Mucinivorans hirudinis: BN938_1378
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Entry
BN938_1378 CDS
T03205
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rbc
Mucinivorans hirudinis
Pathway
rbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN938_1378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbc03019
]
BN938_1378
03016 Transfer RNA biogenesis [BR:
rbc03016
]
BN938_1378
Enzymes [BR:
rbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BN938_1378
Messenger RNA biogenesis [BR:
rbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN938_1378
Transfer RNA biogenesis [BR:
rbc03016
]
Prokaryotic type
tRNA degradation factors
BN938_1378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
RNase_II_C_S1
KH-I_KHDC4-BBP
TIMP
S1_RRP5
HutF_N
Motif
Other DBs
NCBI-ProteinID:
CDN31465
UniProt:
A0A060R7Y8
LinkDB
All DBs
Position
complement(1374221..1376338)
Genome browser
AA seq
705 aa
AA seq
DB search
MYNAIQKKIALSGGRTIEIETGKLAKQADGSVVVRQGDTMLLATVVCAKDAKEDVDFMPL
SVEYKEKYAANGRFPGGFLKREARPSDYEILVSRLIDRALRPLFPSDFHAEVFVTVNLIS
ADPDIQPDALAGLAASAALAVSDVPFEGPISEVRVARINGEFVVNPTFSQMADCDLDIIV
AATVDNIMMVEGEMKEVSESVMLEAIKVAHNEIKIQCQAQIELMAEVGKTTKREYCHEKN
DDDLRAAVVAATYDRVYEVAKSMSAKHERSEKFDAIEAEYMATFSQEELAEKKSLIKRYF
HDDVLKKAMRAMILDEGVRLDGRKTNEIRPIWCEVGYLPAPHGSAIFTRGETQSLTTVTL
GTKLDEKMIDDVLREGSEKFVLHYNFPPFSTGEAKMARGTSRREVGHGNLALRALKPMVP
VGEECPYAIRVVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIAEKGKFA
VLSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEVLEQALEQARQGRLHILGK
ITETLAEPREDYKPHVPRIVQIAIPKDFIGAVIGPGGKVIQELQKATNTTITITEVGDKG
IVDIFSADKAGIDQALAKIKGITAVPEIGEVYEGKVKSIMAFGAFVEFLPGKDALLHISE
IKHERVDTMEQSGLKEGDIIQVKLIGADPKTGKLKLSRKALLPKQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcaattcaaaagaaaattgcactctcggggggacgcaccatcgagattgaa
accggcaagttggcgaaacaggctgacggttcggtggttgttcgtcagggggacacaatg
ttgttggctacggttgtctgtgccaaggatgctaaggaggatgtagattttatgcctctg
tcggtagagtacaaagagaaatatgcggcgaacggtcgttttccgggtggcttcctcaaa
cgtgaagcgcgcccatcggactacgaaattttggtgtcgcgccttatcgaccgcgcactg
cgccctctttttccttcggattttcacgccgaggtgttcgtgacggtcaatcttatttcg
gcagaccccgacattcaacccgatgccttggctggcttggctgcatcggcggcactggct
gtgagcgacgttcccttcgagggtccaatctcagaggttcgagtggcgcgcatcaacgga
gaatttgtcgtaaatcctacattctcgcaaatggcggattgtgacctagatattatcgtg
gcggcaacggtggataatattatgatggtagagggtgagatgaaagaggtgtcggaaagc
gttatgttggaggcaatcaaggttgctcacaacgaaatcaagatacagtgtcaggctcaa
atcgagcttatggcagaggttggcaagacaacaaaacgcgaatattgccacgaaaagaat
gatgatgatttgcgcgcggctgtcgtagcggctacttatgatagggtgtacgaggtcgca
aaatctatgtccgcaaagcacgagaggtctgaaaaattcgacgctatcgaggcagaatat
atggcaactttctcgcaagaggagttggcagagaaaaaatctttgataaaaagatacttc
cacgacgatgttctaaaaaaagctatgcgtgctatgatactcgatgagggagtacgcttg
gacgggcgtaaaaccaatgaaatcagacctatatggtgtgaagttggctaccttcccgcg
cctcacggttctgcaattttcacacgcggcgagacacagtctttgacaacggtaactctt
ggcacgaaacttgatgagaagatgattgacgacgttttgcgcgaaggttcagaaaaattt
gttttgcactataacttccccccattctccaccggcgaggcgaaaatggctcgcggaact
tcacgccgtgaggtgggacacggcaaccttgccttgcgtgccctcaaaccgatggtacct
gtgggagaggagtgtccatatgcgattcgtgtggtgtcggatattttggagtcgaacggc
tcgtcgtcaatggctactgtttgtgccggtactttggcgctgatggatgcgggtgtgaaa
atcaaaaagcctgtttcgggtattgcgatgggtttgatagcagaaaaaggtaaatttgca
gttctttcggatattttgggcgacgaagaccacttgggcgatatggacttcaaagtgacc
ggtacgaaggatggtattactgccacccaaatggatattaaggtagatggtctctcgtat
gaggttctcgagcaggctttagagcaggcgcgtcagggtcgtctacacattttgggtaaa
attaccgagacgttggctgagccacgtgaggattacaagccacacgtaccacgcatcgtt
cagatagccattccaaaggattttataggtgcggttatcggacctggcggtaaggtgata
caggagcttcaaaaagctacaaatactacaattactattactgaggttggtgataaaggt
attgtcgatattttctcggcagacaaggcgggcatcgaccaggctttggcgaagattaaa
ggtatcacggctgtacccgaaatcggcgaggtctatgagggcaaggttaagtcgattatg
gctttcggtgcttttgttgagttcttacccggcaaggatgcgttgttacacatctcggaa
atcaagcacgagcgcgttgatacaatggaacagagcggtttgaaagagggtgacatcatc
caagtgaaactaattggcgctgaccctaaaacgggtaaattgaaactttcgcgcaaagca
ttgctgccaaaacagtag
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