Rhinopithecus bieti (black snub-nosed monkey): 108540512
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Entry
108540512 CDS
T04641
Symbol
SMG1
Name
(RefSeq) serine/threonine-protein kinase SMG1 isoform X1
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108540512 (SMG1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rbb01001
]
108540512 (SMG1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108540512 (SMG1)
Enzymes [BR:
rbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108540512 (SMG1)
Protein kinases [BR:
rbb01001
]
Serine/threonine kinases: Other
PIKK family [OT]
108540512 (SMG1)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108540512 (SMG1)
mRNA cycle factors
Common to processing body (P body) and stress granule
108540512 (SMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMG1
PI3_PI4_kinase
FATC
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
108540512
NCBI-ProteinID:
XP_017745103
LinkDB
All DBs
Position
Unknown
AA seq
3059 aa
AA seq
DB search
MWALSPTVFALLSKNLMIVHSDLAVHFPAIQYAVLYTLYSHCTRHDHFISSSLSSSSPSL
FDGAVISTVTTATKKHFSIILNLLGILLKKDNLNQDTRKLLMTWALEVAVLMKKSETYAP
LFSLPSFHKFCKGLLANTLVEDVNICLQACSSLHALSSSLPDDLLQRCVDVCRVQLVHSG
TRIRQAFGKLLKSIPLDVVLSNNNHTEMQEISLALRSHMSKAPSNTFHPQDFSDVISFIL
YGNSHRTGKDNWLERLFYSCQRLDKRDQSTIPRSLLETDAVLWQWAIWEAAQFTVLSKLR
TPLGRAQDTFQTIEGIIRSLAAHTLNPDQDVSQWTTADNDEGHGNNQLRLVLLLQYLENL
EKLMYNAYEGCANALTSPPKVIRTFFYTNRQTCQDWLTRIRLSIMRVGLLAGQPAVTVRH
GFDLLTEMKTTNLSQGNELEVTIMMVVEALCELHCPEAIQGIAVWSSSIVGKNLLWINSV
AQQAEGRFEKASVEYQEHLCAMTGVDCCISSFDKSVLTLANAGRNSASPKHCLNGESRKT
VLSKPTDSSPEVINYLGNKACECYISVADWAAVQEWQNAIHDLKKSTSSTSLNLKADFNY
IKSLSSFESGKFVECTEQLELLPGENINLLAGGSKEKIDMKKLLPNMLSPDPRELQKSIE
VQLLRSSVCLATALNPIEQDQKWQSITENVVKYLKQTSRISVGPLRLSTLTVSQSLPVLS
TLQLYCSSALENTVSNRLSTEDCLIPLFSEALRSCKQHDVRPWMQALRYTMYQNRLLEKI
KEQTVPIRSHLMELGLTAAKFARKRGNVSLATRLLAQCSEVQLGKTTTAQDLVQHFKKLS
TQGQVDEKWGPELDIEKTKLLYTAGQSTHAMEMLSSCAISFCKSAKAEYAVAKSILTLAK
WIQAEWKEISGQLKQVYRAQHQQNFTGLSTLSKNILTLIELPSVNTMEEEYPRIESESTV
HIGVGEPDFILGQLYHLSSVQAPEVAKSWAALASWAYRWGRKVVDNASQGEGVRLLPREK
SEVQNLLPDTITEEEKERIYGILGQAVCRPAGIQDEDITLQITESEDNEEDDMVDVIWRQ
LISSCPWLSELDESATEGVIKVWRKVVDRIFSLYKLSCSAYFTFLKLNAGQIPLDEDDPR
LHLSHRAEQSTDDVIVMATLRLLRLLVKHAGELRQYLEHGLETTPTAPWRGIIPQLFSRL
NHPEVYVRQSICNLLCRVAQDSPHLILYPAIVGTISLSSESQASGNKFSTAIPTLLGNIQ
GEELLVSECEGGSPPASQDSNKDEPKSGLNEDQAMMQDCYSKIVDKLSSANPTMVLQVQM
LVAELRRVTVLWDELWLGVLLQQHMYVLRRIQQLEDEVKRVQNNNTLRKEEKIAIMREKH
TALMKPIVFALEHVRSITAAPAETPHEKWFQDNYGDAIENALEKLKTPSNPAKPGSSWIP
FKEIMLSLQQRAQKRASYILRLEEISPWLAAMTNTEIALPGEVSARDTVTIHSVGGTITI
LPTKTKPKKLLFLGSDGKSYPYLFKGLEDLHLDERIMQFLSIVNTMFATINRQETPRFHA
RHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQKAQDSYQTPQNPGIVPRPS
ELYYSKIGPALKTVGLSLDVSRRDWPLHVMKAVLEELMEATPPNLLAKELWSSCTTPDEW
WRVTQSYARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFEKGKIKVNFTF
MRAKCFLVKGQKYNDLSFQGKSLRVPEKVPFRMTQNIETALGVTGVEGVFRLSCEQVLHI
MRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAESKQSKREMEREITRSL
FSSRVAEIKVNWFKNRDEMLIVLPKLDSSLDEYLSLQEQLTDVEKLQGKLLEEIEFLEGA
EGVDHPSHTLQHRYSEHTQLQTQQRAVQEAIQVKLNEFEQWITHYQAAFNNLEATQLASL
LQEISTQMDLGPPSYVPATAFLQNAGQAHLISQCEQLEGEVGALLQQRRSVLRGCLEQLH
HYATVALQYPKAIFQKHRIEQWKTWMEELICNTTVERCQELYRKYEMQYAPQPPPTVCQF
ITATEMTLQRYAADINSRLIRQVERLKQEAVTVPVCEDQLKEIERCIKVFLHENGEEGSL
SLASVIISALCTLTRRNLMMEGAASSAGEQLVDLTSRDGAWFLEELCSMSGNVTCLVQLL
KQCHLVPQDLDIPNPMEASETVHLANGVYTSLQELNSNFRQIIFPEALRCLMKGEYTLES
MLHELDGLIEQTTDGVPLQTLVESLQAYLRNAAMGLEEETHAHYIDVARLLHAQYGELIQ
PRNGSVEETPKMSAGQMLLVAFDGMFAQVETAFSLLVEKLNKMEIPIAWRKIDIIREARS
TQVNFFDDDNHRQVLEEIFFLKRLQTIKEFFRLCGTFSKTLSGSSSLEDQNTVNGPVQIV
NVKTLFRNSCFSEDQMAKPIKAFTADFVRQLLIGLPNQALGLTLCSFISALGVDIIAQVE
AKDFGAESKVSVDDLCKKAVEHNIQIGKFSQLVMNRATVLASSYDTAWKKHDLVRRLETS
ISSCKTSLQRVQLHIAMFQWQHEDLLINRPQAMSVTPPPRSAILTSMKKKLHTLSQIETS
IATVQEKLAALEASIEQRLKWAGGANPALAPVLQDFEATIAERRNLVLKESQRASQVTFL
CSNIIHFESLRTRTAEALNLDAALFELIKRCQQMCSFASQFNSSVSELELRLLQRVDTGL
EHPIGSSEWLLSAHKQLTQDMSTQRAIQTEKEQQIETVCETIQNLVDNIKTVLTGHNRQL
GDVKHLLKAMAKDEEAALADGEDVPYENSVRQFLGEYKSWQDNIQTVLFTLVQAMGQVRS
QEHVEMLQEITPTLKELKTQSQSIYNNLVSFASPLVTDATNECSSPTSSATYQPSFAAAV
RSNTGQKTQPDVMSQNARKLIQKNLATSADTPPSTIPGTGKSVACSPKKAVRDPKTGKAV
QERNSYAVSVWKRVKAKLEGRDVDPNRRMSVAEQVDYVIKEATNLDNLAQLYEGWTAWV
NT seq
9180 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgctatctccaactgtctttgcacttctgagtaagaatctgatgattgtgcac
agtgacctggctgttcacttccctgccattcagtatgctgtgctctacacattgtattct
cattgtaccaggcatgatcactttatctctagtagcctcagttcttcctctccttctttg
tttgatggagccgtgattagcactgtaactacggctacaaagaaacatttctcaattata
ttaaatcttctgggaatattacttaagaaagataaccttaaccaggacacgaggaaactg
ttgatgacttgggctttggaagtagctgttttaatgaagaagtccgaaacatatgcacct
ttattctctcttccgtctttccataaattttgcaaaggccttttagccaacactctcgtt
gaagatgtgaatatctgtctgcaggcatgcagcagtctacatgctctgtcctcttccttg
ccagatgatcttttacagagatgtgttgatgtttgccgtgttcaactagtgcacagtgga
actcgtattcgacaagcatttggaaaactgttgaaatcaattcctttagatgttgtccta
agcaataacaatcacacagaaatgcaagaaatttctttagcattaagaagtcacatgagt
aaagcaccaagtaacacattccacccccaagatttctctgatgttattagttttattttg
tatgggaactctcatagaacagggaaggacaattggttagaaagactgttctatagctgc
cagagactggataagcgtgaccagtcaacaattccacgcagtctcctggagacagatgct
gtcctttggcagtgggccatatgggaagctgcacaattcactgttctttctaagctgaga
accccactgggcagagctcaagacaccttccagacaattgaaggtatcattcgaagtctt
gcagctcacacgttaaaccctgatcaagatgttagtcagtggacaactgcagacaatgat
gaaggccatggtaacaaccagcttaggcttgttcttcttctgcagtatctggaaaatctg
gagaaattaatgtataatgcatatgagggatgtgctaatgcattaacatcacctcccaag
gtcattagaacttttttctataccaatcgccaaacttgtcaggactggctaacacggatt
