Mucinivorans hirudinis: BN938_2411
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Entry
BN938_2411 CDS
T03205
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rbc
Mucinivorans hirudinis
Pathway
rbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN938_2411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbc03019
]
BN938_2411
Enzymes [BR:
rbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BN938_2411
Messenger RNA biogenesis [BR:
rbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN938_2411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
P-loop_SecA
CMS1
DUF7711
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDN32481
UniProt:
A0A060RA26
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All DBs
Position
2459585..2460715
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AA seq
376 aa
AA seq
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MTFKELNISEPVMRALEEKNYDTPTPIQQQAIPVALQGRDMLGIAQTGTGKTAAFAIPII
EHLASNLSQNRKDKRHIRALVLTPTRELAIQIEEAFACYGKYTGLKHTVIFGGVKQKPQT
DSLNRGTDILIATPGRLLDLISQGFIHLDTLTHFVLDEADRMLDMGFIHDIRRLLPMLPK
NKQTMLFSATMPTEIVSISKSLLDRPARVEVAPVASVVDAIEQHVYFVEKPQKIELLVSV
LDEQSDKSILIFSRTKHGADKIARILNKRHIGCEAIHGNKSQNARQSALSNFKSGKTRII
VATDIAARGIDIQNLGVVINFDLPDVAETYVHRIGRTGRAGRSGVAFTFCSQDEHTMVRD
IQQLMGKKLNTVLIPA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaggaacttaatatttctgagcccgttatgcgggctttagaggagaagaat
tacgacacaccaacacctattcagcagcaggcaattcctgtggcattgcaaggaagagat
atgctcggcatagcgcagaccggtacgggaaagacggcagcatttgcgattcccattatc
gaacatctggcgagcaacctgtctcaaaacagaaaagataaacgccacatacgagcactt
gtactaactcccacgcgtgagcttgccatccagattgaggaggcatttgcctgctacgga
aaatacacggggttgaaacacaccgttattttcggtggagtgaaacagaagccacagacc
gatagcctcaaccgaggcactgatatattgatagcgacgcccggtagactattagacttg
atatcccaggggtttatacatctcgatactttgactcactttgttttggacgaagcagac
cgtatgttggatatgggttttatccacgacatccgacgacttttaccgatgttgcctaaa
aataaacagacgatgctcttttcggcaacaatgcccacagagattgtttccatatccaag
agtctcttggatagacccgcaagggtggaggttgcgccggtggcttcggtggttgatgct
atcgaacagcacgtctactttgtggagaaaccgcagaagatagagcttttggtgagtgtg
ttggacgagcagagcgataagtcgatacttattttttcgcgcaccaagcacggtgcggat
aagatagcacggatacttaataagagacatatcggttgtgaggctatccacggcaacaag
tcgcagaatgcgcgtcagagcgcgctcagcaacttcaagtcaggcaagacacgcattatt
gtggctactgatattgcggctcgcggcattgatatacaaaaccttggcgtggtcattaac
tttgatttgccggatgttgccgagacctatgttcaccgaattggacgcaccggacgtgcc
ggtaggagtggtgtggcgttcacattctgttcgcaggacgagcacacaatggtgcgcgac
attcaacaattaatgggtaagaaacttaatacggtattgataccggcatag
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