Rhinopithecus bieti (black snub-nosed monkey): 108539305
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Entry
108539305 CDS
T04641
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108539305 (DDX60)
Enzymes [BR:
rbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108539305 (DDX60)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
108539305 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108539305
NCBI-ProteinID:
XP_017743380
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search
MERNVFTTFSQQMSQLILNEMPKAEYSSLFNDFVESEFFLIDGDSLLITCICEISFKPGQ
NLHFFYLVERYLVDLISKGGQFTIVFFEDAEYAYFSFPELLSLRTALILHLQKNTTIDVR
TTFSGCLSEEWGSFLEESYPYFLIVADEGLNDLQAHLFNFLIIHSWARKVNVVLSSGQES
DVLRLYAYLLPSMYRHQTFFQKNKQNIKDAYITLLHQLKRFKLSALAPLFGSLKWNNIME
EAHETVSMLTQVWPEGSDIRRVFCVTSCSLSLRMYHRFLGNRAPSAGQETEIQQVNSKCL
TLQEMEDLCKLHCLTVVFLLHLPLSQRACARVVTSHWAKDMTPLLQMCFTAGKNFMRRAE
LDTYSANEMVPNLGFIPMSSFVVDKFAGDILKDLPFLKSDDPIVTSLVKQKEFDELVHWH
SHKPLSDDYDRSKCQFDEKSRDPRVLRSVQKYHVFQRFYGNSLETVSSKIIVTQTIKSKK
DFSGPKSKKAHETKAEIITRENKKRLFAKEEQKEEQKWNALSFSVEEQMKENLHSGIKNL
EDFLKSCKSSSVKLRVEMVGLTACLKAWKEHCRSEEGKTMKDLSIAVQMMKRIHSLMEKY
SEILQEDDRQLIARCLKYLGFDELANSLHPTQDAENDVKVKKRNKYSVGIGPARFQLQYM
GHYLIRDERKDPDPRVQDFIPDTWQRELLDVVDKNESAVIVAPTSSGKTYASYYCMEKVL
KESDDGVVVYVAPTKALVNQVAATVQNRFTKNLPSGEALCGVFTREYRHDALNCQVLITV
PACFEILLLAPHRQNWVKKIRYVIFDEVHCLGGEIGAEIWEHLLVMIRCPFLALSATISN
PEHLTEWLQLVKWYWKQEDKIIENNTASKRHVGHHAGFPKDYLQVKQSYKVRLVLYGERY
NDLEKHVCSIKHDDIHFDHFHPCAALTTDHIERYGFPPDLTLSPRESIQLYDAMFQIWKS
WPRAQELCPENFIHFNNKLVIKKMDARKYEESLKSELTSWIKNGNIEEARMVLQNLSPEA
DLSPENMITMFPLLVEKLRKMEKLPALFFLFKLGAVENAAKSVSTSLKEKQETKRPPKAD
KEAHVMANKLRKVKKSIEKQKIIDEKSQKKNRNVDQSLIHEAEHDNLLKCLEKNLEIPQD
CTYADQKAVDTETLQKVFGRVKFERKGEELKALAERGIGYHHSAMSFKEKQLVEILFRKG
FLRVVTATGTLALGINMPCKSVVFAQNSVYLDALNYRQMSGRAGRRGQDLMGDVYFFDIP
FPKIGKLIKSNVPELRGQFPLSITLILRLMLLASKGDDPEDAKAKVLSVLKHSLLSFKQP
RVMDMLKLYFLFSLQFLVKEGYLDQEGNPMGFAGLVSHLHYHEPSNLVFVSFLVNGLFHD
LCQPTSKGSKRFSQDVMEKLMLVLAHLFGRRYFPPKFQDTHFEFYQSKVFLDDLPEDFSD
ALDEYNMKIMEDFTGFLRIVSKLADMNQEYQLPLSKIKFTGKECEDSQLVSHLMSCKEGR
VAISPFVCLSGNFDDDLLRLETPNHVTLGTIGINRSQAPVLLSQKFDNRGRKMPLNAYAL
DFYKHGSLLGLVQDNRMNEGDAYYLLKDFALTIKSISVSLRELCENEDDNVVLAFEQLST
TFSEKLNKV
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaatgtttttacaacattttcacagcaaatgtcccagttaattttgaatgaa
atgccaaaagctgaatattccagtttattcaatgattttgttgaatctgaattttttttg
attgatggggattcattacttatcacatgtatctgtgagatatcatttaagcctgggcag
