Mucinivorans hirudinis: BN938_2972
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Entry
BN938_2972 CDS
T03205
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rbc
Mucinivorans hirudinis
Pathway
rbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN938_2972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbc03019
]
BN938_2972
03400 DNA repair and recombination proteins [BR:
rbc03400
]
BN938_2972
Enzymes [BR:
rbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN938_2972
Messenger RNA biogenesis [BR:
rbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN938_2972
DNA repair and recombination proteins [BR:
rbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN938_2972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
RecQ_Zn_bind
HRDC
HTH_40
ResIII
Motif
Other DBs
NCBI-ProteinID:
CDN33037
UniProt:
A0A060RBR6
LinkDB
All DBs
Position
complement(3033595..3035871)
Genome browser
AA seq
758 aa
AA seq
DB search
MVGIYEKFTNFSFPNCNYYTNKMSKRNIEAGSDTLFDSLKRYFGFDQFKGNQEDVIRNLL
AGNDTFVLMPTGGGKSLCYQLPALMMEGLAIVISPLIALMKNQVDAMRGFSTEEGVAHFL
NSSLNKSAALKVREDVLAGKTKLLYFAPESLTKEENVEFLRKVKISFYAIDEAHCISEWG
HDFRPEYRRIRPIIAEIGQAPLIALTATATPKVQLDIQKNLGMMNAKVFKSSFNRQNLYY
EVRPKENTTKEIIRYIKKHEGKSGIIYCLSRKKVEELADLLRVNDIKALPYHAGIDATTR
AENQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRGGRDGGVGE
CITFYSYKDILKLEKFMQGKPLAEQEIGKLLLSETVAYAESTICRRKLILHYFGEKYEQE
NCGSCDNCLNPVAMVEAKDDMALLLDVLATVGSEFKPDHLVNILIGRNNNIIKSYNHNEL
EEFGAGEKKEEGYWSAVLRQGLIRGYISKDIENYGSIAITERGREFVEKPISVKVSKDRI
FEESDIEDSVATGPKGSGGSAAADEELFSMLKDLRKQLSKRLNLPPFVIFQDPSLEDMAI
QYPVSMEDMQHIQGVGMGKARKFAGEFIKLIARYVEEKEIVRPQDLVLRSVVNKSGNKVF
IIQSVDKKMDLVDIAEAKGMSGDDLLDELEAIVNSGTKININYYIEREIDEDKVEDIIDY
FREAESDSVAEAEKELGAGYTQEEIRLVRIKFLSEMGN
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggttggaatttacgaaaaatttactaattttagttttccaaattgtaactattatacc
aataaaatgtcaaaaaggaacattgaagccggtagtgacactctgttcgatagcttaaaa
cgttatttcgggtttgaccaattcaaaggaaatcaagaagatgtcattcgcaacctgctt
gccggaaatgacacgtttgttctgatgcccaccggtggcggaaagtcgttgtgttatcag
ttgcccgctctgatgatggaggggcttgccattgttatatctccgctgattgccctgatg
aaaaatcaggtggatgctatgcgtggcttctccacggaggagggggtcgcgcactttcta
aatagctcactcaacaaatctgccgcactcaaagtgcgcgaagatgtgttggcgggcaaa
acaaagttgctctattttgctcccgaatcgctcactaaagaggagaatgttgagtttctt
agaaaggtgaaaatctcgttctatgccatagacgaagcccactgtatttcggaatggggg
cacgacttccgccccgagtatcgtcgcattcgccccataattgccgagataggtcaagca
ccgctcatcgccctgacagcaacggcaacacctaaggttcaactagatatacaaaaaaac
cttggtatgatgaatgccaaggtttttaagagttcctttaatcgtcagaacctctactac
gaggttcgccccaaggagaataccaccaaggagataatccgatacatcaaaaagcacgag
ggaaagtcgggcatcatctactgtctctcgcgcaagaaggtggaggagttagccgatttg
ttgcgcgttaacgacatcaaagccctaccctatcacgccggtatagatgccacaacgcgt
gccgaaaatcaagataagttcctgatggaggaggtggatgttattgtggctaccattgcc
tttggtatgggcatcgacaagccggatgtgcgctttgtcatccactacgacattcccaaa
tctctcgaagggtactatcaggagacggggcgcggcggacgtgatggcggcgtgggagag
tgtatcaccttttacagctacaaggatattctcaaacttgagaaatttatgcagggtaag
cctttggctgagcaagaaataggaaaactccttctcagcgagactgttgcctatgccgag
agcaccatttgccgccgaaaactcatattgcactactttggcgaaaagtatgagcaagag
aactgcggttcgtgcgacaactgcttgaatccggtggcaatggtggaggcgaaggatgat
atggcattgctgcttgacgtgttggcaacggtggggagtgagttcaaaccagaccatctt
gtgaatatattgatagggcgtaacaacaatatcatcaaatcatacaaccacaatgagctg
gaggaattcggcgcgggcgagaagaaggaggagggatattggagtgccgttttgcgtcag
ggacttatccggggatacataagcaaggatattgaaaattacggctcgatagctataacc
gaaagggggcgcgagtttgtcgaaaagcctatttcggtgaaggtgagcaaggacagaatt
tttgaggagagtgatatcgaggatagcgttgcaaccgggccgaagggcagcggcggaagt
gctgcggctgacgaggagctcttttcgatgctcaaagacctacgcaaacagttgagcaag
aggctcaatctgccgccgtttgtgattttccaagacccctcgctggaggatatggcaatt
cagtatcccgtctcgatggaggatatgcagcatatccaaggtgtgggtatgggcaaggcg
cgcaagtttgcaggtgagtttatcaaactcatagccagatatgtagaggagaaagagatt
gtgcgtccgcaggatttagtgctccgttcggtggtcaataagagtggtaacaaggtgttt
atcatacaatctgtggacaagaagatggatttggtggatattgccgaggcaaagggtatg
agcggcgatgatcttctagacgagttggaggcgattgtaaactcgggcacaaagataaat
attaactactacatcgagcgggagattgacgaagacaaggtcgaagatattatcgactac
ttccgcgaggcggagagcgactcggttgccgaagccgaaaaggagctcggcgccggatat
actcaggaagaaataaggttggtgcgaattaagtttctaagcgaaatggggaactaa
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