Rhinopithecus bieti (black snub-nosed monkey): 108542110
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Entry
108542110 CDS
T04641
Symbol
SCAF8
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbb03021
]
108542110 (SCAF8)
03041 Spliceosome [BR:
rbb03041
]
108542110 (SCAF8)
Transcription machinery [BR:
rbb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108542110 (SCAF8)
Spliceosome [BR:
rbb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108542110 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
DUF3525
Motif
Other DBs
NCBI-GeneID:
108542110
NCBI-ProteinID:
XP_017747474
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEP
KKEIPTSQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSAEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPAIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNA
PTKQAEPEDKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPN
VSSNSEILGVRPSNVSSSSGIIGAQPPNILNNSGILGIQPPSVSSGSGLLGVLPPNIPNN
SGLVGVQPPNVPNTSGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRF
PLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSIDNVANPEK
RIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDH
FGRPPVDIRESLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEE
RGRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLG
RDRIQNTWVPPPHARVFDYFEGATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEK
LTSSNEINKEKSDTVADIESEPVVESTETEGT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactataaacca
cccatttcgaaagcaaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaagtttattcagaaatgtaaaccagaatacaaa
gtacctggactttatgttattgactccattgtgcgacaatccagacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtactaaacttatggcagaag
aataatgtatttaagagtgagattattcagcctcttttggatatggcagccgggattccg
cctcctgttgtcacacctgttttggccagcactaccactgctatgagcaatactccagga
actcctgtgacacctgttactccagccaatgtggtccaaggcttacctgatccgtgggta
tctcagataacaaatacagatacactcgcagctgtggctcagatcttgcaaagtcctcaa
ggccagcagcttcaacagttaatacaaaccttacagatacaacaacagaagccccagcct
tccattctgcaggccctggatgctggtcttgttgttcagctgcaagctcttacggcacaa
cttacagctgcagctgcggctgccaacactcttactcccttagaacagggagtctccttt
aacaagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaaccc
aaaaaagaaattccaacttcacaactttctcacgtgtcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacaacagcaaaacctagaacatctcagacagcagctc
ttggagcagcaacagcctcaaaaggccactcctcaggatagtcaggaaggaacatttggg
tcagagcattcagcgtcgccatcacaagggagtagtcagcagcattttcttgaacctgaa
gtcaatttggatgattccatagatattcagcagcaggatatggatatagatgaagggcaa
gatggagtggaagaggaggtctttgaacaagaagctaagaaagtggcggttcgctcaaga
tcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacgg
tctggctctagaaagcgtaaacacagaaagcgatcacgctcccgctcaagagaaagaaag
aggaaatcatcacggtcgtattcaagtgaaaggagagccagagaaagggaaaaagaaaga
cagaagaagggattacctccaattagatctaaaacactgagtgtatgtagtactactctc
tgggttgggcaagtggacaagaaggcaacacaacaagacttaaccaacctgtttgaagag
tttggacaaattgaatccattaatatgattcctcccagaggctgtgcttatgtctgcatg
gttcatcgacaagatgcatttcgagctcttcagaaactcagttctggatcgtataaaatt
gggtccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatacaaa
cagttctgggatgtggatcttggagttacatatataccatgggaaaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgattgatcaggagactgtaaatactgagtgg
gaaactgtgaaaagcgcagaacctgttaaagagacggtgcagacaactcagagcccaact
ccagttgaaaaggagacagtggtcacaacccaggcagaggttttccctcctcctgttgct
atgttgcagattccagtggcgccagccgtgcctacagttagtttagtcccaccagcattt
cctgtgtcgatgccggttcctcctcctggatttagtccaattcctccacctcctttttta
cgagcaagttttaacccttcacaaccaccacctggtttcatgccgcctccagttccccca
cctgttgtgccaccccctgcaattccaccagtagtaccaacatctttagtgcagccgtca
ttatccatgaccccggaaactgtgaaagatgttggatttggtagccttgttataccgggt
ggctctgttgccagcaatcttgctacttccgctctgccagctggaaatgtttttaatgct
ccaactaaacaggcagagcctgaagataaagtacctcatctgatagaccaccagatttct
tctggtgaaaacaccagatcagtgattccaaatgatatttcaagtaatgctgcaatttta
ggaggacagccaccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaat
gtatcaagtaattctgaaattcttggggtccggccatctaatgtttccagtagttctggg
attattggagcccaaccaccaaatattctaaataactctggaatattgggaatacagcca
cccagtgtgtcaagtggttctggacttttgggagtgctacccccaaatatacctaacaat
tctggacttgtaggagtacagccaccaaatgttccaaatacttctggacttctgggaaca
cagccaccagctggacctcaaaacttaccccctttaagtatccctaatcaaaggatgccc
acaatgccaatgttagacattcgtccaggactaataccacaggcacctgggccaagattc
cctttaatacagcctggaattccaccccaacggggaatcccacccccatcggtacttgat
tcagctcttcatccaccaccccgtggaccttttcctccaggagatatttttagtcagcca
gaaagaccttttttagctcctggaagacaaagcatagacaatgttgctaacccagagaaa
aggataccgcttgggaatgataacattcaacaggaaggagacagagattaccggtttcct
cctatagaaaccagggaaagcattagtagacctccccctgtggatgttagagatgtggtt
gggcggcctatagatccaagagaaggtcctggacggccaccactagatggtagggatcat
tttggaagacctcctgtagatataagagagagtcttgtgaggccaggtatagatcatctt
ggtcgaagagaccactttggctttaatccagagaagccctgggggcatagaggagatttt
gatgagagagagcatcgggttctaccagtctatggtggtccaaaaggcttacatgaagaa
agaggtagatttcggtctggaaactatcgatttgatcctagaagtggtccttggaaccga
ggatttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaa
agggatagggatgacagagattttgatttctgcagagaaatgaacggaaatcgtcttgga
cgagacagaattcaaaacacttgggttccccctcctcatgctcgggtttttgattatttt
gaaggggccacttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaataca
gagagacatgctcagccaccacctataccagtacagaatgatcctgaactttatgaaaaa
ctgacatcttcaaatgaaataaacaaggagaagagtgacacagttgctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
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