aacctccatttcttctatctggttgaacgctatcttgtggatcttattagcaaaggagga
caattcaccatagttttcttcgaggatgctgagtatgcctatttcagcttccctgagctg
ctttctttgagaactgctttaattcttcatcttcagaaaaataccaccattgatgttcga
acaacattttcggggtgcttatcagaagagtggggaagtttcttggaggagagttaccca
tatttcctgatagttgcagatgaaggcctgaacgatctacaagcacaccttttcaacttt
ttaatcattcattcttgggcaaggaaggtcaatgttgtactttcctcagggcaagaatct
gatgttcttcgcctttatgcgtaccttcttccaagcatgtacagacaccagacttttttc
cagaagaataaacagaacattaaagatgcttacataaccctgcttcaccagttgaaaaga
tttaaactttcagcattagcacctctttttggaagtttaaaatggaataatattatggaa
gaggcacacgagactgtatctatgcttacacaagtctggccagaaggatctgacattcgg
cgtgtcttctgtgttacttcatgctcattatctttgagaatgtaccatcgctttttagga
aacagagcgccctccgctggtcaggaaactgagatccaacaggtgaacagtaaatgttta
accctgcaggagatggaagatttgtgtaaactgcattgtctcactgtggtttttctactc
catctgcctctttctcaaagagcttgtgctagagtcgtcacttcccattgggctaaggac
atgacgcctttattacaaatgtgttttactgcaggaaaaaactttatgagaagggctgaa
cttgatacatacagcgccaatgaaatggtgcccaatttgggttttattccaatgtcatct
tttgtggttgataaatttgctggagatattttgaaagatctgccttttctaaagagtgat
gatcctattgttacttcactggttaaacaaaaagaatttgatgaacttgtgcactggcat
tctcataaacccctgagtgatgattatgacaggtccaagtgtcagtttgatgaaaaatct
agagaccctcgtgttcttagatctgtgcaaaagtatcatgttttccaacggttttatggg
aattcattagaaacggtctcctcgaaaatcatcgtgactcaaactattaagtcaaagaag
gattttagtgggcccaagagcaaaaaggcacatgagaccaaggctgaaataattactaga
gagaataagaaaaggttatttgccaaggaagaacaaaaggaagagcaaaagtggaatgct
ttgtcattttctgttgaagagcaaatgaaagagaatttacactctggaataaagaacctg
gaagactttttgaagtcctgtaaaagtagctctgtgaaacttcgggttgaaatggtgggg
ttaactgcttgcttgaaagcctggaaagaacattgccgaagtgaagaaggtaaaaccatg
aaagatttaagtatagctgttcaaatgatgaaaaggatccactccttgatggaaaaatac
tcagaaattttacaagaagatgatcgacaactcatagccagatgccttaagtatttagga
tttgatgagttggcaaattctttacatccaactcaggatgcagaaaatgatgtaaaagtg
aagaaaaggaataaatattcagttggcatcgggccagctcggttccaactgcaatacatg
ggccattatttgatacgagatgagagaaaagacccagatcccagggtccaggattttatt
cctgacacatggcagcgagagctccttgatgttgtggataagaatgagtctgcagtgatt
gttgccccaacatcctcaggcaaaacctatgcttcctactactgcatggagaaagtgctg
aaggagagcgatgacggggtggttgtgtacgttgctcccacaaaggcccttgttaatcaa
gtggcagcaactgttcagaatcgttttacgaaaaatctgccaagtggtgaagctctctgt
ggtgttttcactagggagtatcgtcatgatgccttaaactgtcaggtacttattacagtg
cctgcctgctttgaaattctgctgcttgctcctcatcgccaaaactgggtgaaaaagatc
agatatgttatatttgatgaggttcattgtcttggtggagaaattggagcagaaatctgg
gaacatctccttgtcatgatccgatgtccctttttggctctttcagctactataagtaat
cctgaacatctcactgagtggctacaattggtgaaatggtactggaaacaagaagacaaa
