Rhinopithecus bieti (black snub-nosed monkey): 108541217
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Entry
108541217 CDS
T04641
Symbol
CIITA
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04612
Antigen processing and presentation
rbb05145
Toxoplasmosis
rbb05152
Tuberculosis
rbb05164
Influenza A
rbb05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
108541217 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
108541217 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
108541217 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
108541217 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
108541217 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rbb01001
]
108541217 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rbb04054
]
108541217 (CIITA)
Enzymes [BR:
rbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108541217 (CIITA)
Protein kinases [BR:
rbb01001
]
Serine/threonine kinases: Other
TAF1 family
108541217 (CIITA)
Pattern recognition receptors [BR:
rbb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108541217 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
108541217
NCBI-ProteinID:
XP_017746153
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MNNFQAILTQVRILLSSHQPGQVQALLDNLLKEELLSREYHCTLLHEPDSDALARKISLT
LLEKGDLDLALLGWARSGLQPPAAERGPSHSDHDGSSQCATMELGPLEGSYLELLNSDAD
PLCLYHIYDQMDLAGEEEIELYSEPDTDTINCDQFSRLLCDMEGDEETKEAYANIAELDQ
YVFQDSQLEGLSKDIFKHIGPDEVIGDSMEMPAEVGQKSQKRPFPEELPADLKHWKPAEP
PAVVTGSFLVGPVSSSSTLPCLPLPALFNQEPASSRMCLEETHQMPMPSSSSSLSCLNLP
EGPVQFVPTVSTLPQGLWQISGTGTGVSSIFIYHGEVPQASQVPPPSGLTVHGLPTSPDR
PGSTSPFAPSATDLPSMPEPALTSRANVTEHKTSPTQCQAAGEVSNKLPKWPEPVEQFYR
SLQDTYQAEPAGPDGILMEVDLVQARLERSSSKSLERELATPDWAERQLAQGGLAEGLLA
AKERRRPRETQVIAMLGKAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDVY
RLQDLLFSLGPRPLLAADEVFSHIVKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEPC
SLRGLLAGLFQKKLLRGCTLLLTARPRGRLVQNLSKADALFELSGFSMEQAQAYVMRYFE
CSGMTEHQDRALALLRDRPFLLSHSHSPTLCRAVCQLLEALLELGEDAELPSTLTGLYVG
LLGRAALSGPPGALAELAKLAWELGRRHQSTLQEDQFPSADVRTWAMAKGLVQHPPGATE
SELAFPSFLLQCFLGALWLTLSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLTGLIF
QPRARCLGALVGPSVTALADRKQKVLARYLKRLQPGTLRARQLLELLHCTHEAEEAGIWQ
HVVQELPARLSFLGTRLTPPDAHVLGKALEAAGQDFSLDLRSTGIDPSGLGSLVGLSCVT
HFRAALSDTVALWESLRQHGETELLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSS
SEDTAGELPAVRDLKKLEFALGPISGPXAFPKLVQILTAFSSLQHLDLDALSENKIGDEG
VSQLSATFPXLKSLETLNLSQNSITDLGAYKLAEGLPSLAASLLRLSLYNNCICDMGAES
LARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFSVQEHLQQQ
DSRISLR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttccaggccatcctgactcaggtgcgaatactgctctccagccatcagccc
ggccaggtgcaggcactcttggacaacctgctgaaggaggagctcctctccagggaatac
cactgcaccctgctccatgagcctgatagtgacgctctggccaggaagatctctttgacc
cttctagagaaaggagacctggacttggccctcctggggtgggctcggagtgggctgcag
cccccagcagccgagaggggccccagccacagtgaccatgatggcagctcacagtgtgcc
accatggagttggggcccctagaaggcagctacctggagcttctcaacagcgatgctgac
cccctgtgcctctaccacatctatgaccagatggacctggctggagaagaagagattgag
ctctactcagaacccgacacggacaccatcaactgcgaccagttcagcaggctgttgtgt
gacatggaaggcgatgaagagaccaaggaggcttatgccaatatcgcggaactggaccag
