Aerosticca soli: ALSL_1475
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Entry
ALSL_1475 CDS
T06043
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rbd
Aerosticca soli
Pathway
rbd03030
DNA replication
rbd03430
Mismatch repair
rbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ALSL_1475
03430 Mismatch repair
ALSL_1475
03440 Homologous recombination
ALSL_1475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbd03032
]
ALSL_1475
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_1475
Enzymes [BR:
rbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ALSL_1475
DNA replication proteins [BR:
rbd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ALSL_1475
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ALSL_1475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF4129
HROB
Motif
Other DBs
NCBI-ProteinID:
BBD80132
UniProt:
A0A2Z6E5E6
LinkDB
All DBs
Position
1556794..1560366
Genome browser
AA seq
1190 aa
AA seq
DB search
MSARFVHLHLHSEYSLVDSTIRLKALIEACARMGLPAAALTDDSNLFGLVKFYKACSAAG
IKPIGGCDLWIAGGEARPWRMTVLCQHHGGYLNLSRLISKAWREGQKGGRALVDPQGFEA
DGGAGLIALLGRESAIAQLAANQGLEAAQAALEVWRRRFPDRLYLELTRCGRDGEEAWND
AALALAAALDLPVVASNDVRFLAREDFEAHEARVCIHQGRVLADPKRPREYSAEQYLKSP
EEMAALFADLPEALENSVELAKRCTLELSFGTYHLPVFPVPEGHDLASYIRESARTGLAE
RLAQAPPAPGRTPEDYAARLERELDVIVEMGFPGYFLIVSDFIRWAKDHGIPVGPGRGSG
AGSLVAWALKITDLDPLRFDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVAHKYGRD
HVSQIITYGSMAAKAVLRDCGRVLGMSYGQVDRIAKLIPSRPLDLTLSDALGRSEKSKKE
PERVVREFCDLYERDEDDARSLIELALKLENLTRNAGKHAGGVVIAPRPLTEFAPLYCEP
GGTGVVTQYDKDDVEAVGLVKFDFLGLRTLTIIDWTVKAINAQRAQTGEPPLDIAALPLD
DPLPYALLKKAQTVAVFQLESPGMQRMLKDAQPDRFEDIIALVALYRPGPMDLIPSFVAR
KHGREPVAYPDPRVEPILAETYGIMVYQEQVMQMAQIVGGYTLGGADLLRRAMGKKKPEE
MVKHRAIFREGAARNGLPAARADQIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKAHYP
AEFMAATISSDMDNTDKVVTFLKEAKALGLTVLPPDVNASTHHFVAVPPAPAEGGPARVI
RYGLGAIKGVGQGACEAIVAERGRHGPYRDLVDFCRRVDPAKLNRRVLEALILAGAMDAL
APTRASLMLQLPDAIKAAEQQLRDREAGQNDIFGALGGDATPLAHVELPTAPEWPLEQKL
QGERDTLGHYLSGHPTDPWREELAQLATCPLGEITTRYQPPRPRKAEGEDNRFRRGPETP
WTVAGLVVAVRKRGESDAFVRLEDATGSIEVSFYGELYLQAAPLLVRDELLVVEGGLRID
EFSGGGFQLRARSVMTLADACRRHARALMVKLDGVGGGFAEQLKATLAGYRGGAATVTLH
GYHNRLARADLELGEDWRIDAVPELLRAVRALPGVEAARLRLVKPEPRAG
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccgcttcgtccacctgcacctgcacagcgaatactcgctggtcgattcgacc
atccgcctcaaggccctgatcgaggcctgcgcgcgcatgggcctgccggcggcggcgctc
accgacgacagcaacctgttcggcctggtcaagttctacaaggcctgcagcgcggccggc
atcaagccgatcggcggctgcgacctgtggatcgccggcggcgaggcgcggccctggcgg
atgaccgtgctgtgccagcaccacggcggctatctcaacctgtcgcggctgatctcgaag
gcctggcgcgagggccagaaaggcggccgcgcgctggtcgacccgcagggcttcgaggcc
gatggaggcgccggcctgatcgccctcctggggcgcgagagcgcgatcgcgcaactggcc
gcgaaccagggcctggaagccgcgcaggccgcgctcgaggtgtggcggcggcgttttccc
gaccggctgtacctggaactgacccgctgcggacgcgacggcgaggaggcgtggaacgat
gccgcgctcgcgctcgccgccgcgctcgacctgccggtggtcgccagcaacgacgtgcgt
tttctcgcccgcgaggatttcgaggcccacgaggcccgcgtgtgcatccaccagggccgc
gtgctggccgatcccaagcgcccgcgcgaatacagcgccgagcagtacctgaaatcgccc
