Aerosticca soli: ALSL_1049
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Entry
ALSL_1049 CDS
T06043
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
rbd
Aerosticca soli
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbd03021
]
ALSL_1049
Transcription machinery [BR:
rbd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ALSL_1049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_RapA
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BBD79712
UniProt:
A0A2Z6E468
LinkDB
All DBs
Position
complement(1118028..1120865)
Genome browser
AA seq
945 aa
AA seq
DB search
MFVPGQRWISTAEPELGLGTVLRVEGRHVQVLFAKAGVLRSYASDSAPLERAEFRPGQRV
AGKGVAFLVERVEIKDGLLIYRGEGRELHEGQLDDEQSVSRADERLIGGRTDPVAQFELR
VEALKRRAQARRSPAWGLGAARIGLLPHQLRVAGIAAARRPPRVLLADEVGLGKTIEAGM
ILARQLATGRAERVLVLLPEPLVYQWFVELWRRFNLPFAIYDEERCEAIACNDPARNPFE
DEQLVIADFGLFEGREERTSQLLAARWDIVVVDEAHHLEWTPAAASPRYALVEKLAAVSP
GLILLTATPEQLGRAGHFARLRLLDPQRYHDLDAYLEETARFRGLSAIADRLQQGLPLTL
AQQAELERAFAGDAHLTALLAEPGRPAHARELLGALIDRHGTGRVMFRNRRAGVGGFPRR
RPVWEAVARAADEARRQAWLAEFHADIQPRPPALSFDYGDDPRLAALLALLERHPQDKFL
LICRSQAKVLALEEALRTRTGIGLARFHEGLGLVQRDRNAAWFAQADGARLLLCSEIGSE
GRNFQFAHHLVLWDLPLDPDLLEQRIGRLDRIGQPHDIDIHLLVPPDSAQHVLARWYDEG
IDAFRESPADGRELLRRFGAPLAALAEAHARGDDERDQELEVLIAETRAAHTELAAMIQE
GRDHLLELAASRDPHADELLPALRAEDDDPGRDAFIQRLMEHFGVHVEELDAHTLVLDPQ
YLSTDALPGLGEGPQAATFDRATALIREDLPLLRLDHPLVQGAMDLVLSGEQGNAAFMID
DALPPRSALLQAVFVLECVADRRLDAERFLPAQALEITVDSRLTERPGFAPSEAAVRKAA
DRAIDVPRYRKMLARLVPPMLERAEAIARERAQATIDAARAEVGARLDAELARLHALRAV
NPAVRPEEIEALAAEREALLEALPGARLRLDAVRFIASADILALR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttcccggtcaacgctggatctccactgccgagcccgagctcggcctcggtacc
gtgctgcgggtggagggtcgccatgtgcaggtcctgttcgccaaggccggcgtgctgcgc
agctatgcgagcgattcggcaccgctcgagcgcgccgaattccggcccggtcagcgcgtc
gccggcaagggcgtggccttcctggtcgaacgcgtggagatcaaggacgggctgctgatc
taccgcggcgaggggcgcgagctgcacgagggccagctcgacgacgagcagagcgtgagc
cgcgccgacgaacgcctgatcggcggccgcaccgatccggtggcgcagttcgaactacgc
gtggaggccctgaagcgccgcgcccaggcgcgacgctcgccggcatgggggctcggcgcg
gcccgtatcggcctgttgccgcaccagttgcgggtggccggcatcgctgccgcgcggcgg
ccgccgcgggtgctgctggccgacgaagtggggctgggcaagaccatcgaggccggcatg
atcctcgcccgccagctcgccaccggccgcgccgaacgggtcctggtgctgctgcccgag
ccgctggtctatcaatggttcgtcgagctctggcggcgcttcaatctgccttttgcgatc
tacgacgaggagcgctgcgaagcgatcgcctgcaacgatcccgcgcgcaatccgttcgag
gacgagcagctggtgatcgccgatttcggtctgttcgagggccgcgaagagcgcacgtcc
cagctgctggcggcccgctgggacatcgtggtggtggacgaggcccatcacctggaatgg
acccctgccgccgccagcccccgctatgcgctggtggaaaagctcgccgccgtgagtccc
ggcctgatcctgctcaccgccacgcccgagcagctcggccgggccggacatttcgcgcgg
ctgcgcctgctcgatccgcagcgctaccacgacctcgacgcctacctggaggaaaccgcg
cgtttccgcggcctgtcggcgatcgccgatcgtctgcagcagggtctgccgctcaccctg
gcgcaacaggccgaactggaacgcgccttcgccggcgatgcccatctcaccgcgctgctg
gccgagccgggccgccccgcccacgcccgtgaactgctgggtgcgctgatcgaccgccac
ggcaccggacgggtgatgttccgcaatcgccgcgccggcgtcggcggttttccgcgccgg
cgcccggtatgggaggcggtcgcgcgggcagcggacgaggcgcgccggcaggcctggctg
gccgagttccatgccgacatccagcccaggccgccggcgctgagcttcgattacggcgac
gatccgcggctggcggcgctgctcgccctgctggaacgccatccgcaggacaagttcctg
ctgatttgccgcagccaggccaaggtgctggcgctggaagaggcgttgcggacccgtacc
ggcatcggcctggcccgcttccatgaaggtttggggctcgtccagcgcgaccgcaacgcg
gcctggttcgcgcaggcggacggcgcgcggctgctgctgtgctcggaaatcggctcggag
ggacgcaacttccagttcgcccatcatctggtgctgtgggacctgccgctcgacccggac
ctgctcgaacagcgcatcggccggctggatcgcatcggccagccgcacgacatcgacatc
cacctgctggtgccgccggacagcgcgcagcacgtgctcgcgcgctggtatgacgagggc
atcgacgcctttcgcgagagtcccgccgacggccgcgagctgctgcgccgtttcggcgcg
ccgctcgccgcgctggccgaggcccatgcccgcggcgatgacgaacgcgaccaggaactc
gaggtgctgatcgccgagacccgggccgcccacacggaactggccgcgatgatccaggaa
ggccgcgaccacctgctggaactggccgccagccgcgatccgcatgccgacgagctcctg
cccgccttgcgcgcggaggacgacgatcccggccgcgacgccttcatccagcggctgatg
gagcatttcggcgtgcacgtggaagaacttgacgcgcacaccctcgtgctcgatccgcaa
tacctgtccaccgacgccctgcccggcctcggcgaaggcccgcaggcggcgactttcgac
cgcgccaccgcgctgatccgcgaggacctgccgctgctccggctcgatcacccgctggtg
cagggtgccatggatttggtgctctccggcgaacagggcaatgccgccttcatgatcgac
gacgccctgccgccgcgcagcgcgctgctgcaggcggtattcgtgctcgaatgcgtggcc
gatcgccggctcgacgccgagcgcttcctgccggcccaggcgctcgaaatcaccgtggac
agccggctcaccgagcggccgggcttcgcgcctagcgaagcggcggtgcgcaaggccgcc
gatcgcgccatcgacgtgccgcgctatcgcaagatgctcgcccggctggtgccgccgatg
ctggaacgggctgaggcgatcgcgcgcgaacgcgcgcaggcgacgatcgacgccgcccgg
gccgaggtgggcgcccggctggatgccgaactcgcccgcctgcatgccctgcgtgcggtg
aacccggcggtccgtcccgaggagatcgaggccctcgccgccgagcgcgaggccctgctc
gaggccttgcccggcgcgcgcctgcggctggacgcggtgcgcttcatcgccagcgcggac
atcctggccctgcgctga
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