Aerosticca soli: ALSL_2200
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Entry
ALSL_2200 CDS
T06043
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rbd
Aerosticca soli
Pathway
rbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ALSL_2200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_2200
Enzymes [BR:
rbd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ALSL_2200
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALSL_2200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
AAA_16
RecD_N
DEAD
PhoH
SLFN-g3_helicase
nSTAND3
AAA_28
TLP1_add_C
MeaB
NPHP3_N
Terminase_6N
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BBD80826
UniProt:
A0A2Z6E6N5
LinkDB
All DBs
Position
complement(2334210..2335988)
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AA seq
592 aa
AA seq
DB search
MSAFGFDHGPELPAEAAWRPLDRALWRWTRAHGGSPLLARLAAWAAFADGEGDAALPLAG
EEALRYGLAPLDDARLDTLRGEPLLGDGRVPTPFVLDAAGRFYLWRNHADECALAALLGE
RLAASAAVAVDEADLDALFPGGDPAAVASQREAVRRVGASRLFVLTGGPGTGKTTTVLRM
LLMHLKAMPDARIAVAAPTGKAAQRLVQSLRAGRQALLESTNASLPETWRALLDRLPDGE
ALTLHRLLGYDPHRNRYTRDRAHPLAADLVVVDEASMVDLPTLRALLEALRPEATLILVG
DADQLAPVGIGSVLLDLVVALEARTSPVLVRLTHSFRAERPLAAINDAVRKGEAAALRAA
FAAAGDQAQWRDVTAGAAYRQALQGWAEVLAATLPRPRLPAADDTAAAAQALAALRALSR
RQLLCALREGPHGAPAVDAWLGRRLKEAWGVPEDREWYPGRAVLVVRNDYAARLFNGDVG
LCLADADGRLRVWFESSDADGRPTARAFAPAALPAHEGAFALTVHKAQGSEYAHVAVLLP
PDPAQRILSRQLLYTGLSRAKAQVELWAGEAVVAAALARPLYRIGGLRERLA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattcggcttcgatcatgggcccgagctgccggccgaagcggcctggcggccg
ctcgatcgcgccttgtggcgctggacgcgtgcgcatggcggctcgcctttgctggcgcgg
ctcgccgcctgggccgcgttcgccgatggcgagggcgatgcggcgctgccgctcgccggc
gaggaggcgctgcgttatggcctcgcaccgttggatgacgcacggctcgatacgctgcgc
ggcgagccgttgctcggcgacggccgcgtgccgacaccgttcgtgctcgacgcggccgga
cggttctatctgtggcgcaaccatgccgacgagtgcgcgctcgccgcgctgctgggcgag
cggctggccgcctctgccgcggttgcggtggacgaggccgacctcgacgcgctgtttccc
ggcggcgatccggcggccgtggccagccagcgcgaggcggtgcgtcgcgtcggcgcgagc
cggctgttcgtgctcaccggcggtcccggcaccggcaagaccaccaccgtgctgcgcatg
ctgctgatgcatctcaaggccatgccggacgcgcgcatcgccgtggccgcgccgaccggc
aaggcggcgcagcggctggtgcagtcgctgcgcgcgggccggcaggcgttgctggaaagc
accaacgcatcgctgccggagacctggcgcgcgctgctcgatcgcctgcccgacggcgag
gcgctcaccctgcatcgactgctcggctacgacccgcaccgcaaccgctacacacgcgac
cgtgcgcatccgctcgccgccgacctcgtcgtggtcgacgaggcctcgatggtcgacctg
ccgaccctgcgcgccttgctcgaagccctgcgcccggaggcgacgctgatcctggtcggc
gatgccgatcagctcgcgccggtcggcatcggcagcgtgctgctggacctcgtcgtcgcg
ctggaggcgcggacctcgccggtgctggtgcggctgacccacagcttccgcgccgagcgt
ccgctggccgccatcaacgatgccgtgcgcaagggcgaggcggcggcgttgcgcgcggcc
ttcgccgccgccggcgatcaggcccaatggcgcgacgtgaccgcgggcgcggcctatcgc
caggccttgcagggctgggccgaggtgctcgccgccacgctgccgcgaccgaggctgccg
gccgccgacgacaccgcggcggcggcgcaggcgctcgccgcgttgcgtgcgctgtcgcgc
cggcagctgctgtgcgcgttgcgcgaggggccgcatggtgcgccggcggtcgatgcctgg
ctcggccgcaggctcaaggaagcctggggcgtgccggaggatcgcgagtggtatcccggc
cgcgcggtgctcgtcgtgcgcaacgactacgccgcgcgcctgttcaacggcgacgtcggc
ctgtgtctggccgatgcggacggccgcctgcgggtatggttcgagagcagcgatgccgac
ggccggcccacggcgcgcgcctttgcgcccgccgcgttgccggcgcacgagggcgccttc
gcgctcaccgtgcacaaggcgcagggctccgaatacgcacacgtcgccgtgctgctgccg
cccgatccggcgcagcgcatcctgtcgcggcagctgctctacaccggcctctcgcgcgcg
aaggcgcaggtggaactctgggccggcgaggccgtggtcgccgcggcgctggcgcggccg
ctgtaccgcatcggcgggctgcgcgaacggctggcgtga
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