gaagagatggccgcgctgttcgccgacctccccgaggcgctggaaaacagcgtggagctc
gccaagcgctgcacgctggaactgtccttcggcacctatcacctgcccgtgtttccggtg
ccggaagggcacgacctggccagctacatccgcgagagcgcgcgcacgggtctggctgag
cggctcgcgcaggcgccgcccgcgcccggacgcacgccggaggactacgccgcccgcctg
gagcgcgagctcgacgtcattgtcgagatgggctttcccggctacttcctgatcgtttcg
gacttcatccgctgggccaaggatcacggcatcccggtcggtccggggcgcggttcgggc
gccggctcgctggtcgcctgggcgctcaagatcaccgacctcgatccgctgcgcttcgac
ctgctgttcgagcgcttcctcaaccccgagcgcgtgtcgatgccggacttcgacatcgat
ttctgcatggatcgccgcgacgaggtgatcgactacgtggcgcacaaatacggccgcgac
cacgtcagccagatcatcacctacggctcgatggcggccaaggcggtgctgcgcgactgc
gggcgcgtgctcggcatgagctacggccaggtcgaccgcatcgccaagctgattccctcg
cgtccgctcgacctcaccctttccgacgcgctcggccgcagcgagaagtcgaagaaggaa
cccgagcgggtggtgcgcgagttctgcgatctctacgagcgcgacgaggacgacgcgcgc
tcgctgatcgagcttgcgctcaagctggaaaacctgacccgcaacgccggcaagcatgcc
ggcggcgtggtgatcgcgccgcgcccgctgaccgagttcgcgccgctgtattgcgagccg
ggcggcaccggcgtggtcacccagtacgacaaggacgacgtcgaggcggtcggcctggtg
aagttcgacttcctgggcctgcgcacgctcaccatcatcgactggacggtgaaggcgatc
aacgcgcagcgggcacagaccggcgagccgccgctggatatcgccgcgctgccgctggac
gacccgctgccctatgcgctgctgaagaaggcgcagacggtcgcggtgttccagctcgaa
tcgccgggcatgcagcgcatgctcaaggacgcccagcccgatcgtttcgaggacatcatc
gcgctggtcgcgctgtaccggcccgggccgatggacctcatcccgagcttcgtcgcgcgc
aagcacggccgcgagccggtggcctaccccgacccgcgcgtggagccgatcctggccgag
acctacggcatcatggtctaccaggaacaggtgatgcagatggcgcagatcgtcggcggc
tacacgctgggcggcgccgacctgctgcgccgcgcgatgggcaagaagaagcccgaggag
atggtcaagcaccgcgcgatcttccgcgagggcgcggccaggaacggcctgccggcggcc
agggccgaccagatcttcgacctgatggagaagttcgccggctacggcttcaacaagtcg
cacgccgccgcctatgcgctggtgtcctaccagaccgcctggctgaaggcgcattacccg
gccgagttcatggcggcgaccatctcctcggacatggacaacaccgacaaggtggtgacc
ttcctgaaggaggccaaggcgctcggcctcaccgtgctgccgccggacgtcaatgcctcc
acccaccatttcgtggcggtgccacccgcgccggcggagggcggccccgcgcgggtgatc
cgctatggcctgggcgcgatcaagggcgtgggccagggcgcctgcgaggcgatcgtcgcc
gaacgcgggcgtcacggtccctaccgcgacctcgtcgacttctgccgccgggtcgatccg
gccaagctcaaccgtcgcgtgctggaggcgctgatcctcgccggcgcgatggacgcgctg
gctcccacccgcgccagcctgatgctgcaactgcccgacgcgatcaaggccgccgaacag
caactacgcgaccgcgaggccggccagaacgacatcttcggtgcgctcggcggcgatgcc
acgccgctcgctcacgtcgaattgcccaccgcgcccgaatggccgctggagcagaaactg
caaggcgagcgcgacacgctcggccactatctttccggccatcccaccgatccctggcgc
gaagagctggcgcagctggccacctgcccgctcggcgagatcacgacgcgctaccagccg
ccgcgaccacgcaaagccgagggcgaggacaaccgcttccgccgcggcccggagacgccc
tggaccgtcgccggcctggtcgtggccgtgcgcaaacgtggcgaaagcgacgccttcgtg
cgcctggaggacgccaccggcagcatcgaggtgagcttctacggtgagctctatctgcag
gccgcgccgctgttggtgcgcgacgagctgctggtggtggaaggcggcctgcgcatcgac
gaattctccggcggcggcttccagctgcgcgcgcgcagcgtgatgaccctggccgatgcc
tgccgccgccatgcgcgcgccctcatggtcaagctcgacggcgtgggcggcggcttcgcc
gagcagctcaaggcgaccctggccggctatcgcggcggcgcggccacggtgaccctgcac
ggctaccacaaccgcctggcccgcgccgacctggaactcggcgaagactggcgcatcgat
gccgtgcccgaactcctgcgtgcggtacgcgccctgcccggggtcgaggccgccagactg
cgtctggtcaagcccgaaccacgcgccggttga
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