Rhinopithecus bieti (black snub-nosed monkey): 108542625
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Entry
108542625 CDS
T04641
Symbol
VPS13A
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rbb04131
]
108542625 (VPS13A)
Membrane trafficking [BR:
rbb04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108542625 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
108542625
NCBI-ProteinID:
XP_017748184
LinkDB
All DBs
Position
Unknown
AA seq
3143 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQLDVPFKVKVG
HIGIKYDPLKEEKQLMEAKQQELKRIEEAKQKVVDQEQHLPENRTXFCRKLVTQIIKNLQ
VKISSIHIRYEDDITNRIKPLSFGISLQNLSMQTTDQYWVPCLHDETEKLVRKLIRLDNL
FAYWNVKSQMFYLNDYDDSLDDLRNGIVNENIVPEGYDFVFRPISANAKLVMNRRSDFDF
SAPKINLDVELHNIAIEFNKPQYFSIMELLESVDMMTQNMPYRKFRPDVPLHHHAREWWA
YAIHGVLEVNVCPRLRMWSWKHIRKHRGKMKQYKELYKKKLTSKKPPGELLVSLEELEKT
LDVLNITIARQQAEVEVKKAGYKIYKEGVKDPEDNKGWFSWLWSWSEQNTNEQQPDVKPG
ILEEMLTPEEKALLYEAIGYSETAVDPTLPKTFEALKFFVHLKSMSVVLRENHQKPELID
IVIEEFSTLIVQRPGAQAVKFETKIDSFHITGLPDNSEKPRLLSSLDDAMSLFQITFEIN
PLDETVAQRCIIEAEPLEIIYDARTVNSIVEFFRPPKEVHLAQLTSATLTKLEEFRNKTA
TGLLYIIETQKVLDLRINLKASYIIVPQDGIFSPTSNLLLLDLGHLKVTSKSRSELPDVK
QGEANLKEIMDIAYDSFDIQLTSIQLLYSRVGDNWREARKLNVSTQHILVPMHFNLELSK
AMVFMDVRMPKYIQDFGKLPLISLRISDKKLQGIMELVESIPKPEPVTEVSAPVKSFQIQ
TSTSLGTSQISQKIIPLLELPSVSEDDSEEEFFDAPCSPLEEPLQFPTGVKSIRTRKLQK
QDCSVNMTTFKIRFEVPKVLIEFYHLVGDCELSVVEIHVLGLGTEIDIRTYDLKANAFLK
EFCLKCPEYLDENRKPVYLVTTLDNTMEDLLTLEYVKAEKNVPNLKSTYNNVLQLIKVNF
SSLDIHLHTEALLNTINYLHNILPQSEEKSAPVSSTETEDKGDVIKKLALKLSTNEDIIT
LQILAELSCLQIFIQDQKRNISEIKIEGLDSEMIMRPSETEINAKLRNIIVLDSDITAVY
KKAVYITGKEVFSFKMVSYMDATAGSAYTDMNVVDIQVNLVVGCIEVVFVTKFLYSILAF
IDNFQAAKQALAEATVQAAGMAATGVKELARRSSRMALDINIKAPVVVIPQSPVSENVFV
ADFGLITMTNTFHMITESQSSPPPVIDLITIKLSEMRLYRSQFINDAYQEVLDLLLPLNL
EVVVERNLCWEWYQEVPCFNVNAQLKPMEFILSQEDITTIFKTLHGNIWYEKDGSASPAV
TKDQYIATSGVTTTASHHSGGATVVTAAVVEVHSRASLVKTTLNMSFKTDYLTMVLYSPG
PKQASFTDVRDPSLKLAEFKLENIISTLKMYTDDSTFSSFSLKNCILDDKRPHVKKATPR
MIGLTVGFDKKDMMDIKYRKVRDGCVTDAVFQEMYICASVEFLQTVANVFLEAYTTGTAV
ETSVQTWTAKEEVPTQESEKWEFNVIIKNPEIVFVADMTKNDAPALVITTQCEICYKGNL
ENSTMTAAIKDLQVRACPFLPVKRKGKVTTVLQPCDLFYQTTQTGTDPQVIDMSVKSLTL
KVSPVIINTMITITSALYTTKETIPEETASSTAHLWEKKDTKTLKMWFLEESNETEKIAP
TTELVPKGEMIKXTLXFYFIVLEAGIGHRTVPMLLAKSRFQGKXQNWSSLINLHCQLELE
VHYFNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKVYIYVQKAIVESDPEEENYKVPEYKT
VISFHSKDQLNITLSKCGLVMLNNLVKAFTEAATGSSADFVKDLAPFIILNSLGLTISVS
PSDSFSVLNIPMAKSYVLKNEESLSMDYVRTKDNDHFNAMTSLSSKLFFILLTPVNHSTA
DKIPLTKVGRRLYTVRHRESGVERSIVCQIDTVEGSKKVTIRSPVQIRNHFSVPLSVYEG
DTLLGTASPENEFNIPLGSYRSFLFLKPEDEDYQMCEGIDFEEIVKNDGALLKKKCRSKN
PSKQSFVVNIVPEKDNLTSLSVYSEDGWDLPYIIHLWPPILLRNLLPYKIAYYIEGIENS
VFTLSEGHSAQICTVQLDKARLHLKLLDYLNHNWTSEYHIKPNQQDISFVSFTCVTEMEK
TDLDIAVHMTYNTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPN
HFFNNNKVQLMVTDSELSDQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTF
TPFIXLXNKSKYRISVAEEGTDKWLSLDLEQCIPFWPEDASSKLLIQVEGSEDPPKRIYF
NKQENCILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAATFLLINHTKNELVQYNQSS
LSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDMMMPIDLGKKTIYLVSF
FEGLQRIILFTEDPKVFKVTYESEKAELAEQEIAVALQDVGISLVNNYTKQEVAYIGITS
SDVVWETKPKKKARWKPMSVKHTEKLEREFKEYTESSPSEDKVIELDTNIPVRLTPTGHN
MKILQPRVIALRRNYLPALKVEYNTSAHQSSFRIQIYRIQIQNQIHGAVFPFVFYPVKPP
KSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFIYALTDLMTEAE
VTENTEVELFHKDIEAFKEEYKTASLVDQSQVSLYEYFHISPLKLHLSVSLSSGGEEAKD
SKQNGGLIPVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSDLQSEVLRHYSKQ
AIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVG
GAVGGLAGAASKITGAMAKGVAAMTMDEDYQQKRREAMNKQPAGFREGITRGGKGLVSGF
VSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETS
EVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITR
CGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIVHGRRLRIEAKERVKSVFHAREFGKIINF
KTPEDARWILTKLEEAREPSPSL
NT seq
9432 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgagtcggtggtcgtggacgtgttaaaccggttcttgggggactatgtggtg
gacctggacacgtcccagctctctctgggcatctggaaaggagctgtggccctcaagaat
cttcaaattaaagaaaatgccctgagtcaactggatgtaccatttaaagttaaagttggt
cacataggaataaaatatgatcctttaaaagaagagaaacaactcatggaagcaaagcaa
caggaactgaaaagaatagaagaagcaaaacaaaaagtagttgatcaagaacaacatctg
ccggaaaacaggacanncttttgcagaaaattagttacacagatcataaaaaatcttcaa
gtgaaaatttccagtatccatattcgttatgaagatgatatcacaaatcggatcaaaccg
ctgtcatttggtatttcccttcagaatctcagcatgcagacaactgatcaatactgggtt
ccatgtttacatgatgaaactgagaaactagttcgtaagttaatccgattggataacctt
tttgcctattggaatgtgaagtctcagatgttttatcttaatgattatgatgactccttg
gatgacttgaggaatggcattgtcaatgaaaatattgttccagaaggttatgattttgta
tttcgtcccatatctgctaatgccaaacttgtgatgaatcgccgatctgattttgacttt
tctgcccccaaaataaacttggatgttgagttacataacatagcaattgaatttaataaa
ccacagtatttcagtattatggagcttcttgaatcagttgatatgatgacacaaaatatg
ccatataggaagttcagacctgacgtgcctcttcaccaccatgccagagaatggtgggct
tatgctatacatggtgttcttgaagtaaatgtttgccccaggttacggatgtggtcatgg
aagcatattagaaaacataggggaaaaatgaagcaatataaagaactgtataaaaaaaag
ttaacaagtaagaagccacctggtgaacttctcgtgtctttggaggagttggaaaaaacc
ttggatgtccttaatataactatagctagacaacaggcagaagttgaggtaaagaaagct
ggatacaaaatttacaaagaaggagtaaaagatccagaggataataaagggtggtttagc
tggctatggtcttggtcagaacaaaatactaatgaacagcaaccagatgttaaacctgga
attcttgaagaaatgttgacacctgaagaaaaagctttactctatgaagcaattggctat
agtgaaacagcagttgatccaactttgccaaaaacatttgaagccttgaagttttttgtc
cacttgaaaagtatgtctgttgttctaagagaaaatcatcaaaaacctgagctgatagat
attgtaatagaagaatttagcaccttaattgtgcaaagaccaggagcgcaagcagtaaaa
tttgaaactaaaatagattcatttcatattactggcttaccagataattcagaaaaaccc
