Aerosticca soli: ALSL_2201
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Entry
ALSL_2201 CDS
T06043
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rbd
Aerosticca soli
Pathway
rbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ALSL_2201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_2201
Enzymes [BR:
rbd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ALSL_2201
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ALSL_2201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_25
DUF6023
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBD80827
UniProt:
A0A2Z6E734
LinkDB
All DBs
Position
complement(2335985..2339524)
Genome browser
AA seq
1179 aa
AA seq
DB search
MTDPAVVAGWTALPLTHAEGAGGRCLIEASAGTGKTWTIAVLYLRLLLEQGLTPRQLVVT
TFTDAAAQELRERIRARLRWAVRQARRFEAGFRVGDGAPEDLRWLQRRWQDETAPAASDA
LRLKLAEAELDLAPVGTLHALCRRVLDAHPLESGGALGGGAMVATAALDAELVTDQWREL
AQSPDELDAGDRAWWKGGRKKFTDALKAAIEPGVRVQVIGEAAIDALMRPEQAARIRAWI
GDGAQFKASNSRLKKALLTLADYIEAGDRSRALPKKVCEDLSAPLETQLKPALVAAAEDD
PLLAFARKTAALLTDPELPARSAALERYRKRLLARREARLRERDEIGFDSLIDRVREALA
PGNALADALFRAWPVALVDEFQDTDARQYAILDAIYRDAHGARRGRLVMIGDPKQAIYRF
RGGDIHTYLQAARSADCRLRLAVNYRSTGKLIAGLNAFHAAAGKALSQFTQDIVYEPMRA
GADIAPLTVDGRPLGRPLVLHFRAEPPANKDDRVDAALEACANHIVALLAGTHRIGEVPL
QPGDLAVLLPQNTHIAQLRRKLQQRGVPCAGAGRSNVFATEIARELQLVLYAVEHREEGV
MRAALTTRLLGVPLDCLRALEQTPARWLAEVQRFTEWQRQWRQEGVLALVQSLLAAAAPR
FLAGVEGERDLTDLRHLGELLQQRERERPGSAQLIDWLAAQRDEDAAEDEERQQRIESDT
RRVQLMTLHKSKGLEFPVVLLPLMWAHEGRDIKLPLRSCAEGERELVLGGPDHAEACAQA
AREDQDERFRILYVALTRARLACHVYALPPTRCADGKTKAPLVDPHRSALDAMLDRAWRN
GEAVLDRLDGVDFRRDDWPWPRLCHAPERGDAASALRALPLPPARPMRQLWSFSALAHVQ
GTALEEPPAADELGLPAVAADIDALPAAAVAAPHPELLALSPWRGAAFGNALHAIFERRV
PGLSMAEQSALIRRCLLEEGVREGDEAEALVARIAARTEATLAAEILPGCTLAALPPRAQ
RAEMAFHYLLDDVSLAAVRRACAEHGEPALVPRGAAGTLRGLMSGKIDLVFEHAGRFHVL
DYKSNWLGDTLDAYRPEQLGAAMDAHHYRFQALLYTLALDRYLRRRVPRYARSQRLGDAV
YLFVRAAGLAPRAGLWRQRFDEALLDAVDRALGAPAEAA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctgccgtggtcgccggctggaccgcgttgccgctgacccacgcggagggc
gcgggcgggcgctgcctgatcgaagccagcgccggcaccggcaagacctggaccatcgcc
gtgctgtacctgcgcctgctgctggagcagggcctcacgccgcgccagctggtggtcacc
accttcaccgacgccgccgcgcaggaactgcgcgaacgcatccgcgcaaggctgcgctgg
gccgtgcgccaggcgcggcgcttcgaggccggcttccgcgtcggggacggcgcgccggag
gacctgcgctggctgcagcggcgctggcaggacgagacggcgcccgcggccagcgatgcg
ctgcgcctgaagctggccgaggccgagctcgatctcgccccggtcggcacgctgcacgcg
ctgtgccggcgcgtgctcgatgcccatccgctggaaagcggcggcgcactcggcggcggt
gcgatggtggcgaccgcggcgctggatgccgagctcgtcaccgaccagtggcgcgagctg
gcgcagtcgccggacgagctcgacgccggcgaccgggcctggtggaagggcggccgcaaa
aagttcaccgatgcgctgaaggcggcgatcgagcccggcgtgcgcgtgcaggtgatcggg
gaggcagccatcgatgcgctgatgcggcccgagcaggcggcgcggatccgcgcatggatc
ggcgatggcgcgcagttcaaggcgagtaacagccggttgaaaaaagccttgttgacgctg
gccgactacatcgaggccggcgaccgcagccgcgcgctgcccaaaaaggtgtgcgaggac
