Aerosticca soli: ALSL_0653
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Entry
ALSL_0653 CDS
T06043
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rbd
Aerosticca soli
Pathway
rbd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ALSL_0653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbd03021
]
ALSL_0653
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_0653
Enzymes [BR:
rbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ALSL_0653
Transcription machinery [BR:
rbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ALSL_0653
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ALSL_0653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BBD79320
UniProt:
A0A2Z6E2M7
LinkDB
All DBs
Position
708283..708537
Genome browser
AA seq
84 aa
AA seq
DB search
MPNRFELVLMATKRARQLAKGAEPAVNPDHDKPTVLALREIAERRIDQATIDEIDRAERE
RAEREALEWAAAEVDDDLSKGGDD
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaaccgtttcgagctcgtgctgatggctaccaagcgcgcccgccagctcgccaag
ggggccgagccggccgtcaaccccgatcatgacaagcccacggtgctcgccctgcgcgag
atcgccgagcggcgcatcgatcaggccacgatcgatgagatcgaccgcgccgaacgcgag
cgtgccgagcgcgaggcattggaatgggcggcagccgaagtcgacgacgatctctccaag
ggcggcgacgactga
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