tatgtgttccaggactcccagctggagggcctgagcaaagacattttcaagcacatagga
ccagatgaagtgatcggtgacagtatggagatgccagcagaagttgggcagaaaagtcag
aaaagacccttcccagaggagcttccggcagacctgaagcactggaagccagctgagccc
ccagctgtggtgactggcagtttcctagtgggaccagtgagcagctcctccaccctgccc
tgcctgccactgcctgctctgttcaaccaggagccagcctccagccggatgtgcctggag
gaaacccatcagatgcccatgccttcctctagttcctcgttgagctgcctgaatctccct
gagggacccgtccagtttgtccccaccgtctccactctgccccaggggctctggcaaatc
tctgggactggaacaggggtctccagtatattcatctaccacggtgaggtgccccaggcc
agccaagtaccccctcccagtggactcactgtccatggcctcccgacatctccagaccga
ccaggctccaccagccccttcgctccatcagcaactgacctgcccagcatgcctgaacct
gccctgacctcccgagcaaacgtgacagagcacaagacgtcccccacccaatgccaggca
gctggagaggtctccaacaagcttccaaaatggcctgagccggtggagcagttctaccgc
tcactgcaggacacgtatcaggccgagcctgcaggccccgatggcatcctgatggaggtg
gacctggtgcaggccaggctggagaggagcagcagcaagagcctggagcgggaactggcc
accccggactgggcagaacggcagctggcccaaggaggcctggctgaggggctgctggct
gccaaggagcgccggaggccgcgtgagacacaagtgattgctatgctgggcaaagctggt
cagggcaagagctattgggctggggcagtgagccgggcctgggcttgtggccggcttccc
caatacgactttgtcttctctgtgccctgccactgcttgaaccgtccgggggatgtctac
cgcctgcaggacctgctcttctccctgggcccacggccactcctggcagccgatgaggtt
ttcagccacatcgtgaagagacctgaccgcgttctgctcatcctagatgcctttgaggag
ctggaagcgcaagacggcttcctgcacagcacatgtggacccgcaccggccgagccctgc
tccctccggggactgctagctggccttttccagaagaagctgctccgaggttgcaccctc
ctcctcacagcccggccccggggtcgcctggtccagaacctgagcaaggccgacgccctg
tttgagctgtccgggttctccatggagcaggcccaagcctatgtgatgcgctactttgag
tgctcagggatgaccgagcaccaagacagagccctggcactcctccgggaccggccattt
cttctcagtcacagccatagccccactttgtgccgggcagtgtgccagctcttagaggcc
ctactggagcttggggaggacgccgagctgccctccacgctcacgggactctatgtcggc
ctgctgggccgtgcagccctcagcggccccccgggggccctggcagagctggccaagttg
gcctgggagctgggccgcagacaccaaagtaccctacaggaggaccagttcccatctgca
gacgtgaggacctgggcgatggccaaaggcttagtgcaacaccccccaggggccacagag
tccgagctggccttccccagcttcctcctgcagtgcttcctgggggccctgtggctgact
ctgagtggtgaaatcaaggacaaggagctcccgcagtatctagcattgaccccaaggaag
aagaggccctatgacaactggctggagggcgtgccacgctttctgactgggctgatcttc
cagcctcgcgcccgctgcctgggagccctagttgggccatcggtgactgccttggcggac
aggaagcagaaggtgctagcaaggtacttgaagcggctgcagccggggacactgcgggcg
cggcagctgctggagctgctgcactgcacccacgaggctgaggaggctggaatttggcag
cacgtggtgcaggagctccccgcccgcctctcttttctgggcacccgtctcacgcctccc
gatgctcatgtattgggcaaggccttggaggcggcaggccaagacttctccctggacctc
cgcagcactggcattgacccctctggattggggagcctcgtgggactcagctgtgtcacc
catttcagggctgccttgagtgatacagtggcgctgtgggagtccctgcggcagcatggg
gagactgagctacttcaggcagcagaggagaagttcaccattgaacctttcaaagccaag
tccctgaaggatgtggaagacctgggaaagcttgtgcagactcagaggacaagaagttcc
tcggaagacacagctggggaactccctgctgttcgggacctaaagaaactggagtttgcg
ctgggccccatctcaggccccnaggctttccccaaactggtgcagatcctcacggccttt
tcctccctgcagcatctggacctggatgcactgagtgagaacaagatcggggacgagggt
gtctcgcagctctcagccaccttccccnagctgaagtccctggaaaccctcaacctgtcc
caaaacagcatcactgacctgggtgcctacaaacttgctgagggcctgccttcactcgct
gcatccctactcaggctaagcttgtacaataattgcatctgcgacatgggagccgagagc
ctggctcgtgtgcttccggacatggtgtccctccgggtgatggacgttcagtacaacaag
ttcacggctgccggggcccagcagctcgctgccagccttcggaagtgtcctcacgtggag
acgctggcgatgtggacgcccaccatcccattcagtgtccaggaacacctgcaacaacag
gattcacggatcagcctgagatga
DBGET
integrated database retrieval system
