Mucinivorans hirudinis: BN938_0910
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Entry
BN938_0910 CDS
T03205
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rbc
Mucinivorans hirudinis
Pathway
rbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN938_0910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbc03019
]
BN938_0910
03110 Chaperones and folding catalysts [BR:
rbc03110
]
BN938_0910
03029 Mitochondrial biogenesis [BR:
rbc03029
]
BN938_0910
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbc04147
]
BN938_0910
Enzymes [BR:
rbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN938_0910
Messenger RNA biogenesis [BR:
rbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN938_0910
Chaperones and folding catalysts [BR:
rbc03110
]
Heat shock proteins
HSP60 / Chaperonin
BN938_0910
Mitochondrial biogenesis [BR:
rbc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN938_0910
Exosome [BR:
rbc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN938_0910
Exosomal proteins of other body fluids (saliva and urine)
BN938_0910
Exosomal proteins of breast cancer cells
BN938_0910
Exosomal proteins of colorectal cancer cells
BN938_0910
Exosomal proteins of bladder cancer cells
BN938_0910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
NNH2
Motif
Other DBs
NCBI-ProteinID:
CDN31010
UniProt:
A0A060R769
LinkDB
All DBs
Position
874437..876065
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFNAEAREGLKAGVDALANAVKVTLGPKGRNVVIDKKFGSPQITKDGVTVAKEIE
LEDRTANMGAQLVKEVASKTADDAGDGTTTATVLAQAIISTGVKNVTAGANPMDLKRGID
KAVAAVVKNLQEQSQSVGDDINKVQQVATISANNDKAIGALIAEAMGKVKKEGVITVEEA
KGTETHVDVVEGMQFDRGYVSPYFITDTEKMQAELEKPYILITDKKVSTMKEILGVLEPV
AQSGRSLLIIAEDVDGEALSSLVLNKLRGTLKIAAVKAPGFGDRRKEMLQDIAILTGGQV
VSEETGMKLDQATIEMLGSAEKITLGKDNTTIVNGAGEKVSIDQRIAQIRKQIETTTSDY
DREKLQERLAKMAGGVAVLYIGAATEVEMKEKKDRVDDALAATRAAVEEGIIPGGGVAFI
RAAAAVAGLKGENEDENTGIQIVIRAIEEPLRQIVANAGGEGSVVVNKVKEGKADFGYNA
RTDVYENMYAAGIIDPTKVARVALENAASVASMFLTTECVLVDIKEETPAMPPMGGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattcaacgcagaagctcgcgaaggtttgaaagctggcgtggac
gcattggcgaatgcagtaaaagtaacactaggacctaagggtcgtaacgtggtgatagac
aaaaagtttggttcgccacaaattaccaaagacggtgtaaccgttgctaaagagattgag
ttggaagaccgcacggcaaatatgggtgcacaacttgtaaaggaggttgcaagcaagacg
gctgacgatgcgggcgatggtactacaacagcaactgttctggcacaggctattatctcg
acaggggtgaaaaacgtaactgccggtgcaaatcctatggatttgaagcgcggtatcgac
aaagctgttgctgcggttgttaaaaacctccaagagcaaagccaatctgtgggcgatgat
attaataaggttcagcaagttgcgactatctccgccaataacgacaaagctatcggggca
ctgattgccgaggctatgggcaaagttaagaaagagggtgtaatcaccgtagaagaggct
aagggtactgaaactcacgttgatgtggttgaaggtatgcagttcgacaggggctatgtc
tcgccttactttatcaccgacaccgaaaagatgcaggcagagctcgaaaaaccttacatc
ttgattaccgacaaaaaggtatcgacaatgaaggagattttgggcgtgctagaacctgtt
gcgcaatcgggtcgttcgttgttgattattgctgaagatgttgatggcgaggcactttct
tcacttgttcttaataaattgcgtggcacactaaaaattgcagccgtaaaagctccgggc
tttggcgaccgccgcaaagagatgttgcaggatattgcaatactaacaggtggtcaggtg
gttagcgaggagacaggaatgaagttagaccaagctaccatcgagatgttgggctctgcc
gaaaagattactttgggtaaggacaatacgacaatcgtaaacggcgcaggcgagaaggtg
tctatcgaccaacgtatagcacaaattcgcaagcaaatagaaactacaacttcggattac
gaccgcgaaaaactccaagaacgtcttgccaaaatggcagggggtgtggcggtgctctac
attggtgctgcaacggaggtagagatgaaggagaagaaagaccgcgttgatgacgcactg
gcagcaacgcgtgctgccgttgaagagggtattatccccggcggcggtgttgcatttatt
cgtgcggcggcggcagtggcgggtcttaagggcgaaaacgaggatgaaaatacgggcatc
caaatagtgattcgcgccattgaagagcctcttcgccagattgttgccaatgcaggtggc
gaaggttcggttgttgtaaacaaggtgaaagagggcaaggctgatttcggttacaatgct
cgcaccgatgtttacgaaaatatgtatgcagccggcattatcgacccaacgaaggttgca
cgcgtagcattggagaatgccgcttcggttgcttcgatgttcctgaccaccgaatgcgtt
ttggtggacattaaggaggagactcccgcaatgcctccaatgggcgggggaatgggtgga
atgatgtag
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