Rhinopithecus bieti (black snub-nosed monkey): 108541427
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Entry
108541427 CDS
T04641
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04622
RIG-I-like receptor signaling pathway
rbb05161
Hepatitis B
rbb05162
Measles
rbb05164
Influenza A
rbb05168
Herpes simplex virus 1 infection
rbb05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108541427 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
108541427 (IFIH1)
05171 Coronavirus disease - COVID-19
108541427 (IFIH1)
05164 Influenza A
108541427 (IFIH1)
05162 Measles
108541427 (IFIH1)
05168 Herpes simplex virus 1 infection
108541427 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rbb04054
]
108541427 (IFIH1)
Enzymes [BR:
rbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108541427 (IFIH1)
Pattern recognition receptors [BR:
rbb04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
108541427 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SNF2-rel_dom
SWI2_SNF2
DUF3638
Cas3-like_C_2
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
108541427
NCBI-ProteinID:
XP_017746458
UniProt:
A0A2K6KHF6
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MSNGYSTDENFRYLISCFRTRVKMYIQVEPVLDYLTFLPAEVKEQIQRTVATSGNMQAVE
LLLSTLEKGVWHLGWTREFVEALRRAGSPLAARYMNPELTDLPSPSFENTHDECLQLLNL
LQPTLVDKLLVRDVLDKCMEEELLTIEDRNRIAAAENNGNESGVRELLKRIVQKENWFSA
FLDVLRQTGNNELVQELTGTDCSESNAEIENLSQDDGPQVEEQLLSTTVQPNLEKEVWGM
ENNSSESSFADSSAVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENVAARA
SPEPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVI
VLVNKVLLVEQLFRKEFKPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENS
LLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVIP
LPQILGLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFA
IADDTREDPFKEKLLEIMTRIQTYCQMSPMSDFGTQPYEQWAIQMEKKAAKEGNRKDRVC
AEHLRKYNEALQINDTIRMIDAYNHLETFYNEEKDKKFAVIEDDSDEGGDDEYCDGDEDE
DDLRKPLKLDETDRFLMTLFFENNKMLKKLAENPEYENEKLTKLRNTIMEQYTRTEESAR
GIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRT
GEINLLIATTVAEEGLDIKECNIVIRYGLVTSEIAMVQARGRARADESTYVLVAHSGSGV
IERETVNDFREKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEKKMKTKRSIAKHYKNNP
SLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKELYIVRENKALQKKCADYQTNGEI
ICKCGQAWGTMMVHKGLDLPCLKIRNFVVVFKIIQQRNNTKVG
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgggtattccacagatgagaatttccgctatctcatctcgtgcttcaggacc
agggtgaaaatgtacatccaggtggagcctgtgctggactacctgacctttctgcctgca
gaggtgaaggagcagattcagaggacggtggccacctccgggaacatgcaggcagttgaa
ctgctcctgagcaccttggagaagggagtctggcaccttggttggactcgggaattcgtg
gaggccctccgaagagcgggcagccctctggccgcccgctacatgaaccctgagctcact
gacttgccctctccatcgtttgagaacactcatgatgaatgtctccaactgctgaacctc
cttcagcccactctggtggacaagcttctagttagagacgtcttggataagtgcatggag
gaggaactgttgacaattgaagacagaaaccggattgctgctgcagaaaacaacggaaat
gaatcaggtgtaagagaactactaaaaaggattgtgcagaaggaaaactggttctctgca
tttctggatgttcttcgtcaaacaggaaacaatgaacttgtccaagagttaacaggcact
gattgctcagaaagcaatgcagagattgagaatttatcacaagatgatggtcctcaagtg
gaagagcaacttctttcaaccacagttcagccaaatctggagaaggaggtctggggcatg
gagaataactcatcagaatcatcttttgcagattcttctgcagtttcagaatcagacaca
agtttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatg
ggcagtgattcaggcaccatgggaagtgattcagatgaagagaatgtggcagcaagagca
tccccggagccagaactccagctcaggccttaccaaatggaagttgcccaaccagccttg
gaagggaagaatatcatcatctgccttcctacagggagtggaaaaaccagagtggccgtt
tacattgccaaggatcacttagacaagaagaaaaaagcatctgagcctggaaaagttata
gttcttgtcaataaggtactgttagttgaacagctcttccgcaaggagttcaaaccattt
ttgaagaaatggtatcgtgttattggattaagtggtgatacccaactgaaaatatcattt
ccagaagttgtcaagtcgtgtgatattattatcagtacagctcaaatccttgaaaattcc
ctcttaaacttggaaaatggagaagatgctggtgttcaattgtcagacttttccctcatt
atcattgatgaatgtcatcacaccaacaaagaagcagtgtataataacatcatgaggcgt
tatttgatgcagaagttgaaaaacaatagactcaagaaagaaaacaaaccagtgattcct
cttcctcagatactgggactaacagcttcacctggtgttggaggggccacaaagcaagct
aaagccgaagaacacattttaaaactatgtgccaatcttgatgcatttactattaaaact
gttaaagaaaaccttgatcaactgaaaaaccaaatacaggagccatgcaagaagtttgca
attgcagatgacaccagagaagatccatttaaagagaaacttctagaaataatgacaagg
attcaaacttattgtcaaatgagtccaatgtcagattttggaactcaaccctatgaacaa
tgggccattcaaatggaaaaaaaagctgcaaaagaaggaaatcgcaaagaccgtgtttgt
gcagaacatttgaggaagtacaatgaggccctacaaattaatgacacaattcgaatgata
gatgcatataatcatcttgaaactttctataatgaagagaaagataagaagtttgcagtc
atagaagatgatagtgatgagggtggtgatgatgagtattgtgatggtgatgaagatgag
gatgatttaaggaaacctttgaaactggatgaaacagatagatttctcatgactttattt
tttgaaaacaataaaatgttgaaaaaactggctgaaaacccagaatatgaaaatgaaaag
ctgaccaaattaagaaataccataatggagcaatatactaggactgaggaatcagcacga
ggaataatctttacaaaaacacgacagagtgcatatgcactttcccaatggattaccgaa
aatgaaaaatttgctgaagtaggagtcaaagcccatcatctgataggagctggacacagc
agtgagttcaaacccatgacacagaatgaacaaaaagaagtcattagtaaatttcgcact
ggagaaataaatctgcttatcgctaccacagtggcagaagaaggtctggatattaaagaa
tgtaacattgttatccgttatggtcttgtcaccagtgaaatagccatggtccaggcccgt
ggtcgagccagagctgatgagagcacctacgtcctggttgctcacagcggttcaggagtt
atcgaacgtgagacagttaatgatttccgagagaagatgatgtataaagctatacactgt
gttcaaaatatgaaaccagaggaatatgctcataagattttggaattacagatgcaaagt
ataatggaaaagaaaatgaaaaccaagagaagtattgccaagcattacaagaataaccca
tcactaataactttcctttgcaaaaactgcagtgtgctagcctgttctggggaagatatc
catgtaattgagaaaatgcatcatgtcaatatgaccccagaattcaaggaactttacatt
gtaagagaaaacaaagccctgcaaaagaagtgtgcagactatcaaacaaatggtgaaatc
atctgcaaatgtggccaggcttggggaacaatgatggtgcacaaaggcttagatttgcct
tgtctcaaaataaggaattttgtagtagttttcaaaataattcaacaaagaaacaataca
aaagtgggttga
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