cgactctccatcatgagggtaggattgttggcaggccagcctgcagtgacagtgagacat
ggctttgacttgcttacagagatgaaaacaaccaatctatctcaggggaatgaattggaa
gtaaccattatgatggtggtagaagcactatgtgaacttcattgtcctgaagctatacag
ggaattgctgtctggtcatcatctattgttggaaaaaatcttctgtggattaactcagtg
gcgcaacaggctgaagggaggtttgaaaaggcctctgtggagtaccaggaacacctgtgt
gctatgacaggtgttgattgctgcatttccagctttgacaaatcggtgctcaccttagcc
aatgctgggcgtaacagtgccagcccgaaacattgtctgaatggtgaatccagaaaaact
gtgctgtccaaaccgactgactcttcccctgaggttataaattatttaggaaataaagca
tgtgagtgctacatctcagttgccgattgggctgctgtacaggaatggcagaacgctatc
catgacttgaaaaagagtaccagtagcacttccctcaacctgaaagctgacttcaactat
ataaaatcattaagcagctttgagtctggaaaatttgttgaatgtaccgagcaattagaa
ttgttaccaggagaaaatatcaatctacttgctggaggatcaaaagaaaaaatagacatg
aagaaactgcttcctaacatgttaagtccagatccaagggaacttcagaaatccattgag
gttcagttgttaagaagttctgtttgtttggcaactgctttaaacccgatagaacaagat
cagaagtggcagtctataactgaaaatgtggtaaagtatttgaagcaaacatcccgcatc
tctgttggacctctgagactttctactctaacagtttcgcagtctttgccagttctaagt
accttgcagctatattgctcatctgctttggagaacacagtttctaacagactttcaaca
gaggactgtcttattccactcttcagtgaagctttacgttcatgtaaacagcatgatgta
aggccatggatgcaggcgttaaggtatactatgtaccagaatcggttgttggagaaaatt
aaagaacaaacagtcccaattagaagccatcttatggaattaggtctaacagcagcaaaa
tttgctagaaaacgagggaatgtgtcccttgcaacaagactgctggcacagtgcagtgaa
gttcagctgggaaagaccaccactgcacaagatttagtccaacattttaaaaaactatca
acccaaggtcaagtggatgaaaaatgggggcccgaacttgatattgagaaaacaaaattg
ctatatacagcaggccagtcaacgcatgcaatggaaatgttgagttcttgtgccatatct
ttctgcaagtctgcgaaagctgaatatgcagttgctaagtcaattctgacactggctaaa
tggatccaggcagaatggaaagagatttcaggacagctgaaacaggtttacagagctcag
caccaacagaacttcacaggtctttctactttgtctaaaaacatactcactttaatagaa
ctgccatctgttaatacgatggaagaagagtatcctcggatcgagagtgaatctacagtg
catattggagttggagaacctgacttcattttgggacagttgtatcacctatcttcagta
caggcacctgaagtagccaaatcttgggcagcgttggccagctgggcttacaggtggggc
agaaaggtggttgacaatgccagtcagggagaaggtgttcgtctgttgcctagagaaaaa
tctgaagttcagaatctgcttccagacactataactgaggaagagaaagagagaatatat
ggtattcttggacaggctgtatgtcggccagcagggattcaggatgaagatataaccctt
cagataacagagagtgaagataatgaagaagatgacatggttgatgttatctggcgtcag
ttgatatcaagctgcccatggctttcagaacttgatgaaagtgcaactgaaggagttatt
aaagtgtggaggaaagttgtagatagaatattcagcctatacaaactctcttgcagtgca
tactttactttccttaaactcaacgctggtcaaattcctttagatgaggatgaccctcgg
ctgcatttaagtcacagagcggaacagagcactgatgacgtgatcgtgatggccacattg
cgcctgctacggttgcttgtgaagcacgctggtgagcttcggcagtatctggagcacggc
ttggagacaacacccaccgcaccgtggagaggaattattccgcaacttttctcacgctta
aaccaccctgaagtgtatgtgcgccaaagtatttgtaaccttctctgccgcgtggctcaa
gattccccacatctcatattgtatcctgcaatagtgggtaccatatcgcttagtagtgaa
tcccaggcttcaggaaataaattttccactgcaattccaactttacttggcaatattcaa
ggagaagaattgctggtttctgaatgtgagggaggaagtcctcctgcatctcaggatagc
aataaggatgaacctaaaagtggattaaatgaagaccaagccatgatgcaggattgttac