cgcctcctgtcttcattggatgatgcaatgtcactcttccaaattacatttgagataaat
ccattagatgaaactgttgctcagaggtgtatcatagaagctgaacctttagaaatcata
tatgatgcaaggacagtgaatagtatagtggaattcttcagacctccaaaagaggtacat
ctagcacagctcacttcagcaactttgacaaaactggaagaatttcgcaataagacagca
acaggtctactgtatattattgaaacacagaaagttcttgatctcagaattaatttgaag
gcttcatatattattgtcccacaagatggaatttttagtcctacatcaaatctgcttctt
ttggaccttggtcatcttaaggtgacaagtaaaagtcgttctgaattaccagatgtgaaa
caaggtgaggccaatcttaaagagataatggatatagcttatgattcctttgatattcaa
cttacaagcatacagctgctttacagtagagttggtgataattggagagaagcacgaaaa
ctcaatgtatctacccagcatattttggtacccatgcacttcaatttggaactgtctaag
gccatggttttcatggatgtaaggatgcccaagtatattcaagattttggaaagttacct
cttatttctttacggatctcagataaaaaactacaagggattatggaattggttgaaagt
attccaaaacctgaaccagtaactgaagtatctgcccctgtcaaatcattccagattcaa
acatctacttctttgggaacatcacagatttcacagaaaataattcctctcttggaactt
ccatctgtttctgaagatgattcagaggaggaattttttgatgcaccatgtagtcccttg
gaagaacctcttcagttcccaactggagttaaaagtattcgaaccagaaagttacaaaag
caggattgttcagtaaatatgactacgtttaaaatacgatttgaagtaccaaaggttttg
atcgagttttatcaccttgttggagattgtgaactatctgtggtagaaattcatgtttta
ggattgggcacagaaattgacattagaacatacgatttgaaagcaaatgccttcttgaaa
gagttctgcttaaaatgcccagaatacttggatgaaaacaggaaaccagtttatttggtt
acaaccctggataacacaatggaagacctgttaacgctggaatatgtaaaggctgaaaag
aatgtacccaacttgaaaagtacctataacaatgttttacagttgattaaggtaaatttt
tcctctttggatattcatttacacactgaagcacttctgaatacaataaattatcttcat
aatatccttccgcaatcagaggaaaaatcagccccagtgtcctctacagagactgaagac
aaaggagatgtcattaaaaaattagctttaaaactatccacgaatgaagatatcattact
ttgcagattttagcagaattatcgtgtttacagatctttattcaagatcagaaacgtaac
atttctgaaattaagattgaagggcttgattctgagatgattatgaggccttcagaaact
gaaataaatgcaaagctaaggaatataattgttttagattctgatataacagctgtatac
aaaaaggctgtttatatcactggaaaagaagttttcagcttcaaaatggtttcttacatg
gatgcaactgctggttctgcatacacggatatgaatgtggttgacattcaggttaattta
gtagttggttgcattgaagtagtttttgtcacaaaatttctatattctatattggctttt
atagataattttcaggcagctaaacaagccttggctgaggcaactgttcaggcagctgga
atggctgctactggtgtaaaagaactggcacgaaggagttccagaatggcactggatatt
aacatcaaagccccagttgtggtcatcccgcagtctccagtttctgaaaatgtttttgtt
gctgattttgggctaattacaatgacaaatacctttcatatgataacagagagccagagc
tctcccccacctgttattgatttgataacaataaagctgagtgaaatgcgactatacaga
tctcagtttattaatgatgcataccaggaagtactggatctactactgccattaaatctg
gaggtggtggttgaacgaaatttatgctgggagtggtaccaggaagttccttgttttaac
gtaaatgctcagctgaaaccaatggagttcattcttagtcaagaagatataacaactatt
tttaaaacattgcatggcaatatatggtatgaaaaagatggtagtgcctcacctgctgta
acaaaagaccaatacattgccactagtggagttactactactgcctcacaccattcagga
ggagcaactgtggtgacagctgccgtggtagaagtacattcacgtgcctccctagttaag
acaacactgaacatgagcttcaaaactgattatctcaccatggtgctgtatagtccaggt
cctaaacaagcttcctttacagatgttcgggatccttctctgaaacttgctgaatttaaa
