Rhinopithecus bieti (black snub-nosed monkey): 108544169
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Entry
108544169 CDS
T04641
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04014
Ras signaling pathway
rbb04015
Rap1 signaling pathway
rbb04024
cAMP signaling pathway
rbb04520
Adherens junction
rbb04530
Tight junction
rbb04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
108544169 (AFDN)
04015 Rap1 signaling pathway
108544169 (AFDN)
04024 cAMP signaling pathway
108544169 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108544169 (AFDN)
04530 Tight junction
108544169 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
108544169 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
ASPP1-2_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
108544169
NCBI-ProteinID:
XP_017750646
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDIDEKPLVVQLNWNKDDREGRFVLKNENDAIPPKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKKREKEALRQASDKDDRPFQGEDVENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEA
LEKYGLEKENPKDYCIARVMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGILVF
QLKRRPPDHIPKKTKKHLEGKTPKGKERADGSGYGSALPPEKLPYLVELSPGRRNHFAYY
NYHTYEDGSDSRDKPKLYRLQLSVTEVGTEKLDDSSIQLFGPGIQPHHCDLTNMDGVVTV
TPRSMDAETYVEGQRISETTMLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLMVKG
PRHKPGIVQETTFDLGGDIHSGTALPTSKSTTRLDSDRVSSASSTAERGMVKPMIRVEQQ
PDYRRQESRTQDASGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMA
CRYVLSNQYRPDISPPERTHKVIAVVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMAN
ASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSL
QRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHY
WGAIIRQQLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLN
SLQLQALLQNYHCAPDEPFIPTDLIENVVAVAENTADELARSDGREVQLEEDPDLQLPFL
LPEDGYSCDVVRNIPNGLQEFLDPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHFLREN
TELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAA
GDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRIS
DRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSP
NVANQPPSPGGKSAYASGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFP
ASKSQDRMAPPQNQWPNYEEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEA
AMDRKSDSDMWINQSSSLDSSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAIPATPV
AVSQPIRTDLPPPPPPPPIHYAGDFDGISMDLPLPPPPSTNQIGLPSAQVAAAERKKREE
HQRWYEKEKARLEEERERKRREQERKLGQMRTQSLNPAPFSPLTTQQMKPEKPSTLQRPQ
ETVIRELQPQQQPRTIERRDLQYITVSKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVD
MLSKEIQELQSKPDRSAEESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIM
QRLEAERRARQTAMPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERT
KRDAEEKRRQEEGYYSRLEAERRRQHDEAARRLLEPEAPGLCRPPLPRDYEPPSPSPAPG
APPPPPQRNASYLKTQALSPDSLFTAKFVAYNEEEEEEDCSLAGQDKYSSTRVSHGDLLP
APLKPRPPPCQPRPVSDGIFLSNSFQPPPAKANSTAHKKVQPPPPPKKSSSYHPSHCKGP
NSYPGSAGAAVGAHDAYRDAKEKRSKSQDADLPGSSGAPENLTFKERQRLFSQGQDVSNK
VKASRKLTELENELNTK
