Rhinopithecus bieti (black snub-nosed monkey): 108538728
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Entry
108538728 CDS
T04641
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04151
PI3K-Akt signaling pathway
rbb04510
Focal adhesion
rbb04512
ECM-receptor interaction
rbb04820
Cytoskeleton in muscle cells
rbb04926
Relaxin signaling pathway
rbb04933
AGE-RAGE signaling pathway in diabetic complications
rbb04974
Protein digestion and absorption
rbb05146
Amoebiasis
rbb05165
Human papillomavirus infection
rbb05200
Pathways in cancer
rbb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108538728 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108538728 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108538728 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108538728 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108538728 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
108538728 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108538728 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
108538728 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108538728 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
108538728 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108538728 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbb04147
]
108538728 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
rbb00536
]
108538728 (COL4A3)
Exosome [BR:
rbb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108538728 (COL4A3)
Glycosaminoglycan binding proteins [BR:
rbb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108538728 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108538728
NCBI-ProteinID:
XP_017742448
UniProt:
A0A2K6M2N7
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MSPRTAPRSQVLLLQLLLVLLAAPPTASKGCVCKDKGQCFCDKAKGEKGERGFPGPPGSP
GQKGFTGPEGLLGPQGPKGSPGLPGLTGPKGVRGVTGLPGFSGSPGLPGTPGNTGPYGLV
GVPGCNGSKGEQGFPGLPGTLGYRGIPGAPGLKGQKGLPGPPGFPGPVGPPGPPGFFGFP
GAMGPRGPKGHMGERVIGQKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGA
IGQPGPPGPSGLPGESYGSEKGAPGDPGPQGKPGKDGVPGFPGSEGVKGNRGFPGLAGED
GIKGQKGDTGPPGFRGPTEYYDTYQEKGDEGIPGPPGPKGGRGPQGPSGPPGVPGSPGSS
RPGLRGAPGWPGLKGSKGERGYPGKEAMGTPGSPGCPGSPGPPGSPGPPGPPGDIIFRKG
PPGDRGLPGYLGSSGIPGIDGPKGEPGLLCIQCPYIPGPPGLPGLPGLHGVKGIPGRQGA
AGLKGSPGSPGNTGLPGIPGFPGAEGDRGLKGEKGETPQPEGQVGAPGDPGLRGQPGRKG
FDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEPGP
QGIQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGMPGSMGKCGDPG
LPGPDGEPGIPGIGFPGRPGPKGDQGFPGTKGSLGCPGKIGEPGLPGKPGVPGAKGEPAV
AMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQGPP
GRCIEGPRGAQGLPGLNGLKGQQGRRGKMGPKGDPGIPGLDRSGFPGETGSPGMSGHQGE
MGPPGQKGYPGNPGLLGPPGEDGVVGMMGFPGATGPPGPPGNPGMPGQRGSLGIPGVKGQ
RGTPGAKGEQGDKGNPGPSQISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGL
PGPAGPPGPRGDLGSIGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGLPGI
HGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGEMGKKGEMGQPGPPGHSGPAGPEGAHGSP