ttggagaatattataagtactttaaaaatgtatacagatgactcaacattttcttccttc
tcattaaaaaactgtattttagatgataaaaggccccatgtcaagaaagcaactcctcga
atgataggactgactgttggttttgacaaaaaagacatgatggatataaagtacaggaaa
gtcagagatggctgtgtgactgatgcagtctttcaagaaatgtatatttgtgcaagtgta
gaatttctgcagactgttgcaaatgtctttcttgaggcctacaccacaggcactgctgta
gaaaccagtgtgcaaacatggactgctaaggaagaagtacctacgcaggaatcagagaag
tgggaatttaatgttattattaaaaatcctgaaattgtgtttgtggctgacatgacaaaa
aatgatgctcctgccttagtcattacaacacaatgtgaaatttgctataaaggtaacctt
gaaaatagcacaatgactgctgctattaaagatctccaagtgagagcctgcccgtttctt
ccagtcaagagaaaaggcaaagtcactacggttttgcagccctgtgacttgttttatcaa
actactcagacaggtacagatccacaagtgatcgatatgtcagtaaaatccctgacacta
aaggtttcaccagttattataaatactatgattaccataacttcagcactgtatacaact
aaggaaaccatcccagaagaaacagcttcttctactgcacatttatgggaaaagaaggat
acaaagactttaaaaatgtggtttcttgaagaatcaaatgaaactgaaaaaatagctccc
acaactgaattggtacccaaaggcgagatgataaaatgaacattgnnattctattttata
gttcttgaggctggaattggtcatagaacagtgcctatgcttctggcaaagtcacgtttt
caggggaagnngcaaaactggagttccctaataaatctgcactgtcagcttgagctagaa
gtgcattattttaatgaaatgtttggtgtatgggagcctttgcttgaacccttagaaatt
gatcagactgaggattttagaccatggaatcttggtatcaaggtatatatatatgtccaa
aaggccattgttgagtcagatcctgaagaagaaaactacaaagtgccagaatataaaact
gtcattagtttccattcaaaagaccaattaaacattacattatccaaatgtggtcttgtg
atgttaaataatttagtcaaggcatttacagaagctgccactggatcttcagctgacttc
gtaaaggatctagcaccatttataattttaaattcccttggacttactatctctgtttcg
ccaagtgattctttcagtgtactcaacattcctatggcaaaatcatatgtattgaaaaat
gaagaaagtttaagtatggattatgtccgaaccaaggacaatgatcatttcaatgcaatg
actagcctaagcagcaaactcttcttcattcttcttacacctgttaaccattctactgct
gataagattcctttaacaaaagtgggacgacgtctgtacactgtaagacacagagagtct
ggagttgaaagatctattgtttgtcaaattgatacagtggaaggaagtaagaaggtcaca
attcgctccccagtgcagataagaaatcatttttcagtcccactgtctgtttacgaaggg
gataccttattgggaactgcctcacctgaaaatgaattcaacataccattaggatcttac
cgatcattcctttttctgaagccagaagatgaggactatcaaatgtgtgaaggaattgac
tttgaagagattgtgaaaaatgatggtgctcttctaaagaagaaatgtagatctaaaaac
ccttctaagcagtcatttgtcgttaatattgttccagaaaaagataatttaacatctcta
tcagtgtattcagaagatggttgggatttaccatacataatacatttgtggccacctatc
ctgctccgaaatcttcttccttacaaaattgcttattatatagagggaattgaaaattcg
gtttttactctaagtgaaggacattcagcccagatttgtactgtacagttggataaagcc
aggctacatttaaaattacttgactatctcaatcacaattggacaagtgaatatcacata
aagcctaatcagcaagacattagttttgtcagttttacctgtgttacagaaatggaaaag
actgatttagatattgctgtccatatgacttataatactggtcagacagttgtggcattt
catagtccttattggatggtcaacaaaactggtcgcatgttacagtacaaagcagatgga
attcatcgaaagcatccacctaattataaaaagccagttctcttttcttttcagccaaat
cacttttttaataacaataaggttcaacttatggtaactgatagtgaattgtccgatcag
ttttcaattgatactgttggtagtcatggagctgttaaatgtaaaggtctgaaaatggac
tatcaagttggtgtcactatagacctgagcagttttaacattactagaattgtgacattt
