Rhinopithecus bieti (black snub-nosed monkey): 108538749
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Entry
108538749 CDS
T04641
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04151
PI3K-Akt signaling pathway
rbb04382
Cornified envelope formation
rbb04510
Focal adhesion
rbb04512
ECM-receptor interaction
rbb04820
Cytoskeleton in muscle cells
rbb04926
Relaxin signaling pathway
rbb04933
AGE-RAGE signaling pathway in diabetic complications
rbb04974
Protein digestion and absorption
rbb05146
Amoebiasis
rbb05165
Human papillomavirus infection
rbb05200
Pathways in cancer
rbb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108538749 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108538749 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108538749 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108538749 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108538749 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
108538749 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
108538749 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108538749 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
108538749 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
108538749 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
108538749 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108538749 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbb04147
]
108538749 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
rbb00536
]
108538749 (COL4A4)
Exosome [BR:
rbb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108538749 (COL4A4)
Glycosaminoglycan binding proteins [BR:
rbb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108538749 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108538749
NCBI-ProteinID:
XP_017742502
UniProt:
A0A2K6KPN1
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MSSLHVVLMRCSFRLTKSLATGPWSLILILFSVQYVYGSGKKYVGPCGGRDCSVCRCVPE
KGSRGPPGPPGPQGPIGPLGAPGPTGLSGEKGMRGDRGPPGTAGDKGDKGPTGVPGFPGL
DGIPGHPGPPGPRGKPGKCGYNGSRGDPGFPGGRGALGPGGPPGHPGEKGEKGNSVFILG
AIKGIQGDRGDPGLPGLPGSWGAGGPAGPTGYPGEPGLVGPPGQPGLPGLKGNPGVGVKG
QMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMIGLPGPPGRKGESGIGAKGE
KGIPGFPGPWGDPGSYGSPGFPGLKGELGLVGDPGLFGFLGPKGDPGDRGHPGPPGVLVT
PPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPG
EAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVTYCSVGNPGPQGIKGKVGPPGGR
GSKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGL
PGKPGASGPPGNKGAKGDVVISRVKGHKGERGPDGPPGFPGQPGSHGLDGHAGEKGDPGL
PGDHEDAIPGDKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGCPGVRGPDGLKG
QKGDTISCNVTYPGRQGPPGFDGPPGPKGFPGPPGAPGLSGSDGHKGRPGTPGTSEIPGP
PGFRGDIGDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGRRGLSGVPG
IKGPRGDPGYPGAEGPAGIPGFPGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPG
LPGDPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPG
PPGPKGPRGLPGFPGFPGERGKPGAEGCPGTKGEPGEKGTSGFPGDQGVRGAKGAIGPPG
DEGEMAIISKKGKPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEK
GQPGPSGHPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGATGPKGNKGDPASH
FGPPGPKGEPGSSGCPGHFGASGDQGLPGVQGPRGSPGRPGPPGSSGPPGCPGDQGMPGL
RGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPP
GPVGMPGLKGERGDPGSPGISPPGPCGEKGLPGPPGRSGPPGPAGATGRAPKDIPDPGPS
GDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGLPGPPGPPGYKGFPGCDGK
DGQKGPMGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPLADADDCPRIPG
LPGVPGLRGPEGAMGLPGMRGPPGPGCKGEPGLDGRRGMDGIPGSPGPPGRKGDTGEDGY
PGGPGPPGPTGDPGPKGFGAGYLSGFLLVLHSQTDQEPTCPLGMPRLWTGYSLLYLEGQE
KAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEAIR
PYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMSPG
SCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVKADLQFSPAPAPDTLKESQAQRQKI
SRCQVCVKYS
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctgcatgtagtactaatgaggtgctccttcagattgaccaagtcattggcc
acaggtccctggtcacttatactcattctcttttctgtacaatatgtatatgggagtgga
aagaaatacgttggtccttgtggaggaagagattgctctgtttgccgctgcgttcctgaa
aaggggtctcggggtccaccaggaccaccagggccacagggtccaattgggcccctggga
gccccaggacccactgggctttcaggagagaaaggaatgagaggggaccgcggccctcct
ggaacagcaggggacaaaggagataagggtccaactggtgttcctggatttccaggttta
gatggcatacctgggcacccagggcctcctggacccagaggcaaacctggtaagtgtggc
tacaatggctcaagaggtgacccagggtttccaggaggaagaggagctcttggtccagga
ggccccccaggccatcctggggaaaagggagaaaaaggaaattcagtgttcattttaggt
gccattaaaggtattcagggagacagaggcgacccaggactgcctggcttaccaggatct
tggggtgcaggaggaccggcaggccccacaggatatcctggagagccagggttagtggga
cctccgggccaaccagggcttccaggtttgaagggaaatcccggtgtgggagtaaagggg
caaatgggagacccgggtgaggttggtcagcaaggttctcctggacccaccctgttggta
gagccacctgacttttgtctctataaaggagaaaagggcataaaaggaattcctggaatg
attggactgccaggaccaccaggacgcaagggagaatctggtatcggggcaaaaggagaa
aaaggcatccctggatttccagggccttggggggatcctggttcctatggatctccaggt
ttcccaggattaaagggagaactaggactggttggagatcctggtctatttggatttctt
ggcccaaagggggatcctggagaccgagggcacccaggaccaccaggtgttttggtgact
ccacctcttccactcaaaggcccaccaggggacccaggattccctggccgctatggagaa
acaggggatgttggaccacctggtcccccaggtctcttgggcagaccaggggaagcctgt
gcaggcatgataggtccccctgggccacaaggatttcctggtcttcctgggcttccagga
gaagctggtattcctgggagacctgattctgctccaggaaaaccagggaagccaggatca
cctggcttgcctggagcaccaggcctgcagggcctcccaggatcaagtgtgacatactgt
agtgttgggaaccctggaccacaaggaataaaaggcaaagtgggtcccccaggaggaaga
ggctcaaaaggagaaaaaggaaatgaaggactctgtgcctgtgagcctggtcccatgggc
ccccctggacctccaggacttcccgggaggcaggggagtaagggagacttggggctccct
ggctggcttggaacaaaaggtgacccaggacctcctggtgctgaaggacctccagggcta
ccaggaaagcctggtgcctccggaccacccggcaacaaaggggcgaagggtgacgtggtc
atatcaagagttaaagggcacaaaggagaaagaggtcctgatgggcccccaggatttcca
gggcagccaggatcacatggtctggatggacatgctggagaaaaaggggatccaggactc
ccaggggatcatgaagatgcgattccaggtgataaaggatttcctggacctctgggtccc
ccgggcaaagcaggacctgtgggccccccgggactgggatttcctggtccaccaggagag
cgaggccacccaggagttccaggctgcccaggtgtgaggggccctgatggcttgaagggt
cagaaaggtgacacaatttcttgcaacgtaacctatcccgggaggcaaggccctccgggt
tttgatggacctccaggtccaaagggatttccaggtcccccaggtgcccctgggctgagc
ggttcagatgggcataaaggcagacctggcacaccaggaacatcggaaataccaggtccc
cctggtttccgtggtgacataggagatccgggttttggaggtgaaaaggggtcctcccct
