Aerosticca soli: ALSL_1250
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Entry
ALSL_1250 CDS
T06043
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
rbd
Aerosticca soli
Pathway
rbd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ALSL_1250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_1250
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ALSL_1250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BBD79908
UniProt:
A0A2Z6E5W0
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All DBs
Position
complement(1328130..1329050)
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AA seq
306 aa
AA seq
DB search
MARPLWNGILSFGLLNLPVALMPGERRVDLHFRLLDARDRKPIRYERVNTETGDEVPWKD
IVKAFEYSKGNYVVLEEDDLRAAAPESHETVEVERFVDAGAIPPNYFDKPYVLVPARKAE
KGYVLLRETLKKTGKVGIARVVIRTREHLAAVMPQGDALLLMLLRYPQEVIDPAEYPLPT
GKPEDYRVSARELDMAAQLVASMSGPWQPESYQDEFRDRLRAVIEKKMKASGAKTALAEE
TPPTPEHASTNVVDFVSLLKRSLAEKGPVAPAKRAAKSAAKAPAKRAARSPTKATPGRRA
GSRSKR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccctctgtggaacggcattctctccttcggcctgctcaacctgccggtcgcg
ctcatgccgggcgagcgccgggtcgacctgcatttccgtctgctcgacgcccgcgaccgc
aagccgatccgctacgagcgggtcaacaccgagaccggcgacgaggtgccctggaaggac
atcgtcaaggcgttcgaatacagcaagggcaactacgtggtgctggaagaggacgacctg
cgcgccgccgccccggaaagccacgagaccgtggaagtggagcgcttcgtcgatgccggc
gccatcccgcccaactatttcgacaagccctacgtgctggtgccggcccggaaggccgaa
aaaggctacgtgctgctgcgcgagacgctgaagaagaccggcaaggtcggcatcgcacgg
gtggtgatccgcacccgcgagcatttagccgcggtgatgccgcagggcgacgcgttgctg
ctgatgctgctgcgctatccgcaggaggtgatcgatccggccgaatacccgctgcccacc
ggcaagccggaagactaccgagtgagcgcacgcgagctggacatggcggcccagctggtc
gcctcgatgagcggtccctggcagccggagtcctaccaggacgagttccgtgaccgcctg
cgcgccgtgatcgagaagaagatgaaggcgagcggcgccaagaccgcgctggccgaggaa
acgccgcccacgcccgagcacgccagcaccaacgtggtcgacttcgtctcgctgctcaag
cgcagcctcgccgagaagggaccggtcgcgccggccaagcgcgccgccaagagcgcggcc
aaggcgcccgccaagcgagccgcgcgcagcccgaccaaagccactccgggccggcgggcc
ggctcgcggagcaagcgatga
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