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgagattttattttcaagataaagctgctggaaactttgcaacaaaatgtattcgggtc
tctagtactgccaccactcaagatgtaattgaaacgctcgcagagaaatttcgacctgat
atgcggatgctgtcctctcccaagtattcactctatgaagtgcatgtcagcggagaagaa
agaagattggacatagatgagaaacctctagttgtacaattgaattggaacaaagatgac
cgggaaggcagatttgttcttaagaatgagaatgacgccattcctcctaagaaggctcaa
agtaatggacctgaaaagcaggaaaaagaaggagttatccagaacttcaagagaactctg
tcaaagaaagaaaagaaggaaaaaaagaagagagaaaaagaggcattgcgacaggcgtct
gataaagatgatagacctttccaaggggaggacgttgaaaattctcgactggctgctgag
gtttacaaagacatgcctgaaaccagctttactcgaaccatttctaatcctgaggtggtt
atgaaacgacggaggcaacaaaaattggaaaagagaatgcaggaatttcggagctcagat
gggcggcctgattcaggtggaacattgagaatttatgcagatagtttaaaaccaaatatt
ccctacaagacaatcctgctgtctactacagatcctgcagactttgctgtggctgaagct
ttagagaagtatggtctggaaaaagaaaaccctaaggattactgcatcgcccgggttatg
cttcctcctggagcccagcattctgatgaaaagggtgctaaagaaattattcttgatgat
gatgagtgtcctttacaaatcttcagggaatggccaagtgacaaagggattttagtcttt
cagttgaagaggaggccaccagaccacatcccaaagaaaaccaagaaacatttggaaggc
aagacacccaagggaaaggagagagctgacgggtctggctatggctccgcccttcctccg
gagaagctgccctatttagtagagttaagcccagggagaaggaatcactttgcctactac
aactatcacacttatgaagatggttctgactctagagataagccaaagctttaccgcctt
cagttaagtgttactgaagttggtacagaaaaattggatgacagctctatccagttgttt
ggcccaggaattcagccccatcactgtgacctcaccaacatggatggagtggtcactgtg
acgcccagaagtatggacgcagaaacctatgtggaaggccagcgcatctcggaaaccacc
atgctgcagagtggcatgaaagtgcagtttggggcatcccatgtatttaagtttgtggac
cccagtcaggatcatgctcttgcaaaaagatctgtggatggaggcctgatggttaagggc
ccgagacataaacctggaattgttcaggagacaacttttgatttgggaggagatattcat
agtgggacagcattaccgacaagcaagagcaccactaggctggacagcgacagagtgtca
tctgcctctagcacagccgagcggggaatggtgaagccgatgatcagagtagagcagcag
ccagattatcgcaggcaagaaagcagaacacaggatgcttctgggcctgaactgatactg
cctgcaagcattgaattcagggaaagttctgaagattcatttttatctgccattataaat
tatactaatagctctacagtccactttaagttgtcccctacatatgtattatatatggca
tgccggtatgtattgtccaaccagtacagacctgacatcagccctccagagcgcacacat
aaagtcattgcagtcgtcaacaagatggtgagcatgatggagggcgtcatccaggaagta
gaccaggttgaccagaaacagaagaatattgcaggggcacttgccttctggatggcaaat
gcatctgaacttctcaacttcattaagcaagaccgagaccttagtcggatcacattggat
gctcaagatgttttagcacatttggttcaaatggcatttaaatacttggttcactgtctt
cagtcagaacttaataattacatgccagcctttctagatgaccctgaggagaacagtctg
caaagaccaaaaatagatgatgtgctgcacacgctcacaggagccatgtccttgctacga
cgctgcagagtcaatgccgccctgaccatccagctcttctctcagcttttccactttatc
aatatgtggctgttcaatagattagtgactgacccagattcagggctgtgctcccattac
tggggcgcaattatccgtcagcagctgggccacattgaagcctgggctgagaagcagggc
ctggagctggctgcagactgtcatctgagcaggatcgtgcaggcaacaactttgcttacc
atggataagtatgcacctgatgacattccaaatataaacagcacctgctttaagttaaat
tcactacaacttcaagccttattacagaactatcactgtgcacctgatgagccttttatc
ccaacggatcttatagaaaatgtagtggctgtggctgaaaacactgctgatgagctggcc
cgcagcgatggaagggaagtgcagttggaggaggatcctgacctacagctgccgtttctt
ttgccagaagatggttattcttgtgatgttgtcagaaacattccaaatggtttacaagaa
tttttagatcctctgtgccagagaggattttgcaggttaattcctcacacacgttcacca
ggtacttggacaatatattttgaaggtgcagattatgaaagtcactttctgcgtgagaac