agcaaaattgtagataagctgtcctctgcaaatccaaccatggtgttacaggttcagatg
ctcgttgctgaactgcgcagggtcactgtgctctgggatgagctctggctaggagttctg
ctgcaacaacacatgtatgtcctgagacgaattcagcagctcgaagatgaggtcaagaga
gtccagaacaacaacaccttacgcaaagaagagaaaattgcaatcatgcgggagaagcac
acagctttgatgaagcccatcgtatttgctttggagcacgtgaggagtatcacagcggct
cctgcagaaacacctcatgaaaaatggtttcaggataactatggtgatgccattgaaaat
gccctggaaaaactgaagacaccatcgaaccctgcaaagcctgggagcagctggattcca
tttaaagagataatgctaagtttgcaacagagagcacagaaacgtgcaagttacatcttg
cgtcttgaagaaatcagtccatggttggctgccatgactaacactgaaattgctcttcct
ggggaagtctcagccagagacactgtcacaatccatagtgtgggcggaaccatcacaatc
ttaccgactaaaaccaagccaaagaaacttctctttcttggatcagacgggaagagctat
ccttatcttttcaaaggactggaggatttacatctggatgagagaataatgcaattccta
tctattgtgaataccatgtttgctacaattaatcgccaagaaacaccccggttccatgct
cgacactactctgtaacaccactaggaacaagatcgggactaatccagtgggtagatgga
gccacacccttatttggtctttacaaacgatggcaacaacgggaagctgccttacaagca
caaaaggcccaagattcctaccaaactcctcagaatcctggaattgtaccccgtcctagt
gaactttattacagtaaaattggccctgctttgaaaacagttgggcttagcctggatgta
tcccgtcgggattggcctcttcatgtaatgaaggctgtattggaagagttaatggaggcc
acacccccaaatctccttgccaaagagctctggtcatcttgcacaacgcctgatgaatgg
tggagagttacacagtcttatgcaagatctactgcagtcatgtctatggttggatacata
attggccttggagacagacatctggataacgttctcatagatatgacgactggagaagtt
gttcacatagattacaatgtttgctttgaaaaaggtaaaataaaagtaaactttacattt
atgagggccaaatgttttttggtgaaagggcaaaaatataatgatttgtcttttcaaggt
aaaagccttagagttcctgagaaagtaccttttcgaatgacacaaaacattgaaacagca
ctgggtgtaactggagtagaaggtgtatttaggctttcatgtgagcaggttttacacatt
atgcggcgtggcagagaaaccctgctgacgctgctggaggcctttgtgtatgaccctctg
gtggactggacggcaggaggcgaggccgggtttgctggtgctgtctatggtggaggcggc
cagcaggccgagagcaagcagagcaagagagagatggagcgagagatcacccgcagcctg
ttttcttccagagtagctgagattaaggtgaactggtttaagaatagagatgagatgctg
attgtgcttcccaagttggacagtagcttagatgaatacctaagcttgcaggagcaactg
acagatgtggaaaaactgcagggcaaactactggaggaaatagagtttctagaaggagct
gaaggggtggatcatccttctcacactctgcaacacaggtattctgaacacacccaacta
cagactcagcaaagagctgttcaggaagcaatccaggtgaagctgaatgagtttgaacaa
tggataacacattatcaggctgcattcaataatttagaagcaacacagcttgcaagcttg
cttcaagagataagcacacaaatggaccttggtcctccaagttacgtgccagcaacagcc
tttctgcagaatgctggccaggcccacttgattagccagtgcgagcagctggagggggag
gttggtgctctcctgcagcagaggcgctctgtgctccgtggctgtctggaacaactgcat
cactatgcaaccgtggctctgcagtatccaaaggccatatttcagaagcatcgaattgaa
cagtggaagacctggatggaagagctcatctgtaacaccacagtagagcgttgtcaagag
ctctacaggaaatatgaaatgcagtatgctccccagccacccccaacagtgtgtcagttc
atcactgccactgaaatgaccctgcagcggtatgcagcagacatcaacagcagacttatt
agacaagtggaacgcttaaaacaggaagctgtcactgtgccagtttgtgaagatcagttg
aaagaaattgaacgttgcattaaagttttccttcatgagaatggagaagaaggatctttg
agtctagcaagtgttattatttctgccctttgtacccttacaaggcgtaacctgatgatg
