Aerosticca soli: ALSL_2042
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Entry
ALSL_2042 CDS
T06043
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rbd
Aerosticca soli
Pathway
rbd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ALSL_2042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbd03021
]
ALSL_2042
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_2042
Enzymes [BR:
rbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ALSL_2042
Transcription machinery [BR:
rbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ALSL_2042
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ALSL_2042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl
BSH_YknX
RnfC_N
BSH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
BBD80677
UniProt:
A0A2Z6E6M2
LinkDB
All DBs
Position
complement(2152613..2156821)
Genome browser
AA seq
1402 aa
AA seq
DB search
MKDLLNLFNQQRTTPEFDSIRIALASPELIRSWSYGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAFVVIDPGLTPLERGQLLSEDQYLEAVEEHGDEFDARM
GAEAVYELLKSLDLQGELVRLKEEIASTNSETKLKRLTKRAKLIEAFVESGNKPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFAKLQARGDAPTIKAAKKLVEREEPMVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEA
RALMMATNNILSPANGEPIIVPTQDVVLGLYYMTRELVNARGTGMAFSSVSEVRRAYDNR
VVDLHARIKVRMPRREASGHAEQPVTTLVETTVGRALLLEIMPEGLPFELANTELTKKAI
SRLINACYRRLGLKDTVIFADQLMYTGFRFATRAGISIGIDDMVIPAEKKAIIEEAEKEV
VEIQEQYQSGLVTAGERYNKVVDIWSRTNELVAKAMIDGIGTEKVVDANGKTVVQKSMNS
LFIMADSGARGSVAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGARK
GLADTALKTANSGYLTRRLVDVAQDVVITSTDCGTEAGLTMQPIVEGGDVVEPLRERVLG
RVAAEDVYAPGNDDEPIVTRNTLLDEVLVERLDQAGVQAIKVRSPITCEAHHGVCALCYG
RDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVKTTGTLKF
NNLKTVQHAQGHLVAVSRSGEVSVIDAHGRERERYKVPYGATITVKDGEPVKAGQTIANW
DPHTHPIVSEVAGTVRFIDFIDGVTVQSQTDELTGLESAVVTDPKRRGTAAKDLRPIVRL
EDEKGRELKLPGTDVPAQYFLPAGAIVSIQSGAKVGVGDVVARIPQETSKTRDITGGLPR
VADLFEARKPKEPAILAERSGVVSFGKDTKGKQRLIIKDVDGNEHEELIPKWRQVIVFEG
EHVEKGETVVDGEPNPHDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEAIIRQML
RKVEITDPGDSNYLRGEQVERVRINEENERAIARGERPAEYQSVLLGITKASLATESFIS
AASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHAQRRRQGGLTASEIE
TLSGTSSAVTFAESAAEGGEQE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttgctcaatctcttcaaccagcagcgcaccacgcccgagttcgattcgatc
cgcatcgcgctggcttcgccggagctgatccgctcctggtcgtatggcgaggtcaagaag
ccggagacgatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgcgcggcc
attttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtggtctgcgagaaatgcggcaccgaggtgactctggccaaggtgcgccgcgag
cgcatggggcacatcgagctcgccagcccggtcgcgcacatctggttcttgaagtcgctg
ccctcgcgcatcggcctcatgctcgacatgaccctgcgcgacatcgagcgcatcctctat
ttcgaggccttcgtggtcatcgacccgggtttgaccccgctcgagcgcggccagctgctc
agtgaggatcagtacctggaggcggtggaagaacacggcgacgagttcgacgcgcgcatg
ggcgccgaggccgtctacgagctgctcaagagcctggatctgcagggcgaactggtgcgg
ctcaaggaggagatcgcctcgaccaattcggaaaccaagctcaagcgactgaccaagcgc
gccaagctgatcgaggccttcgtggaatcgggcaacaagcccgagtggatggtgatgacc
gtgctgccggtgctgccgccggacctgcgtccgctggtgccgctcgacggcgggcgtttc
gccacgtccgacctcaacgacctttatcgtcgcgtcatcaaccgcaacaaccgcctgaag
cggctgctcgagctcaacgcgcccgacatcatcgtgcgcaacgagaagcgcatgctgcag
gaggcggtggacgcactgctcgacaacggtcgccgcggccgcgccatcaccggtaccaac
aagcgtgcgctgaagtcgcttgccgacatgatcaagggcaagcaggggcggttccgccag
aacctgctcggcaagcgcgtggattattccggccgttcggtgatcgtggtcggcccgacc
