Rhinopithecus bieti (black snub-nosed monkey): 108544440
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Entry
108544440 CDS
T04641
Symbol
HIF1A
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04066
HIF-1 signaling pathway
rbb04137
Mitophagy - animal
rbb04140
Autophagy - animal
rbb04148
Efferocytosis
rbb04659
Th17 cell differentiation
rbb04919
Thyroid hormone signaling pathway
rbb05167
Kaposi sarcoma-associated herpesvirus infection
rbb05200
Pathways in cancer
rbb05205
Proteoglycans in cancer
rbb05208
Chemical carcinogenesis - reactive oxygen species
rbb05211
Renal cell carcinoma
rbb05230
Central carbon metabolism in cancer
rbb05231
Choline metabolism in cancer
rbb05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
108544440 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108544440 (HIF1A)
04137 Mitophagy - animal
108544440 (HIF1A)
04148 Efferocytosis
108544440 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
108544440 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
108544440 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108544440 (HIF1A)
05205 Proteoglycans in cancer
108544440 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
108544440 (HIF1A)
05230 Central carbon metabolism in cancer
108544440 (HIF1A)
05231 Choline metabolism in cancer
108544440 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
108544440 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
108544440 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
108544440 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbb03000
]
108544440 (HIF1A)
Transcription factors [BR:
rbb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108544440 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
108544440
NCBI-ProteinID:
XP_017751033
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTET
DDQQLEEVPLYNDVMLPSSNEKLQNMNLAMSPLPTSETPKPLRSSADPALNQEVALKLEP
NPESLELSFTMPQIQDQPPSPSDGSTRQSSPEPNSPSEYCFYVDSDMVNEFKLELVENXF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSASPESASPQSTVT
VFQQTQIQEPTANVTTTTATTDELKTVTKDRMEDIKILIASPSSTHIHKETTSATSSPYR
DTQSRTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRTTIPEEELNPKILALQNAQRKR
KMEHDGSLFQAVGIGTLLQQPDDHAATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLA
CRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgcgaacgacaagaaaaagataagttctgaacgtcgaaaagaa
aagtctcgagatgcagccagatctcggcgaagtaaagaatctgaagttttttatgagctt
gctcatcagttgccacttccacataatgtgagctcgcatcttgataaggcctctgttatg
aggcttaccatcagctatttgcgtgtgaggaaacttctggatgctggtgatttggatatt
gaagatgaaatgaaagcacaaatgaattgcttttatttgaaagccttggatggttttgtt
atggttctcacagatgatggtgacatgatttacatttctgataatgtgaacaaatacatg
ggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgtgac
catgaggaaatgagagaaatgcttacacacagaaatggccctgtgaaaaagggtaaagaa
caaaacacacagcgaagcttttttctcagaatgaagtgtaccctaactagccgaggaaga
actatgaacataaagtctgcaacatggaaggtattgcactgcacaggccatattcacgta
tatgataccaacagtaaccaacctcagtgtgggtataagaaaccacctatgacctgcttg
gtgctgatttgtgaacccattcctcacccatcaaatattgaaattcctttagatagcaag
acttttctcagtcgacacagcctggatatgaaattttcttattgtgacgaaagaattacc
gaattgatgggatatgagccagaagaacttttaggccgctcaatttatgaatattatcat
gctctggactctgatcatctgaccaaaactcatcatgatatgtttactaaaggacaagtc
accacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaaactcaa
gcaactgttatatataacaccaagaactctcaaccacagtgcattgtatgtgtgaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgtgtc
cttaaaccggttgaatcttcagatatgaaaatgactcagctattcaccaaagttgaatca
gaagatacaagtagcctctttgacaaacttaagaaggaacctgatgctttaactttgctg
gccccagccgctggagacacaatcatatctttagattttggcagcaatgacacagaaact
gatgaccagcaacttgaggaagtaccattgtataatgatgtaatgctcccctcatccaac
gaaaaattacagaatatgaatttggcaatgtctccattacccacctctgaaacgccaaag
ccacttcgaagtagtgctgaccctgcactcaatcaagaagttgcattaaaattagaacca
aatccagagtcactggaactttcttttaccatgccccaaattcaggatcagccacctagt
ccttctgatggaagcactagacaaagttcacctgagcctaatagtcccagtgaatattgt
ttttatgtggatagtgatatggtcaatgaattcaagttggaattggtagaaaacnntttt
gctgaagacacagaagcaaagaacccattttccactcaggacacagatttagacttggag
atgttagctccctatatcccaatggatgatgacttccagttacgttccttcgatcagttg
tcaccattagaaagcagttccgcaagccctgaaagcgcaagtcctcaaagcacagttaca
gtattccagcagactcaaatacaagaacctactgctaatgtcaccactaccactgccacc
actgatgaattaaaaacagtgacaaaagaccgtatggaagacattaaaatactgattgca
tctccatcttctacccacatacataaagaaactactagtgccacatcatcaccttataga
gatactcaaagtcggacagcctcaccaaacagagcaggaaaaggagtcatagaacagaca
gaaaaatctcatccaagaagccctaacgtgttatctgtcgctttgagtcaaagaactaca
attcctgaggaagaactaaatccaaagatactagctttgcagaatgctcagagaaagcga
aaaatggaacatgatggttcactttttcaagcagtaggaattggaacattattacagcag
ccagacgatcatgcagctactactacatcactttcttggaaacgtgtaaaaggatgcaaa
tctagtgaacagaatggaatggagcaaaagacaattattttaataccctctgatttagca
tgtagactgctggggcaatcaatggatgaaagtggattaccacagctgaccagttatgat
tgtgaagttaatgctcctatacaaggcagcagaaacctactgcagggtgaagaattactc
agagctttggatcaagttaactga
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