KEGG   Rhinopithecus bieti (black snub-nosed monkey): 108544555
Entry
108544555         CDS       T04641                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
rbb  Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03013  Nucleocytoplasmic transport
rbb04141  Protein processing in endoplasmic reticulum
rbb04150  mTOR signaling pathway
rbb05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rbb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108544555
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108544555
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    108544555
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    108544555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rbb03019]
    108544555
   04131 Membrane trafficking [BR:rbb04131]
    108544555
Messenger RNA biogenesis [BR:rbb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108544555
Membrane trafficking [BR:rbb04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    108544555
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108544555
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    108544555
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML NBCH_WD40
Other DBs
NCBI-GeneID: 108544555
NCBI-ProteinID: XP_017751241
LinkDB
Position
Unknown
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLKGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVTWAPAVVPGSLIDQPSGQKPNYIK
RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDATGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASVTEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggatacctcccatgaggacatgattcacgacgcccag
atggactactacggcacccgcctggcaacctgctcatcagacaggtccgtcaaaatcttt
gatgtgcgcaatggagggcagatccttatcgccgacctcaagggtcatgagggtcctgtg
tggcaagtggcctgggctcaccccatgtatggcaacatcctggcatcgtgctcctatgac
cggaaagtcattatctggagagaggaaaatggcacctgggagaagagccacgagcacgcg
ggacacgactcctcagtgaactcggtgtgctgggccccccatgactatggcctgatcctg
gcctgtgggagctcagatggggccatctccctgctgacgtacaccggggaaggccaatgg
gaagtaaagaagatcaacaacgctcacaccattggctgcaatgccgtcacctgggcccct
gctgttgtacctggaagcctcatagaccagccttcggggcagaaacccaattacatcaag
aggtttgcatcaggtggctgtgacaacctcatcaagctgtggaaggaggaggaggacggc
cagtggaaggaggagcagaagctagaagcgcacagtgactgggttcgagatgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagctgctcccaggacggtcgtgtg
ttcatttggacctgtgatgatgccacaggcaatacatggtcccctaaattgttgcacaag
ttcaatgatgtggtgtggcatgtgagctggtccatcacagccaacatcctggctgtctcc
ggtggagacaataaggtgaccctgtggaaggagtcggttgacgggcagtgggtgtgcatc
agtgatgtcaacaagggccagggctccgtgtcagcgtcagtcacagagggccagcagaac
gagcagtga

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