GSPGLPGKPGPHGDLGFKGIKGFPGPPGIKGPSGLPGFPGSPGPMGVRGDQGRDGIPGPA
GEKGEMGLSGAPPGPRGNPGAQGAKGDRGSPGFPGLPGRKGAMGDAGPRGPTGIEGFPGP
PGLPGAIIPGQKGNHGPPGLRGSPGEPGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTVG
DMGPPGHLGAPGTPGLPGLRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPIGPPGIRG
DPGTLRIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGSPGPAG
EKGNKGSKGEPGPPGSDGLPGLKGKRGDSGSPATWTTRGFVFTRHSQTTAIPSCPEGTAP
LYSGFSFLFVQGNERAHGQDLGTLGSCLQRFTTMPFLFCNVNDVCNFASRNDYSYWLSTP
ALMPMNMAPITGRALEPYISRCTVCEGPAIAIAVHSQTTDIPPCPHGWISLWKGFSFIMF
TSAGSEGTGQALASPGSCLEEFRASPFLECHGRGTCNYYSNSYSFWLASLNPERMFRKPI
PSTVKAGELEKIISRCQVCMKKGH
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggacggcgcccagatcgcaggtgctcctgctgcagctcctgctggtgctc
ctggccgcgccgcccacggccagcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgacaaggccaaaggggagaagggggagagaggctttcctgggccccctggttctccc
ggccagaaaggattcacaggtcctgaaggcttgcttggaccacagggacccaagggctct
ccaggacttccaggactcacgggtcccaaaggtgtaaggggagtaactggattgccagga
ttttctggttctcctggacttccaggcaccccaggcaatactgggccttatggacttgtc
ggtgtaccaggatgcaatggttctaagggtgagcaggggtttccaggactcccagggaca
ctgggctaccgagggatcccgggtgctcctggtttgaaaggacaaaagggtttgccaggc
cctccaggttttcctgggcctgttggcccacctggtcctccgggattctttggctttcca
ggagccatgggacctagaggacctaagggtcacatgggtgaaagagtgataggacaaaaa
ggagagcggggtgtgaaagggttaacaggacccccgggaccaccaggaacagttattgtg
accctaactggcccagataacagaacggacctcaagggggaaaagggagacaagggagcc
atcggccagcctggacctcctggaccctcaggactgcctggagaatcatatggatctgaa
aagggtgctcctggagaccccggcccgcagggaaaacccggtaaagacggcgttcctggc
ttccctggaagtgagggagtcaagggcaacaggggtttccctgggttagcaggtgaagat
ggcattaagggacagaaaggggacactggccctccaggatttcgtggtccaacagaatat
tacgacacataccaggaaaagggagatgaaggcattccaggcccaccagggcccaaagga
ggtcgtggcccacaaggtcccagtggtccccccggagttcctggaagtcctggatcctca
aggcctggcctcagaggagcccctggatggccaggcttgaaaggaagtaaaggggaacga
ggctacccaggaaaggaagccatggggactcctgggtccccaggttgtcctggttcacca
ggccctccaggatcaccgggacctccaggaccaccaggtgacatcatttttcgcaagggt
ccacctggagatcgcggactgccaggctatctagggtcttcaggaatcccaggcattgat
gggcccaaaggagaaccaggcctgctgtgtatacagtgcccttatatcccagggcccccc
ggtctcccaggattgccagggttacatggtgtaaaaggaatcccaggaagacaaggtgca
gctggcttgaaaggaagcccagggtccccaggaaatacaggacttccaggaattccaggt
ttcccaggtgccgagggtgaccgaggacttaaaggagaaaaaggtgaaacacctcagcct
gaggggcaagttggtgccccaggggacccggggctcagaggtcaacctgggagaaagggc
ttcgatggaattcctggaactccgggagtgaaaggattaccaggacctaaaggcgaactg
gctctgagtggtgagaagggggaccaaggtcctccaggggatcctggctcccctgggtcc
ccaggacctgcaggaccagctggaccacctggctacggaccccaaggagaacctggtccc
cagggcatacaaggagttcctggagcccctggaccacctggagaagccggtcctagggga
gaactcagtgtttcaacaccagttccaggcccaccaggacctccagggccccctggccat
cctggcccccaaggtccacctggtatgcctggatctatggggaaatgtggagatcctggt
cttccaggacctgatggtgaaccaggaattccgggaattggatttcctgggcgtcctgga
cctaagggagaccaaggttttccgggtacaaaaggatcactgggttgtcctggaaaaata
ggagagcctgggttacctggaaagccaggcgtcccaggagccaagggagaaccagcagta
