Mucinivorans hirudinis: BN938_0354
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Entry
BN938_0354 CDS
T03205
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA/Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rbc
Mucinivorans hirudinis
Pathway
rbc03420
Nucleotide excision repair
rbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN938_0354
03430 Mismatch repair
BN938_0354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbc03400
]
BN938_0354
Enzymes [BR:
rbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN938_0354
DNA repair and recombination proteins [BR:
rbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN938_0354
MMR (mismatch excision repair)
Other MMR factors
BN938_0354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_22
ResIII
EZH2_WD-Binding
NPHP3_N
Sec66
Motif
Other DBs
NCBI-ProteinID:
CDN30459
UniProt:
A0A060RAQ0
LinkDB
All DBs
Position
complement(347824..349644)
Genome browser
AA seq
606 aa
AA seq
DB search
MYFENDERLAYLGARGKVILNACPGSGKTTTIAKKILDLENQNEIGGHSGVACLSFTNSA
KDEINEAYRKLSGKSLQFPNHVSTIDSFINKFITLPFYNLLNRDFNRPKILDQTNILDDM
WKTTYIDRNGKMQDGLRRPLNDPEYKAKNNRSIFHLYPPSEIRIEPNGAFSINGNQPSAD
KVDRANFNKYCQLIKNKQFTKGLISTGDSAYIALHLLKNNPKISKWLSLRFPFIIIDEAQ
DNSIMQHAIFEELTNQGLNNIELIGDPYQSLYEWRDANPTEFLRKYDEDETWQSFDLTDN
RRSPQNIVDVFSKVRRQEDSKINSVGCQELEESIVVYKYTANNHQLIIKHYDDFCSKNKY
LNSCIVVRGNSLKDLLLGKKSEQRPWNVELPKSIIYAKNLYLSGDIKNAIKEIRTICIPL
IHSDNTDYHSLKEIEKEKSIDPSFNSLMITILAELPSFSLSVSDWTIKTQVFLKEQLNLN
YDVDFNLRNRKSKYLEMTTLDESVEIHFKKSYSAFNIPITTIHQVKGQTLDSILVFFNEK
KHKDNITFENISNTENIFPDETKRLIYVALSRPKHLLAMAFPESITNGELINKFGEKIRI
IEENEL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgaaaatgatgaaagattagcttatttaggagcaagaggaaaagtgatttta
aatgcttgccctggtagtggaaaaacaacgaccattgcaaagaagattttagatttagaa
aatcagaatgagattggaggtcattcaggtgtagcttgtttatcgttcacaaactctgct
aaagacgaaattaatgaagcgtatagaaaattgagtgggaaatcgcttcaatttcctaat
cacgtatcaacaattgatagtttcatcaacaaattcattacgctgccattttacaatttg
cttaatcgtgattttaaccgaccaaagatacttgaccagacaaatatcttggatgacatg
tggaaaacaacttatattgaccgaaatgggaaaatgcaagatggcttaagaagaccattg
aacgatccagaatacaaggcaaaaaacaacagaagtatatttcatctttacccaccaagc
gaaataagaattgagcctaatggtgcattttcaatcaatgggaatcaaccatctgctgat
aaagtcgacagggcaaattttaacaagtattgtcagcttattaaaaacaagcaatttaca
aaaggacttatatcaacaggtgattctgcatatattgcacttcatttactaaagaataat
ccaaagataagtaaatggcttagcttgagatttccatttataatcatagatgaggctcaa
gataattcgataatgcaacacgcaatattcgaagaactgacaaatcaaggcttaaacaat
attgaactaattggagacccttatcaaagtttatatgaatggagagatgcaaatccaact
gaatttttaagaaagtatgatgaagatgaaacgtggcagtcgtttgatttaacagataat
agacgttctccgcaaaatatcgttgatgttttctcaaaagtgagaaggcaggaagattca
aaaatcaatagtgttggttgtcaagaattagaagaatccattgttgtctacaaatataca
gccaataatcatcaattgataataaaacattacgatgatttttgctcaaaaaacaaatat
cttaacagctgtattgttgtgcgagggaattcattgaaagatttgctgttaggaaaaaaa
tcagaacaaagaccttggaatgttgagttgccgaaaagtataatttatgctaaaaattta
tatttgagcggtgatataaaaaatgcaatcaaagaaatacgaacaatttgtattccttta
attcattctgataatactgactaccacagtttaaaagagattgaaaaagaaaaaagtata
gacccttcattcaattctctaatgataactattcttgctgaattacctagcttttcttta
tctgttagtgattggacaataaaaactcaagtatttttaaaagaacaactgaatttaaat
tacgatgtagacttcaacttaaggaatagaaaatcaaaatatttagaaatgactacattg
gatgaaagtgttgaaatccatttcaagaaatcatattcagcctttaatattcccataaca
acaatacatcaagtaaaaggtcagacattagattcaatacttgttttctttaatgaaaag
aaacataaagacaatatcacttttgaaaatatttcaaatactgaaaatatatttccagat
gaaacaaaaagattaatctatgttgctttatctagaccaaaacatttattagcaatggcg
tttccagaatcaataacaaacggagagcttataaataaatttggtgaaaaaattagaatt
atagaagaaaatgaattatga
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