Aerosticca soli: ALSL_1824
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Entry
ALSL_1824 CDS
T06043
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
rbd
Aerosticca soli
Pathway
rbd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ALSL_1824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_1824
Enzymes [BR:
rbd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
ALSL_1824
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ALSL_1824
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALSL_1824
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ALSL_1824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
GAGA
Motif
Other DBs
NCBI-ProteinID:
BBD80471
UniProt:
A0A2Z6E6Z6
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All DBs
Position
1951537..1952988
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AA seq
483 aa
AA seq
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MQTFFWHDYETFGADPRRDRPAQFAGIRTTPELDIVEAPVMFYARPPRELAPSPDACLVT
GIDPFAADREGLGEAEFAARVHEQLARPGTCAVGYNSLRFDDEFTRHLLYRNFYDPYARE
WEHGNSRWDLIDLARMCQALRPEGIVWPRREDGTPSFRLEHLAAANALGLTRAHDALADV
FALIELARLIRARQPRLWHWHLALRRKTRVFELLDTAAMTPLVHVSSRYPASRHCLALIV
PLALHPSRPAEVIVYDLADDPAAWLDLDEDAIADRVFTARADLPVDVERIRLRTVRANHA
PALAPLSVLKGVDHDRLGIDLARALGHRDTLQRHGETLRAKLRGVFARAAAMAPPEDPEL
ALYAGFLPDADRRLLAEVRGTPPAELGRRAFPFRDPRYPELLFRYRARNWPQTLDPAERE
RWEAFRRARLTRPTPLTTLTLDDYFARLAELRRDPAAAHRLALLDRLQAWGEQLAIESLP
LGA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccttcttttggcacgactacgagactttcggcgccgatccgcgccgcgaccgc
ccggcgcaattcgccggcatccgcaccacgccggagctcgacatcgtcgaggcgccggtg
atgttttacgccaggccgccgcgcgagctcgccccttcgcccgacgcctgcctcgtcacc
ggcatcgatccgttcgccgccgaccgcgaggggctcggcgaggccgagttcgccgcccgc
gtgcatgagcagctcgcccggcccggcacctgcgcggtcggctacaactcgctgcgcttc
gatgacgaattcacccgccacctgctgtaccgcaacttctacgacccgtatgcgcgcgag
tgggagcacggcaactcgcgctgggacctgatcgacctggcccgcatgtgccaggcgctg
cggcccgagggcatcgtgtggccgcgccgcgaggacggcacgccgagcttcaggctggaa
cacctggccgccgccaacgcgctcgggctgacccgcgcccacgatgcgctcgccgacgtg
ttcgcactgatcgaactcgcccggctgatccgcgcccgccagccgcggctgtggcactgg
cacctcgccctgcgccgcaagacgcgcgtgttcgagctgctcgacaccgccgcgatgacg
ccgctggtgcacgtctcctcgcgctatccggccagccggcactgtctggcgttgatcgtg
ccgctcgccctgcatccatcgcgcccggccgaggtgatcgtctacgacctcgccgatgat
ccggccgcctggctcgatctcgacgaggacgccatcgccgaccgcgtattcaccgcccgc
gccgacctgcccgtggatgtcgaacgcatccggctgcgcaccgtgcgcgccaatcacgcg
cccgcgctggcgccgctgtccgtgctcaagggcgtcgaccacgaccggctgggcatcgac
cttgcgcgtgcgctcggtcatcgcgacaccctgcagcgccatggcgagacactgcgggcg
aagctgcgcggcgtgttcgcccgtgccgcagcaatggcgccgcccgaggacccggaactg
gcgctgtatgccggtttcctgcccgatgccgaccggcgcctgctcgccgaagtgcgcggc
acgccgccggccgagctcggtcggcgcgcgttcccgttccgcgatccgcgctatccggaa
ctgctgttccgctaccgcgcacgcaactggccgcagacgctggatccggccgagcgggaa
cgctgggaagcgttccgccgcgcgcggctcacccgcccgacgccgctcaccacgctcacc
ctcgatgactacttcgcgcgcctggccgaactcaggcgcgatcccgccgcggcgcaccgg
ctcgccttgctcgaccggctgcaggcctggggcgagcagctcgcgatcgaaagccttccg
ctcggcgcctga
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