ctgtcggcaccgctggaaacccagctcaagccggccctggtcgcggccgccgaagacgat
ccgctgctcgccttcgcgcgcaagaccgccgccttgctcaccgacccggagctgccggcg
cgcagcgcggcgctggaacgctaccgcaagcgactgctcgcccgccgcgaggcgcgcctg
cgcgagcgcgacgagatcggtttcgacagcctgatcgaccgcgtgcgcgaggcgctcgcg
ccgggcaacgcgctcgccgatgcgctctttcgcgcctggccggtggcgctggtggacgag
ttccaggacaccgacgcgcgccagtacgcgatcctcgatgccatctaccgcgacgcgcac
ggcgcccggcgcggccggctggtgatgatcggcgatcccaagcaggccatctaccgtttc
cgcggcggcgacatccacacctatctgcaagccgcgcgcagcgccgactgccggctgcgg
ttggcggtcaactaccgttccaccggcaagctcatcgccgggctcaatgccttccacgcc
gccgccggaaaggcgctctcgcaattcacgcaggacatcgtctacgagccgatgcgcgcc
ggcgccgacatcgcgccgctcaccgtggacggccggccgctggggcggccgctggtgctg
cattttcgcgccgaaccgccggcgaacaaggacgaccgcgtggacgccgccctggaggcc
tgcgccaaccacatcgtggcgctgctggccggcacgcaccgcatcggcgaggtgccgctg
caaccgggcgatctggccgtgctgctgcctcagaacacacatatcgcccagttgcgccgc
aagctgcagcagcgcggcgtgccctgcgcgggcgcgggccgcagcaacgtctttgccacc
gagatcgcgcgcgaactgcagctcgttctctacgccgtcgagcatcgcgaggaaggcgtg
atgcgggccgcgctgaccacgcgcctgctcggtgtgccgctcgactgcttgcgtgcgttg
gagcaaaccccggcgcgatggctggccgaggtgcagcgcttcaccgagtggcagcgccaa
tggcgccaggaaggcgtgctggcgctggtgcagtcgctgctcgccgcggcggcaccgcgg
ttcctggccggggtcgagggcgagcgcgacctcaccgacctgcgccacctcggcgagctg
ctgcagcagcgcgagcgcgaacgccccggcagcgcccagctcatcgactggctggccgcg
cagcgtgacgaggatgccgccgaggacgaggaacgtcagcagcgcatcgagtcggacacg
cgccgcgtgcagctcatgacgctgcacaagagcaagggccttgagttcccggtcgtgctg
ttgccgctgatgtgggcgcacgagggtcgcgacatcaagctgccgctgcgcagctgcgcc
gagggtgaacgcgagctggtgctcggcggtcccgatcatgccgaggcctgcgcgcaggcc
gcgcgtgaggatcaggacgagcgctttcgcatcctctacgtggcgctgacccgcgccagg
ctggcgtgccacgtctacgccttgccgcccacgcgctgcgcggacggcaagaccaaggcg
ccgctcgtcgatcctcatcgttccgcgctcgacgccatgctggatcgcgcatggcgcaac
ggtgaggcagtcctggatcgcctcgatggcgtcgacttccgtcgcgacgactggccatgg
ccgcgcctttgccatgcaccggagcgtggggatgccgcgtccgcactgcgtgccttgccg
ctgccgccggcgcggcccatgcgtcagctgtggagcttttccgcgctggcccatgtgcag
ggcacggcgctggaggagccgcccgccgccgacgagctcggcctgccggccgtggccgcg
gacatcgacgcgctgcccgccgctgcggtcgccgccccgcaccccgagctgctcgcgctc
tcgccctggcgtggcgcggcgtttggcaacgcgctgcatgccatcttcgagcggcgcgtg
ccgggtttgtcgatggcggagcagtccgcgctgatccgccgctgtctgctcgaagaaggc
gtccgcgagggcgacgaggccgaggcgctggtggcgcgcatcgccgcacgcaccgaagcg
acgctcgcggccgagatcctgcccggctgcacgctcgccgccttgccgccgcgggcgcag
cgcgccgagatggcgttccattacctgctcgacgatgtctccctcgccgccgtgcgccgc
gcctgtgccgaacacggcgagcctgcgctcgtgccgcgcggcgcggccggcaccctgcgc
gggctgatgagcggcaagatcgacctcgtcttcgaacacgccgggcgcttccacgtgctc
gactacaagagcaactggctgggcgacaccctggacgcctatcgacccgaacagctgggc
gccgcgatggacgcgcatcactaccgtttccaggcgctgctctacacgctggcgctcgat
cgctacctgcgccggcgcgtgccgcgttatgcacgttcccaacggctgggcgatgcggtg
tacctgttcgtgcgcgcggccggtctcgcgcccagggccggcctttggcggcaacgcttc
gacgaggcgctgctcgatgccgtcgaccgcgcgctgggcgcgcctgcggaggccgcatga
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