gccatgcctggaggaccaggaacaccaggttttccaggagaaagaggcaattctggagaa
catggagaaattggactccctggacttccgggtctccctggaactccaggaaatgaaggg
cttgatggaccacgaggagatccagggcagcctggaccacccggagaacaaggaccccca
ggaaggtgcatagagggtcctaggggagcccaaggacttccaggcttaaatggattgaaa
gggcaacaaggcagaagaggtaaaatggggccaaagggagacccaggaattccaggcttg
gatagatcaggatttcctggagaaactggatcaccaggaatgtcaggtcatcaaggcgag
atgggaccaccaggtcaaaaaggatatccaggaaatccaggacttttagggccaccaggt
gaagatggagtggttgggatgatgggctttcctggagccactggccctccggggccccct
gggaacccaggcatgccagggcagagggggagccttggaattccaggagtaaagggccag
agaggaaccccaggagccaagggggaacaaggagataaaggaaaccccgggccttctcag
atatcccacgtaataggggacaaaggagaaccaggtctcaaaggattcgcaggaaatcca
ggtgagaaaggaaacagaggtgttccagggatgccaggtttaaaaggcctcaaaggacta
cctggaccagcaggaccaccaggccccagaggagatttgggcagcattgggaatcctgga
gaaccaggactacgtggtataccaggaagcatggggaacatgggcatgccaggttctaaa
ggaaaaaggggaactttgggattcccaggtcgagcaggaagaccaggcctcccaggtatt
cacggtctccagggagataaaggagagccaggttattcagaaggtacaaggccaggacca
ccgggaccaacgggggatccaggactgccgggtgaaatgggaaagaaaggagaaatgggg
caacctggcccacctggacattcggggcctgctggacctgagggagcccatggaagtcct
ggaagtcctggcctcccaggaaagccaggtcctcatggtgatttgggttttaaaggaatc
aaaggcttcccgggccctccaggaatcaaaggcccttcaggtcttccaggattcccaggg
tctcctggaccaatgggtgtaagaggtgaccaaggacgtgatggaattcctggtccagcc
ggagaaaagggagaaatgggtttatcgggggcccctccaggcccaagagggaacccgggt
gctcaaggagctaaaggagacaggggatccccaggttttcctggcctccctggcagaaaa
ggggccatgggagatgctgggcctcgagggcccacaggcatagaaggattcccagggcca
ccaggtctgcccggtgcaattatccctggccagaaaggaaatcatggtccaccaggctta
agaggaagcccaggtgagcctggtccccctggacctccagggagtcacgtaataggcata
aaaggagacaaagggtctatgggccaccctggcccaaaaggtccacctggaactgtagga
gacatgggaccaccaggtcatctgggagcaccaggtactccaggtcttccaggactcaga
ggtgatcctggattccaggggtttccgggcgtgaaaggagaaaagggtaatcctggattt
ctaggatccattggacctccaggaccaattgggccaataggaccacctggtatacgtgga
gaccctggcacacttaggattatctcccttccaggaagcccagggccacctggcacacct
ggagaaccagggatgcagggcgaacctgggccaccagggccacctggaaacctaggaccc
tgtgggccaagaggtaagccaggcaaggatggaaaaccaggaagtcctggaccagctgga
gaaaaaggcaacaaaggttctaaaggagagccaggaccacctggatcagatggattgcca
ggtttgaaaggaaaacgtggagacagtggatcacctgcaacctggacaacgagaggcttt
gtcttcacccgacacagtcaaaccacagcaatcccttcatgtccagaggggacagcgcca
ctctacagtgggttttcttttctttttgtacaagggaatgaacgagcccacggacaagac
ctcggaactctgggcagctgcctgcagcgatttaccacaatgccgttcttattctgcaat
gtcaatgatgtatgtaatttcgcatctcgaaatgattattcatactggctgtcaacacca
gctctgatgccaatgaacatggctcccattactggcagggcccttgagccttatataagc
agatgcactgtttgtgaaggtcctgcgatcgccatagccgttcacagccaaaccactgac
attcctccatgtcctcatggctggatttctctctggaaaggattttcattcatcatgttc
acaagtgcaggttctgagggcaccgggcaagcactggcctcccctggctcctgcctggaa
gaattccgagccagcccatttctagaatgtcatggaagaggaacgtgcaactactattca
aattcctacagtttctggctggcttcattaaacccagaaagaatgttcagaaagcctatt
ccatcaactgtgaaagctggagaattagaaaaaataataagtcgctgtcaggtgtgcatg
aagaaaggacactaa
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integrated database retrieval system