gttgggcccccaggcccccctgggtcaccaggagtgaatggtcagaaaggaatcccggga
gaccctgcatttggtcacctgggacccccgggaaggaggggtctttcaggagtgccaggg
ataaaaggacccagaggtgatccgggatatccaggggctgaagggccagctggcattcct
ggattcccaggtctcaaaggtcccaaaggcagagagggacatgctgggtttccaggtgtc
ccaggtccacctggccattcctgtgaaagaggtgctccaggaataccagggcaaccggga
ctccctggggatccaggtagcccaggtgctccaggtgggaaaggacagccaggagatgtg
gggcctcctgggccagctggaatgaaaggtctccctggactcccaggacggcctggggca
catggtcccccgggcctcccaggaatcccgggtccctttggggatgatgggctacctggt
cctccaggtccaaaaggcccccgggggctgcctggtttcccaggttttcccggagaaaga
ggaaagcctggtgcagagggatgtcctggcacaaagggagaacccggagagaagggcacg
tctggctttcccggagaccagggagtgagaggggccaaaggagccataggacctcccgga
gatgaaggagaaatggctatcatttccaaaaagggaaaacccggggaacctggacctcct
ggagatgatggattcccaggagaaagaggtgataaaggaactcccgggatgcaagggaga
agaggagagccgggaagatatggaccaccaggatttcacagaggggaacctggtgagaaa
ggtcagccagggccttctggacacccaggccctccaggctcaactggtctaagagggttc
attggttttccaggacttccaggtgaccagggtgagccaggttctccaggtccccctgga
ttttcaggaatcgatggagcaacaggacctaaaggaaacaaaggtgaccctgccagtcac
tttggtccacctggtccaaagggtgagccaggtagctctggatgtccagggcattttgga
gcatctggagaccagggcttgcctggcgttcaagggcccagaggatcacccggaaggcca
ggaccacctggctcctctggaccaccagggtgcccaggtgatcaggggatgcctgggctg
aggggacagccaggagaaatgggagaccctgggccaagaggcctccagggggatccaggg
ataccaggtcctccaggaataaaaggtccctccggatcacctggcctgaacggcttacat
ggattgaagggtcagaaaggaaccaaaggtgcttcaggtttgcatgatgtggggccacct
ggtccagtgggaatgcctgggctaaaaggggagagaggagatcctgggagcccaggaatc
tctcctccaggtccttgtggagaaaaaggtctcccaggtcccccagggagatcaggacca
cctggtcctgcaggtgccacaggaagagcgcctaaggacattcctgacccgggtccatct
ggagatcagggacctcctggtcccgatggcccaagaggagcacctgggcctccaggcctc
cctgggagtgttgacctcctgagaggggagccaggtgactgtggtctaccagggccacca
ggtctccccggcccaccaggccctccaggatacaaaggctttccaggatgtgatggaaaa
gatggccagaaaggaccaatgggattcccagggccgcagggaccacatggatttcctggg
ccacctggagagaagggtttacctggacctccagggagaaaagggcccactggtcttcca
ggtcccagaggtgaaccggggccacttgcagatgcggatgactgtccccgaatcccaggg
cttcctggggtgccaggcctgagaggaccagaaggagccatgggactccctggaatgaga
ggccccccaggaccagggtgcaaaggagagcctgggctggacggcaggaggggcatggat
ggcattcctgggtctcctgggcctcccggacgtaaaggtgacacaggagaagacggctat
cccggaggaccagggcctcctggtcccactggggatcctgggcccaaagggtttggcgct
ggatacctcagtggcttcctactggttctccacagtcagacagaccaggagcccacctgc
cccctgggcatgcccaggctctggactgggtatagtctgttatacctggaaggacaagag
aaagctcacaatcaagaccttggtctggcagggtcttgccttcccgtgtttagcacgctg
ccctttgcctactgcaacatccaccaggtgtgccactatgcccagagaaacgacagatcc
tactggctggccagcgctgcacccctccccatgatgccactctctgaagaggcgatccgc
ccctatgtcagccgctgtgcggtatgcgaggccccggcccaggcggtggcggtgcacagc
caggaccagtccatccccccatgtccgcagacctggaggagcctctggattgggtattca
ttcctgatgcacacaggagctggggaccaaggaggagggcaggccctcatgtcacccggc
agctgcctggaagatttcagagcagcaccattccttgaatgccaaggccggcagggaact
tgccacttttttgcaaatgagtatagcttctggctgacaacagtgaaagcagacttgcag
ttttcccctgctccagcaccagacaccttaaaagaaagccaggcccaacgccagaaaatc
agccggtgccaggtctgtgtgaagtatagctag
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integrated database retrieval system