gagggtgcagcgtcaagtgctggagaacagctggttgatctgacttctcgggatggagcc
tggttcttggaggaactctgcagcatgagcggaaacgtcacctgcttggttcagttactg
aagcagtgccacctggtgccacaggacttagacatcccgaaccccatggaagcgtctgag
acagttcacttagccaatggagtgtatacctcacttcaggaattgaattcaaatttccgg
caaatcatatttccagaagcacttcgatgtttgatgaaaggggaatacacgttagaaagt
atgctgcatgaactggacggtcttattgagcagaccaccgatggcgttcccttgcagact
ctagtggaatctcttcaggcctacttaagaaatgcagctatgggactggaagaagaaaca
catgctcattacatcgatgttgccagactactacatgctcagtatggtgaattaatccaa
ccaagaaatggttcagttgaagaaacacccaaaatgtcagctggccagatgcttttggta
gcattcgatggcatgtttgctcaagttgaaactgctttcagcttattagttgaaaagttg
aacaagatggaaattcctatagcttggcgaaagattgacatcataagggaagccaggagt
actcaagttaatttttttgatgatgataatcaccggcaggtgctagaagagattttcttt
ctaaaaagactacagacgattaaggagttcttcaggctctgtggtaccttttctaaaaca
ttgtcaggatcaagttcacttgaagatcagaatactgtgaatgggcctgtacagattgtc
aatgtgaaaaccctttttagaaactcttgtttcagtgaagaccaaatggccaaacctatc
aaggcattcacagctgactttgtgaggcagcttttgataggactacccaaccaagccctc
ggactcacactgtgcagttttatcagtgctctgggtgtagacatcattgctcaagtagag
gcaaaggactttggtgccgaaagcaaagtttctgttgatgatctctgtaagaaagcggtg
gaacataacatccagattgggaaattctctcagttggttatgaacagggcaaccgtgtta
gcaagttcttatgacactgcctggaagaagcatgacttggtgcgaaggctggaaaccagt
atttcttcttgtaagacaagcctgcagcgagttcagctgcatattgccatgtttcagtgg
caacatgaagatctacttatcaatagaccacaagccatgtcagtcacacctcccccacgg
tctgctatcctaaccagcatgaaaaagaaactgcataccctgagccaaattgaaacttct
attgcaacagttcaggagaagctagcagcacttgaagcaagtattgaacagcgactcaag
tgggcaggtggtgccaaccctgcattggcccctgtactacaagattttgaagcaacgata
gctgaaagaagaaatcttgtccttaaagagagccaaagagcaagtcaggtcacttttctg
tgcagcaatatcattcattttgaaagtttacgaacaagaactgcagaagccttaaacctg
gatgcggcgttatttgaactaatcaagcgatgtcagcagatgtgttcatttgcatcacag
tttaacagttcagtgtctgagttagagcttcgtttattacagagagtggacactggtctt
gaacatcctattggcagctctgaatggcttttgtcagcacacaaacaattgacccaggat
atgtctactcagagggcaattcagacagagaaagagcagcagatagaaacggtctgtgaa
acaattcagaatctggttgataatataaagactgtgctcactggtcataaccgacagctt
ggagatgtcaaacatctcttgaaagctatggctaaggatgaagaagctgctctggcggat
ggtgaagatgttccctatgagaacagtgttaggcagtttttgggtgaatataaatcatgg
caagacaacattcaaacagttctgtttacattagtccaggctatgggtcaggttcgaagt
caggaacatgttgaaatgctccaggaaatcactcccaccttgaaagaactgaaaacacaa
agtcagagtatctataataatttagtgagttttgcatcacccttagtcaccgatgcaaca
aatgaatgttcgagtccaacgtcatctgccacttatcagccatcctttgctgcagcagtc
cggagtaacactggccagaagactcagcctgatgtcatgtcccagaatgctagaaagctg
attcagaaaaatcttgccacatcagctgatactccaccaagcaccattccaggaactggc
aagagtgttgcttgtagtcctaaaaaggcagtcagagaccctaaaactgggaaagcggtg
caagagagaaactcctatgcagtgagtgtgtggaagagagtgaaagccaagttagagggc
cgagatgttgatccgaataggaggatgtcagttgctgaacaggttgactatgtcattaag
gaagcaactaatctagataacttggctcagctgtatgaaggttggacagcctgggtgtga
DBGET
integrated database retrieval system
