatgcccagcaggaggccaccaca
ggacccggggcccataggcccaagggacctgctaagaccaagggcccccgacatcaaagg
aagcatcatgaaagcatcgcacccgcacccccaagcaggtcgcccaccaaggaggcacct
ccaggccttgatgatgatgcccagctcccagcctcccaggaatccgtggccacttctgtg
gacggcagtgacagctccttgagctcacagagttcttcctcctgtgagtttggagcggca
tttgagtctgcaggtgaagaggaggagggtgaggaggaggtcagcgcctcgcaggcagcc
gtgcaggcggcggacacggacgaggcgctgagatgctacatccgctccaagccggccctg
taccagaaggtgctgctgtaccagccctttgagctgggggagctgcagtcggagctgaag
cagaacggcctccgtgtatcctcgcgcaggctgctggatttcctggacacccactgtatc
accttcaccaccgccgctgcccgcagggagaagctccggggcaggaggcggtggcctcgg
ggcaagaagaaggcggcacggaactga
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integrated database retrieval system
