Rhinopithecus bieti (black snub-nosed monkey): 108541330
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Entry
108541330 CDS
T04641
Symbol
PATL1
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108541330 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbb03019
]
108541330 (PATL1)
Messenger RNA biogenesis [BR:
rbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108541330 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
108541330 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
108541330
NCBI-ProteinID:
XP_017746303
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFTQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPTVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPSATPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLYQRQQQNRNQHRNLNGAGDRGVTAAVIKIHLRKDPYANLCCKREKDWVSKIQMMQ
LQSTGSLPDDFYWYNYFEKLGETGSQAAEEIQGDGPKKDAPKLITPSGGQTRHGYKPVQF
EGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVED
YERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVA
RILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTITSLLQQ
LMNLPQSAATPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDPATESTQNNQWTEVM
FMATRELLRIPQAALAKPISIPTNLVSLFSRYVDQQKLNLLETKLQLVQGIR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggactgggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagaaaagcta
ccagtggcagttaatgaacaaacaggcaatggagagagagatgaaatggatttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctatcatgagggcagtgcagaccaggccagttttacaaccccaaccaggaagc
ctgaattccagtatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccccag
ggtccagaagatgatcgggacctttctgaacgtgcattaccaaggcggtcaacttcacct
atcattggcagtcctcctgttagagctgtccccataggcaccccacctaaacagatggct
gtacccagcttcacccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccacctcgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctcctgggtcacccttttcctcctactgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtgcctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccctctgctacaccacctccacagcagcaccctcctggcccaggaccccacctg
caaaacctaagatctcaggccccaatgtttagaccagacacaactcaccttcatccacag
caccgtcgactcttgtatcagagacagcaacagaatagaaatcagcatcggaatctcaat
ggtgcaggagatagaggagtcacggcagcagtcatcaagatccatctccgaaaggatcca
tatgccaatctatgttgcaagcgggaaaaggattgggtctccaaaatccagatgatgcaa
ctgcaaagcactggatccctaccggatgatttttattggtataattactttgaaaaactg
ggagaaactggttcgcaggctgctgaagaaatacaaggtgatggccctaagaaggacgca
ccaaagcttatcaccccctcaggtggccaaactaggcacggctataagccagtgcaattt
gagggctctttgggaaagcttaccgtttctagtgtgaataatccccgaaaaatgattgat
gctgttgtgacatctcggagtgaggatgatgagacaaaagaaaaacaagttcgagacaag
aggagaaaaacccttgtcataattgagaaaacctacagcttactccttgatgtggaggac
tatgaaagacgttatctcctaagtctagaagaagagcgacctgccctaatggatgagaga
aagcacaaaatttgtagcatgtatgacaacttgaggggcaaattgcccggacaagagagg
cctagtgatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcc
cgtattcttcctttcctctccacagagcaagcagctgacattctcatgacaacagccagg
aatctccctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagt
cccttctctctcctcctctatcatcttccatcagtgactatcaccagccttttgcaacag
ctaatgaacctacctcaaagtgcagctacaccagcaccctccaatcctcacctcactgct
gtgctccagaacaagtttggcctgtcactgctccttatcctcctgagccgtggtgaagac
ctacagagttcagaccctgctacagaatcaacgcaaaataatcagtggacggaggtgatg
ttcatggcaacacgagaacttctacgaattccccaagcagccctggccaagccaatctct
atacctacaaacctagtgtccctcttttctcgctatgttgaccagcagaaactgaacttg
ctggagacaaaactgcagctagttcaggggatacgataa
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