Aerosticca soli: ALSL_0176
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Entry
ALSL_0176 CDS
T06043
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rbd
Aerosticca soli
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbd03032
]
ALSL_0176
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_0176
Enzymes [BR:
rbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ALSL_0176
DNA replication proteins [BR:
rbd03032
]
Prokaryotic type
DNA Topoisomerases
ALSL_0176
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ALSL_0176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BBD78849
UniProt:
A0A2Z6E2P4
LinkDB
All DBs
Position
185411..187900
Genome browser
AA seq
829 aa
AA seq
DB search
MAKHLLIVESPAKAKTINKYLGKDFQVLASYGHVRDLKPKEGAVDPEHGFAMNYEVIERN
EKHVEAITRAAKAAEDIYLATDLDREGEAISWHISEILKERGVLDGKPLHRVVFSEITPK
AIREAVAHPRGLSRELIDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFRAREYWTIEAKLKHPQGDFGARLVELYGKKFEQFDLPDEERAQAARKVLEK
AAHGRLTVSAVGSKERRRRPAPPFTTSTLQQEAARKLGFTTSRTMRIAQSLYEGVALGSE
GNVGLITYMRTDSTALSAEAVEELRALIARDFGRQALPEHAQVYKTRAKNAQEAHEAIRP
TSAMRTPREVAPFLNDEQRKLYELIWKRTVACQMIHATLNTVTVDFALPDAEGGPAAFRA
SGTTVVDPGFLAVYEEGRDTKSEEDEDEGRRLPRLAVGDVVPLEAVVASQHFTEPPPRYS
EASLVKALEEYGIGRPSTYASIIQVLQNREYVYLDNRRFRPTDVGRAVSKFLSQHFTRYV
DYDFTARMEDELDAVSRGEQAWVPLMERFWQPFKRQVEEKTETVDRSEATGARELGIDPK
SGKPVSVRLGRYGPYAQIGDKDSDEKLQFASLRPGQSMHTLTLEEALELFKLPRTLGRAE
DGEEVTVGVGRFGPFVKHGTTYASLKADDDPYTIELPRALELLKEKREAAANRVIRDFGN
GVQVLNGRYGPYITDGEKNARIPKELEPRDLTAEQCAQLLAAAPAKKGRFAARKTTAAAS
SAKPAAAAGKTVAKKAAAKQSTGKKTAGKKTATKKSAARKTTAKKGPDR
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatctcctcatcgtcgagtcgcccgccaaggcgaagacgatcaacaagtat
ctcggcaaggacttccaggtcctcgcctcctacggccacgtgcgcgacctcaagcccaag
gagggcgcggtcgatcccgagcacggctttgccatgaattacgaggtgatcgagcgcaac
gagaaacacgtcgaggcgatcacccgggcggccaaggccgccgaggacatctatctcgcc
accgacttggaccgcgagggcgaggccatttcctggcacatcagcgagatcctcaaggag
cgcggggtgctcgacggcaagcccttgcaccgggtggtgttctccgagatcacgcccaag
gcgatccgcgaggcggtggcccacccgcgcgggctctcgcgcgagctcatcgacgcccag
caggcgcgccgcgcgctcgattacctggtcggcttcaacctttccccggtgctctggcgc
aaggtccagcgcgggctgtcggccgggcgcgtgcagagcccggcgctgcgcatgatcgtc
gagcgcgaggaggagatcgaagccttccgggcccgcgaatactggaccatcgaggcgaag
ctcaagcatccgcagggcgatttcggcgcccgcctggtcgagctctacggcaagaagttc
gagcagttcgacctgcccgacgaggaacgcgcgcaggccgcgcgcaaggtgctggaaaag
gccgcgcacgggcggctgacggtgagcgcggtcggcagcaaggaacgccgccgccggccc
gcgccgccgttcaccacctccacgctgcagcaggaggcggcgcgcaagttgggcttcacc
accagtcgcaccatgcgcatcgcgcagagcctgtacgaaggcgtggcgctgggcagcgaa
ggcaacgtcggcctcatcacctacatgcgtaccgactccaccgcgctctcggccgaggcg
gtggaggagctgcgcgcgctgatcgcccgcgacttcggccgccaggcgctgcccgagcac
gcgcaggtctacaagacccgcgccaagaatgcgcaggaggcgcacgaggcgatccgtccg
acctcggcgatgcgcaccccgcgcgaggtcgcgccgttcctcaacgacgagcagcgcaag
ctctacgagctcatctggaagcgcaccgtggcctgccagatgatccacgccaccctcaac
acggtgaccgtggatttcgccctgcccgacgccgagggcggtccggcggcctttcgcgcc
agcggcaccaccgtggtcgatccgggctttctggccgtttacgaggaaggccgcgacacc
aagagcgaggaggacgaggacgaaggccggcgcctgcccagactcgccgtgggcgacgtg
gtgccgctcgaagccgtggtggccagccagcacttcaccgagccgccgccgcgctattcc
gaggcgagcctggtcaaggcgctggaggagtacggcatcggccgcccgtccacctacgcc
agcatcatccaggtgctgcagaaccgcgaatacgtctatctcgacaaccgccgcttccgg
cccaccgacgtcggccgcgcggtgagcaagttcctgagccagcacttcacccgctacgtg
gattacgacttcaccgcgcgcatggaggacgagctcgacgcggtcagccgcggcgaacag
gcctgggtgccgctgatggaacgcttctggcagccgttcaagcgccaggtggaggaaaag
accgagaccgtcgaccgcagcgaggccaccggcgcgcgcgagctcggcatcgaccccaag
agcggcaagccggtatcggtgcggctgggccgctacgggccgtatgcgcagatcggcgac
aaggacagcgacgagaagctgcagttcgccagcctgcgcccgggccagagcatgcacacc
ctcacgctcgaggaggcgctcgagctcttcaagctgccgcgcacgctcggccgcgccgag
gacggcgaggaagtgaccgtcggcgtgggccgcttcggcccgttcgtcaagcacggcact
acctacgcctcgctgaaggcggacgacgacccctacaccatcgagttgccgcgcgcgctc
gagcttctcaaggaaaagcgcgaggccgcggccaaccgcgtgatccgcgatttcggcaac
ggcgtgcaggtgttgaacggccgctacggcccctacatcaccgacggcgagaagaacgcc
cgcattcccaaggagctcgagcccagggacctcaccgccgagcaatgcgcgcaactcctc
gccgccgcgccggcgaagaaggggcgcttcgccgcgcgcaagaccacggctgcggcatcg
tcggccaagccggccgccgcggccgggaaaacggtcgcgaaaaaggccgccgcgaagcaa
tccacgggcaaaaaaaccgcgggcaaaaaaaccgccaccaagaagtccgccgcacgcaag
acgacggcgaagaaaggcccggacaggtga
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