ataattgaaaataatactgcttctaaaagacatgtgggtcatcatgccggctttcccaaa
gactacctgcaagtaaaacagtcatataaagttagacttgtgctctatggagagaggtac
aatgatctagagaagcatgtgtgttcaataaaacatgatgacattcattttgatcatttt
cacccatgtgctgcactaaccacagatcatattgaaaggtatggattccctcctgatctt
accctttcacctcgagaaagtatccagctatatgacgccatgtttcaaatttggaaaagt
tggccccgggcccaggaactgtgcccagaaaacttcattcattttaacaataaattagtc
attaaaaagatggatgctagaaaatatgaagagagtctaaagtcagaattaacaagttgg
attaaaaatggcaacatagaggaggccagaatggtacttcagaatcttagtcctgaagca
gatttgagtccagaaaacatgatcacgatgtttccgcttctagttgaaaaactaaggaaa
atggagaagttacctgcactattttttttattcaagttaggagctgtagaaaacgcagct
aaaagtgtgagcacttccctaaaggaaaagcaggagacaaaaaggcctcccaaggctgat
aaagaagcccatgtcatggctaacaaacttcgaaaagttaaaaaatccatagagaaacaa
aagatcatagatgaaaagagccagaaaaaaaacagaaatgtggatcaaagcctaatacat
gaggctgaacatgataatctgctcaagtgtctagagaagaacctggaaattccacaggac
tgcacatatgctgatcaaaaagcagtggacaccgagactttgcagaaggtatttggtcga
gtaaaatttgaaagaaaaggtgaagaattgaaagccttggcagaaaggggtattggatat
catcacagtgctatgagtttcaaagaaaaacaattagttgaaatcctctttaggaaagga
tttcttagggtggtgacagctactggaacacttgctttaggtatcaacatgccttgtaaa
tctgtggtgtttgctcaaaactcagtctatctggatgccttgaattatagacagatgtct
ggccgtgctggaagaagaggtcaagacctgatgggagatgtatatttctttgatattcca
ttccccaaaataggaaaactcataaaatccaatgttcctgagctgagaggacagttccct
ctcagcataaccctgatcctacgactcatgctgctggcttccaagggagatgacccagag
gatgccaaggcaaaggtgctatcagtgctaaagcattcattgctgtccttcaagcaaccc
agagtcatggacatgttaaaactttacttcttgttttctttgcagttcttggtgaaagag
ggctatttagatcaagaaggtaatcctatggggtttgctggacttgtatcacatttgcat
taccatgaaccttctaatcttgtttttgtcagttttcttgtaaatggccttttccatgat
ctctgtcagccaaccagtaaaggctcaaaacgtttttctcaagacgttatggaaaagcta
atgttagtattggcacatctctttggaagaaggtattttccaccaaagttccaagataca
cacttcgagttttatcaatcaaaggtcttccttgatgatctccctgaggatttcagtgat
gctttagatgagtataacatgaaaattatggaggactttaccggttttctacgaattgtt
tccaaactggctgatatgaatcaggaatatcaactcccattgtcaaaaatcaaattcaca
ggtaaagaatgtgaagactctcaactcgtatctcatttgatgagctgcaaggaaggaaga
gtagcaatttcaccatttgtttgtctgtctgggaactttgatgatgatttgcttcgacta
gaaactccaaaccatgttactctaggcacaatcggtataaatcgctctcaggctccagtg
ctgttgtcacagaaatttgataaccgaggaaggaaaatgccgcttaatgcctatgcactg
gatttctacaaacatggttccttgctaggattagtccaggataataggatgaatgaagga
gatgcttattatttgttgaaggattttgcactcaccattaaatctatcagtgtttccctg
cgtgagctatgtgaaaatgaagatgacaacgttgtcttagcctttgaacagctgagtaca
actttttcggaaaagctaaacaaagtctaa
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