acagagctggctcagccgctgaggaaagaacctgaaataatcactgtgaccctaaaaaag
cagaatggaatgggccttagcattgttgcagcaaagggtgctggtcaagataaactagga
atctatgtgaagtcggttgtgaaaggaggtgctgcagatgtggatggacgtctagctgca
ggtgatcaactcctcagcgtggatggacgaagtctggttggactctctcaggaaagggca
gcagaactcatgacaagaacaagctctgtggtgacactggaagtagcaaagcagggtgcc
atctaccacggtctggccacccttctcaatcagccatcccccatgatgcagagaatttca
gatcgtcgtggctcaggtaaaccccgaccaaagagtgaaggctttgaactctataataat
tccgctcaaaatgggtctcctgagagtcctcagctgccttgggcagaatatagtgaacca
aagaaattgcccggtgatgacagactgatgaaaaatagagctgatcaccgttccagcccc
aacgtagcaaatcagcctcctagtcctggagggaaaagtgcatatgcctctggaacaaca
gcgaagataacatctgtctctactggaaacctctgcactgaggagcagacgcctccgcct
agacctgaagcctaccccatccccactcagacgtacaccagagagtattttaccttccca
gcttccaaatcccaagatcggatggctcctcctcagaaccagtggccaaattatgaggaa
aagccacatatgcacacagatagtaatcactccagtattgcaattcagcgtgttacacgt
tcccaagaagaacttcgagaagataaagcttaccaacttgagcggcatcgaatagaggca
gctatggacagaaagtctgatagtgatatgtggataaatcagagttcctcattggactcc
agtacgtctagccaagagcacctgaaccattcctctaagtcggtcacccctgcttccaca
ctgaccaaaagtggccctggccgttggaaaacaccagcagcaataccggccacccctgtg
gccgtctcccagccaatccgaacagacctgcctccgccacccccgccacctcccatccac
tatgccggtgatttcgatggaatatccatggatttgcctctcccaccacccccttccacc
aaccagataggactgccgtctgcgcaggtggctgctgccgaacggaaaaagagagaagaa
catcagcgttggtatgagaaggagaaggcccgcctggaggaggagcgggagaggaagcgg
agagagcaggagaggaagctgggccagatgcgcactcagtccctaaaccctgctccgttt
tctcccctgaccacacagcagatgaagcccgaaaagccttccacactccagcggccccag
gaaacagtcattcgggagctacagcctcagcagcagccccgcacgatcgagcgcagggac
ttgcagtacatcacagtcagcaaagaggagctttcctcgggggacagtctgtcccctgac
ccgtggaagcgggatgccaaggagaagctggagaagcagcagcagatgcacatcgtggac
atgctgagcaaggagatccaggagctccagagcaaaccagaccgcagcgccgaggagagt
gaccggctgcgcaagctcatgctggagtggcagttccagaagagactacaggagtcgaag
cagaaggacgaagatgacgaggaggaggaggacgacgatgtggataccatgctcatcatg
cagcgcctggaggctgaacgaagagcgaggcagactgctatgccagcaatctctgttcta
gatttgttgcaggacgaggagcggaggcggcagcagcagttagaagagatgcgcaagcgg
gaagcggaagaccgagcgaggcaagaggaagagcgccggcggcaggaggaggagcgaaca
aaacgagacgctgaagaaaagaggcgacaggaagaagggtattacagccgcctggaagct
gagaggcgcagacagcacgacgaggcggcgcgcaggttgctggagcccgaggcacctggt
ctgtgccgccctccgcttccccgggactacgagcccccgtccccgtcccccgcgcccggc
gcccctcctcccccgcctcagcgaaacgcctcctacctcaaaacccaggccctctccccc
gactcgctgttcactgccaagtttgttgcatacaatgaggaggaggaggaggaggactgc
agcctagcaggtcaggataagtactccagcacgagagtgtctcatggggaccttcttcct
gcccctcttaaaccacggccacccccctgccagccacgcccggtctccgatggcatcttt
ctctcgaactcattccagccacccccagccaaagccaacagtactgctcacaaaaaagtc
cagcccccgccccctccaaaaaaatccagctcctaccatcccagccactgcaaaggacca
aactcttacccgggatctgctggagcagctgttggagcccatgacgcttaccgggatgcg
aaagagaagcgttctaaaagccaagatgcagatttacctggaagttctggggcccctgaa
aacttgacattcaaggaacgccagcgtcttttttcacaaggtcaagatgtatccaataaa
gtgaaagcctctcgtaaattaacagaactggagaatgaactgaacacaaaatga
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integrated database retrieval system