ctgcgtctgcaccagtgcggcctgcccaagaagatggcgctcgagctgttcaagccgttc
atcttcgccaagctgcaggcgcgcggcgacgcgcccaccatcaaggcggccaagaagctc
gtcgagcgtgaggagccgatggtgtgggacatcctcgaggaggtgatccgcgagcatccg
gtgctgctcaaccgtgcgccgaccctgcatcgcctcggcatccaggcgttcgagcccaag
ctgatcgagggcaaggcgatccagctgcatccgctggtctgcaccgccttcaacgccgac
ttcgatggcgaccagatggccgtgcacgtgccgctgtcgatcgaggcgcagctcgaggcg
cgcgcgctgatgatggcgaccaacaacatcctgtcgccggccaacggcgagccgatcatc
gtgccgacccaggacgtggtgctcgggctctactacatgacccgcgaactggtgaacgcc
cgcggtaccggcatggcgttctcgagcgtcagcgaggtgcgtcgcgcctatgacaaccgt
gtggtcgacctgcatgcgcggatcaaggtgcgcatgccccggcgcgaagcctcgggccat
gcggaacagccggttaccacgctggtcgagaccacggtcgggcgcgcgctgctgctcgag
atcatgcccgaaggactgcccttcgagctggccaacaccgagctcaccaagaaggccatc
tcgcggctgatcaacgcctgctaccggcgcctgggcctcaaggacaccgtgatcttcgcc
gaccagctgatgtacaccggcttccgcttcgccacccgcgcaggcatctcgatcggcatc
gacgacatggtcatcccggccgagaagaaggcgatcatcgaagaggccgagaaggaggtc
gtggagatccaggagcagtaccagtcgggcctggtcaccgccggcgaacgctacaacaag
gtggtcgacatctggtcgcgcaccaatgaactggtcgccaaggcgatgatcgacggcatc
ggcaccgagaaggtcgtcgacgccaatggcaagaccgtggtgcagaagtcgatgaattcg
ctgttcatcatggccgactcaggtgcgcgcggctcggtggcgcagatccgccagctcgcc
ggcatgcgcggcctgatggcgcgtccggacggctccatcatcgagacgccgatcaaggcc
aacttccgcgagggcctcaacgtcctgcagtacttcaactccacccacggcgcgcgcaag
ggtctggccgacaccgccctcaagacggccaattcgggttatctgacccggcgtctggtc
gacgtcgcccaggacgtggtgatcacctcgaccgactgcggcaccgaagctggcctcacc
atgcagcccatcgtcgagggcggcgatgtggtcgagccgctgcgcgagcgcgtgctcggc
cgggtggccgccgaggacgtctatgcgccgggcaacgacgatgagcccatcgtcacccgc
aacaccttgctggacgaggtgctggtcgagcgtctcgaccaggccggcgtgcaagcgatc
aaggtgcgttcgccgatcacctgcgaggcgcatcacggcgtttgcgcgctgtgctacgga
cgcgatcttgcccgcggccatctggtcaacatgggcgaggccgtgggcgtggtcgccgcg
cagtcgatcggcgagccgggcacgcagctgaccatgcgcaccttccacatcggcggtgcg
gcgtcgcgtgccgcggccgtggacaacgtgacggtgaaaaccaccggcacgctcaagttc
aacaacctgaagaccgtgcagcatgcccagggccatctggtcgcggtgtcgcgttcgggc
gaggtgtcggtgatcgacgcccacggtcgcgagcgcgagcgctacaaggtgccctacggc
gcgaccatcacggtcaaggatggcgagccggtcaaggccggacagaccatcgccaattgg
gatccgcatacccatccgatcgtctcggaagtggccggcacggtgcgtttcatcgacttc
atcgacggcgtcaccgtgcagagccagaccgacgagttgaccggtctggaatcggcggtg
gtcaccgatcccaagcgccgcggcacggcggccaaggatctgcgtccgatcgtgcggctg
gaggacgagaagggtcgcgagctcaagctgcctggcaccgacgtgccggcgcagtatttc
ctgccggccggtgccatcgtgtcgatccagagcggcgccaaggtcggcgtcggcgacgtg
gtcgcgcgcatcccgcaggaaacctccaagacccgcgacattaccggtggtctgccgcgc
gtggccgacctgttcgaggcgcgcaagcccaaagagccggcgatcctggccgagcgttcc
ggcgtggtcagtttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggacgtc
gacggcaacgagcatgaggagctgatcccgaagtggcgtcaggtcatcgtgttcgagggc
gagcacgtggagaagggcgaaaccgtggtcgacggcgagcccaatccgcacgacatcctg
cgtctcttgggcgtcgagccgctggcagcctatctggtcaaggagatccaggacgtctac
cggctgcagggcgtcaagatcaacgacaagcacatcgaggcgatcattcgccagatgctg
cgcaaggtcgagatcaccgatccgggcgacagcaactacctgcgcggtgaacaggtcgag
cgcgtacgcatcaacgaggaaaacgagcgtgccatcgcccgtggcgagcgtccggcggag
taccagtcggtcctgctcggtatcaccaaggcgtcgctggccaccgagtcgttcatttcg
gcggcctcgttccaggagaccacccgtgtgctgaccgaggcggcggtccgggggacacgg
gacaccttgcgcggcctcaaggaaaacgttattgtcggccgtctcattccggccggcacc
ggcttggcctaccatgcgcagcgtcgccgtcagggcggcctgaccgcatcggagatcgag
accctgtccgggacgtcttccgcggtgaccttcgcggagtccgcagccgaaggcggcgag
caggagtaa
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integrated database retrieval system
