Mucinivorans hirudinis: BN938_1118
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Entry
BN938_1118 CDS
T03205
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
rbc
Mucinivorans hirudinis
Pathway
rbc02020
Two-component system
rbc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rbc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN938_1118
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN938_1118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbc03021
]
BN938_1118
Transcription machinery [BR:
rbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN938_1118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
NES_C_h
Motif
Other DBs
NCBI-ProteinID:
CDN31213
UniProt:
A0A060RBQ4
LinkDB
All DBs
Position
complement(1107256..1108644)
Genome browser
AA seq
462 aa
AA seq
DB search
MALTQSLEQRLQQKLSPQQIQGIKLLELPNIVLEARIKQEIESNPVLEELSSEEPDDNTP
STIEDYIRNEEVANSYKVRSNNFSKENESFTPTIAQSISLADFLEEQLTYTELNDRERVI
ADYVIGSLDDDGYLRRDINSVIDDLAFSQFMDVTVAEVEQVIRTIQQLDPAGICARSLDE
CLLIQLRQIKKQSRSVGVAIKVLSHYYDEFTKKHYEKIMSRMGIDEAELRDAIEVIVSLN
PKPASGYAEERANAAPVVTPDFLLDYNDGEFDLSLTSGRVPELKISKSYLKMAEQGDKDA
AEFVRSKIESAKWFIAAVKQRQQTLLRTMRAILQFQHDYFEEGDERLLKPMILRDISDIS
GFDVSTISRVVNSKYIQTHFGIFPLKYFFSERILTESGDEVSTREIKRIVSECVADENPA
EPLTDEALMEVLTEQGFKIARRTVAKYREMLGIPVSRLRRKM
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcacttactcagagtttagagcagaggttacagcagaagttgtctccgcagcagata
cagggtatcaagctgttggagttgcccaacattgtccttgaggctcgcattaagcaggag
attgagagcaatcccgttcttgaggaacttagcagcgaagagcccgacgataacacccca
tcgaccatcgaggattatatacgtaatgaggaggtggcaaactcatataaggttcgctcg
aacaatttctcgaaagagaatgagagtttcacccccaccatcgcacaaagtatctcgctt
gccgactttctcgaagaacaactcacatataccgagctcaacgacagagagagagtgata
gccgactacgtaatcggctctttggacgatgatggctatctacggcgcgatatcaactcg
gtgatagatgatttggctttttcccaatttatggatgtgacggtggcagaggtagagcag
gtgattcgcactatccaacagcttgaccctgccggcatttgtgctcgttcgttggatgag
tgcctactcattcagttgcggcaaatcaaaaagcagagccgctctgtgggcgtggctatc
aaggttctgagccactattatgatgagttcaccaagaaacattacgaaaagataatgtcg
cgtatgggcattgatgaggcagagcttcgcgatgctattgaggttatcgtcagtctcaac
ccaaagccggcaagcggatatgccgaggagcgggcaaatgctgctccggttgttacgccc
gattttctgctcgattataatgacggagagttcgacctttcgctcacttcggggcgtgtt
cccgagttgaagattagcaagagctacttgaagatggcggagcagggcgataaggatgca
gcagagtttgtccgctccaaaatagagtcggcaaagtggtttattgctgctgtcaagcag
cggcaacagacacttctgcgcacgatgagagccattctccaattccaacacgactacttt
gaggagggtgacgaaaggctgctcaagcctatgattctcagggatatttcagatatttct
ggtttcgatgtatcgaccatttcgcgcgttgtgaatagcaagtacatacagactcatttc
ggaattttcccgctcaagtactttttttcggaacggattctcaccgagtcgggcgacgag
gtttccacgcgggagattaaacgcattgtcagcgagtgtgttgccgacgaaaaccctgcc
gagccccttacggacgaagctctgatggaggtgctcacggagcaaggtttcaagattgcc
cgccgcacggtggcgaaatatcgcgaaatgttgggcattccggtatctcgacttaggcga
aagatgtga
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