Aerosticca soli: ALSL_1938
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Entry
ALSL_1938 CDS
T06043
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rbd
Aerosticca soli
Pathway
rbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ALSL_1938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbd03019
]
ALSL_1938
Enzymes [BR:
rbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ALSL_1938
Messenger RNA biogenesis [BR:
rbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ALSL_1938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF3775
Motif
Other DBs
NCBI-ProteinID:
BBD80583
UniProt:
A0A2Z6E680
LinkDB
All DBs
Position
2069403..2070764
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AA seq
453 aa
AA seq
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MNSQADTGAAAPLRIIPRAEHAISRKNISKAALRVLYRLHEAGYAAFLVGGAVRDLLLGG
HPKDFDVATDATPEEVKKLFRNCRLIGRRFRLAHVVYGDEIVEVATFRGAGVSEEGAADA
AGRHIVDGRIVRDNVWGSIEEDALRRDFRVNAMYYDISDFSVRDYVGGMQDIENRVLHLI
GDPATRYREDPVRMLRAVRLAAKLDFRIDEKAAAPLAELGPLLAEVAPARLFDESLKMFL
SGHGLASFRLLERTGLLRFLFPPVARALERGDATLRAFIEQGLANTDARVAADKSVTPAF
LFAVLLWGEVRDLAHAWMGRGLESAEAWSRAAAHVVAEQCRRVAIPRRFTLTMEEIWLLQ
PRFEQLQRKKVFRLLAHPRFRAAFDFLLLRGVESPALRELGQWWEHAQQLPHEVLAAALP
ASAGTAAEAKPEVAAPAPKRRRRRRTSGRAGTA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgaattcgcaagccgataccggggccgccgcccctttgcgcatcattccgcgtgccgaa
cacgccatttcgcgcaagaacatcagcaaggccgccctgcgcgtgctctatcgtctgcat
gaggccggttatgcggccttcctggtcggcggtgcggtgcgcgacctgttgctcggcggc
caccccaaggatttcgacgtcgccaccgacgcgaccccggaggaggtgaagaaactcttc
cgcaactgccgcctgatcggccgccgcttccggctcgcgcacgtggtctatggcgatgag
atcgtcgaggtggccaccttccgcggcgccggcgtcagcgaggaaggcgcggccgatgcc
gcggggcgccacatcgtcgacggccgcatcgtgcgcgacaacgtctggggcagcatcgag
gaggacgcgctgcggcgggacttccgcgtcaacgcgatgtattacgacatcagcgacttc
tccgtccgcgactacgtgggcggcatgcaggacatcgagaatcgcgtgctgcacctgatc
ggcgatccggccacgcgctaccgcgaggacccggtgcgcatgctgcgcgccgtgcggctg
gcagccaagctcgacttccgcatcgacgagaaggccgccgcgccattggccgaactcggc
ccgctgctcgccgaggtggcgccggcgcggctgttcgacgagtcgctcaagatgttcctg
tccgggcatggcctggcgagcttccgcctgctggaacgcaccggcctgctgcgctttctg
tttccgcccgtggcgcgcgcgctggaacgcggcgacgccacgctgcgcgccttcatcgag
cagggactggccaataccgacgcccgcgtggccgccgacaagtcggtgacgccggcgttc
ctgttcgcggtgctgctgtggggcgaggtgcgcgacctcgcccacgcctggatgggccgc
ggcctcgaatccgccgaggcctggagccgcgccgccgcgcacgtggtcgccgaacaatgc
cgacgcgtggccatcccgcgccgtttcaccctgaccatggaagagatctggctgctgcaa
ccgcgtttcgagcagctccagcgcaagaaggtgttccgcctgctcgcccacccgcgtttt
cgcgccgcgttcgatttcctgctgctgcgtggcgtggagtcgccggccctgcgcgagctc
ggtcaatggtgggagcacgcccagcaactgccgcacgaggtgttggcggccgcgctgccg
gcttccgcgggcaccgcggccgaagcgaagcccgaagtcgccgcaccggcgcccaaacgg
cggcggcgacggcgcacgagtgggcgcgccggcaccgcatga
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