Aerosticca soli: ALSL_1336
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Entry
ALSL_1336 CDS
T06043
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rbd
Aerosticca soli
Pathway
rbd03410
Base excision repair
rbd03430
Mismatch repair
rbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ALSL_1336
03430 Mismatch repair
ALSL_1336
03440 Homologous recombination
ALSL_1336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_1336
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ALSL_1336
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ALSL_1336
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ALSL_1336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
BBD79993
UniProt:
A0A2Z6E4P6
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All DBs
Position
1413684..1415471
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AA seq
595 aa
AA seq
DB search
MAPAACLAGPAMSLQWRRRPLLGTPVGWSDAVHPVLRNVYAARGVLTPADAEHRLQRLLR
PDGLGGLEAAVALLAEAIRTDAAIVVAGDYDCDGATGTALAVRGLRMLGARRVDYAIPNR
FLHGYGLSAALVDTLQPAPQLIVTVDNGVASVEGVAAARARGIRVIVTDHHLPGERLPAA
DAIVNPNLPGDGFPSKHLAGVGVMFYLLLALRAQLFPQGESAGRAARETDPADRTPPGGR
PDLSALLDLVALGTVADLVPLDFNNRVLVEAGLRRIRAGRACPGIGALLELSRREPALLS
AADLGFAVAPRINAAGRLQDMRLGVACLLAEDAATARRHAERLDAINQERRALQASMVEE
ARVRVSADDLAGDAVGVALYERSWHAGVVGLVASQLKERLHRPVIAFAPVDGGETSELRG
SGRSIAGFHLRDALALIDARQPGLIVRFGGHAMAAGLTLRREDFPRFAHAFDAVARERLP
EEALHAVLHTDGELPPGAFGVDLARQLQAGGPWGQGFPEPLFDNVFDCRRWRLLGDRHWQ
LELHDPRDGVRYDAVLFNPQEAEPPPRLRAAYELVLDTWQGRERLRLRLRHIAPA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccggctgcgtgtctggcgggaccggcgatgagcctgcagtggcgtcgacggccg
ttgctcggcacgcccgtcggctggagcgatgccgtgcatccggtcctgcgcaatgtctat
gccgcccgcggcgtcttgacgccggccgacgccgaacaccggctgcagcggctgttgcgt
ccggacgggctcggcgggctcgaggccgcggtcgcgctgctggccgaagccatccgcacc
gacgcggcgatcgtcgtcgccggcgactatgactgcgacggcgccaccggcacggcgctc
gccgtgcgcggcctgcgcatgctcggcgcgcggcgcgtggattacgccattcccaaccgc
ttcctccacggctacggtctgagcgccgcgctggtcgacaccctgcagccggcgccgcag
ctgatcgtcaccgtggacaacggcgtggccagcgtggagggcgtggccgcggcccgggcg
cgcggcatccgcgtgatcgtcaccgaccatcacctgcccggcgaacggttgccggcggcc
gacgccatcgtcaatcccaatctgccgggcgacggtttcccgagcaagcacctggccggc
gtcggggtgatgttctatctgctcctcgccctgcgtgcgcagctgtttccgcaaggggaa
tccgccggtcgcgctgcgcgggagacggaccctgccgaccgcacgccgccgggaggtcgc
cccgatctttccgcgctgctcgatctggtcgcgctcggcaccgtggctgatctcgtgccg
ctcgacttcaacaatcgcgtgctggtcgaggccggtctgcggcgtatccgtgccggccgg
gcctgtccgggcatcggtgccctgctcgagctttcgcggcgcgagccggccctgctgagc
gcggccgatctcggctttgcggtcgccccgcgcatcaatgccgccggccgcctgcaggac
atgcgcctgggcgtggcctgcctgctcgccgaggatgccgccaccgcccgtcggcatgcc
gaacgcctggatgccatcaaccaggagcgccgcgcgctgcaggcatcgatggtcgaggag
gcgcgggtgcgagtgagcgccgatgacctcgcgggcgatgcggtcggcgtggcgctgtac
gaacgcagctggcatgccggcgtggtgggtctggtggcctcgcagctcaaggagcggctg
catcggccggtgatcgccttcgcgccggtggacggcggcgaaacgagcgaactgcgcggc
tctgggcgttccatcgccggttttcatctgcgcgatgcgctggcgctcatcgacgcccgg
caacccgggctcatcgtccgcttcggcggtcacgcgatggccgccggcctcacgctgcgg
cgcgaggatttcccccgtttcgcccatgccttcgacgcggtggcacgcgagcgcctgccg
gaggaggccttgcacgcggtgctgcacaccgacggcgagctgccgcccggcgcctttggc
gtggacctcgcgcgccagctccaggccggcgggccgtgggggcagggctttcccgagccg
ttgttcgacaacgtcttcgactgccggcgctggcggctgctgggcgacagacactggcaa
ctggagctgcacgatccccgcgacggcgtccgctacgacgcggtactgttcaacccgcag
gaggcggaaccgccgccgcgcctgcgggccgcctacgaactcgtgctcgacacctggcag
ggacgcgagcggctgcgcctgcggttgcggcacatcgcgccggcttga
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