accccttttatatgattannaaacaaaagcaaataccgtatatcagtggctgaagaagga
actgataaatggctctctcttgatttggagcagtgtatccccttttggcctgaggatgct
tctagtaaacttcttattcaagttgaagggagtgaagatcctcccaaaaggatatatttt
aacaagcaagaaaattgtattctattgcgtctggataacgagcttggaggtattatagca
gaagtgaatttggccgagcattctacagttattacatttttagattatcatgatggagca
gctacattcctcttaataaatcacacaaagaatgaacttgttcaatacaatcaaagttct
ctcagtgagatagaagattccctccctcctggaaaagcagtgttttatacatgggctgat
ccggtgggctctagaaggctgaagtggagatgtagaaaaagccatggtgaagtaacacaa
aaggatgatatgatgatgcctatagatttggggaaaaagacaatttatttagtttcattc
tttgaaggtttacaacgcattattttattcactgaagatccaaaggtatttaaagtaaca
tatgaaagtgagaaagcagagttagcagagcaagaaattgcagtggcattacaagatgtt
ggaatttctcttgtcaacaattacacgaagcaagaagtagcctatataggcatcacaagt
tctgatgtggtttgggagacaaagcccaagaagaaggcaagatggaagccaatgagtgta
aagcacactgagaagttagagagagaatttaaggaatatactgaatcttcaccttcagaa
gataaggttattgagttggacactaacattccggttcgcttaacacctactggtcataac
atgaaaattctgcagccacgtgtaatagctctacgaagaaattatcttccagcattaaaa
gtggaatataacacatctgcacatcaatcatcatttagaattcaaatctacagaatacag
atccaaaatcagatacatggtgctgtgtttccctttgtgttttaccctgttaaacctcca
aagtcggtcaccatggattcagcaccaaagccctttacagatgtcagtattgtcatgaga
tctgcaggacattcccagatatcacgtattaagtatttcaaagtattgattcaagaaatg
gatctcaggttagatcttgggtttatctatgctttaacagaccttatgacagaagctgag
gtaactgaaaatacagaggttgagctttttcataaagatatagaagctttcaaagaagaa
tataaaacagcctcattagtagatcaatcacaagtcagcctctatgaatattttcatata
tctcctctcaagttacatttaagtgtttcactgagttcgggcggagaagaagctaaagat
tcaaaacaaaatggaggactgattccagttcattctttaaatcttttgctgaagagtatt
ggtgccacactgacagatgtacaagatgtagtttttaagcttgcattttttgaactcaac
tatcagttccatacaacatccgacctacagtctgaagtcctaagacactattcaaaacag
gccattaagcagatgtatgtactcattcttggacttgatgttttgggaaatccatttggc
ttaattagagaattttctgaaggtgtagaagcattcttttatgaaccttaccagggagcc
atccagggtcctgaagagtttgtggagggaatggcactaggacttaaggcactagttggt
ggagctgttggtggattagcgggtgctgcctccaaaatcaccggtgctatggctaaaggg
gtagcagctatgactatggatgaagactaccaacagaagagaagagaagccatgaataag
caaccagctggttttagagaaggcatcactcgtggaggaaaaggcttagtttctggattt
gttagtggcataacaggaattgttacaaaaccaatcaaaggcgctcaaaaagaaggagca
gctggtttctttaaaggtgttgggaaaggtttagtgggagcagtagcaaggccaactgga
ggcatcatagacatggctagcagtacatttcagggaataaaaagagctacagagacttct
gaagtggagagtctgcgacctcctcggttcttcaatgaagatggagttatcagaccgtac
aggttgagggatggtactggaaatcaaatgttacaggtcatggaaaatggaagatttgca
aaatacaaatattttacccacgtcatgatcaataagacagatatgctaatgataaccaga
tgtggtgtattgtttgtaacaaagggaacatttggacagctcacgtgtgagtggcagtat
agctttgatgagtttaccaaagagccattcattgttcatgggagaagattgcgcattgaa
gcaaaggaacgagtgaagtctgtatttcatgccagagagtttggaaaaataattaacttc
aagaccccggaggatgccaggtggatccttacaaaactagaagaagcaagagaaccttct
ccaagcctctga
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integrated database retrieval system
