Rhinopithecus bieti (black snub-nosed monkey): 108543930
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Entry
108543930 CDS
T04641
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108543930 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rbb03041
]
108543930 (PRPF40B)
Spliceosome [BR:
rbb03041
]
Complex A
U1 snRNP components
U1 related factors
108543930 (PRPF40B)
Complex B
108543930 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
WW_2
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
108543930
NCBI-ProteinID:
XP_017750248
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MSVPDSGPRPPAAPAPFPPGPPMMPPPFDTLGLEMPPPGIPPPFPPMGLPPMSQRPPAIP
PMPLASCPNASTNGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGP
PRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYN
NQSKESRWTRPKDLDDLEVLVKQEAAGKQQQQLPQTLQPQPPQPQPDPPPAPPGPTPVPT
GLLEPEPGGSEDCDVSEATQPLEQGFLQQLEEGPSSSAGQHQPQQEEEESKPEPERSGLS
WSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQRE
KEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYD
DVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQL
QNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHS
MSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFC
VEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAA
FRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLEQTECQHLH
TKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSV
ESGGAALGGRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDE
KEQEQDKDRELRQAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcgacacactggggctggagatgccccctccagggatc
cccccaccctttcctccgatggggctaccccccatgagtcagagaccaccagctatcccc
cccatgcccctggcatcctgccccaatgcttccaccaatggggcgccaccaccactcaca
cagataccaggaatggtacctccgatgatgccaggaatgctgatgccagcggtgcctgtc
accgcagcgacggctccgggtgcggacaccgccagctctgctgtggctgggacaggacct
ccgagggccctatggagtgagcatgtggccccagatgggcgcatctactactacaatgct
gacgacaagcagtccgtgtgggagaagcccagcgtgctcaagtccaaggcagagctgctc
ctgtcgcaatgtccctggaaagagtacaagtcagacacaggcaaaccttactactataac
aaccagagtaaagagtctcgctggacccggcccaaggatctggatgacctagaggttcta
gtcaaacaagaggctgcagggaaacagcagcagcagctgccacagacacttcagccacag
ccgcctcagccacagcctgaccccccacctgcacctcctggccccaccccagtgcccaca
ggcctcctggaacctgagccaggtgggagtgaagattgtgatgtgtcggaggccacccag
cccctggaacaggggttcctgcagcagctggaggagggccccagcagttctgctggacag
catcagccacagcaggaggaggaggaatcaaagccagaaccagagaggtctggcctcagt
tggagcaaccgggagaaggcaaagcaggcattcaaggaactgctgagggacaaggctgtc
ccctccaacgcctcatgggaacaggccatgaagatggtggtcaccgacccccgttacagt
gccttgcccaaactgagtgagaaaaagcaggcattcaatgcctacaaggcgcagcgggag
aaggaggagaaggaggaggcccggctaagggccaaggaggccaagcagaccctgcagcat
ttcctggagcagcatgaacgcatgacctccaccacccgctaccggcgggcagaacagacc
tttggagagctggaggtctgggctgtggtccctgagagggatcgaaaagaggtttatgat
gatgtcctcttcttcctggccaagaaggagaaggaacaggccaagcagctccggcgccgc
aatatccaggccctaaagagcatcctggatgggatgagtagtgtcaacttccaaaccacc
tggtcccaggcccagcagtacctcatggataaccccagctttgctcaggaccatcagcta
cagaacatggacaaggaagatgcactgatctgttttgaggagcacatccgagctttggag
agggaagaggaggaggaacgggagcgggcccggcttcgggagcgacgccaacaacgcaag
aatcgggaggccttccagaccttcctggatgagctgcatgagacagggcagctgcactct
atgtccacctggatggagctatatccagcagtcagcactgatgtccgttttgccaacatg
ctgggccagccgggctccacgcctctggacttgttcaagttctatgtggaggagttgaag
gcacgattccatgatgaaaagaagatcattaaggacatccttaaggaccggggcttctgc
gtggaggtgaacacggcctttgaggacttcgcccacgtcataagctttgacaagagggct
gccgcactggatgcaggcaacatcaagctgaccttcaatagtctgctggagaaagcagag
gcacgggagagggagcgggagaaggaggaggcacgcaggatgcggcgcagggaagctgcc
tttcgaagcatgctgaggcaggctgtgcctgctctggagctaggcactgcctgggaagag
gtccgtgagcgttttgtgtgtgactcagcctttgagcagatcaccctggagtcggagcgg
atccggctcttccgggagttcctacaggtgctggagcagactgaatgccagcacctccac
accaaaggccgaaagcatggcaggaaaggcaagaagcaccatcgcaagcgttcccactca
ccctcaggctctgagtcagaagaagaggagctgcccccaccatctctccggccccccaag
cggaggaggcggaacccctcagagtcaggctctgagccctcttcctcacttgattcagtt
gaaagtgggggtgctgcccttggaggacggggctccccttcctcccatcttcttggagca
gatcatggccttcggaaagccaagaaaccaaaaaagaaaactaagaagagaagacacaag
tcgaacagtcctgagagtgagacagaccctgaggagaaagctggcaaggagagcgatgag
aaagaacaagaacaggacaaggacagggagctccggcaggcagagctccctaaccgttcc
ccaggctttggaatcaagaaggagaagacaggctgggacacgtcagaaagtgagctgagt
gagggtgagctggagaggcggcggcggacactcctacagcagctggacgatcaccagtga
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