Aerosticca soli: ALSL_2501
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Entry
ALSL_2501 CDS
T06043
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rbd
Aerosticca soli
Pathway
rbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ALSL_2501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbd03019
]
ALSL_2501
03400 DNA repair and recombination proteins [BR:
rbd03400
]
ALSL_2501
Enzymes [BR:
rbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ALSL_2501
Messenger RNA biogenesis [BR:
rbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ALSL_2501
DNA repair and recombination proteins [BR:
rbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ALSL_2501
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBD81125
UniProt:
A0A2Z6E7J7
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All DBs
Position
complement(2650395..2652197)
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AA seq
600 aa
AA seq
DB search
MSPARETLRRVFGYPAFRGEQEAIVEHLLAGGDALVLMPTGGGKSLCYQIPALLRPGTGI
VVSPLIALMQDQVEALAAAGVAAACLNSALGADAQREVERRLLAGELDLLYVAPERLLTA
RFLQLLASIEVALFAIDEAHCVSQWGHDFRPEYRALTVLHERFAQVPRIALTATADARTR
EEIAEYLALERARCFLASFDRPNLRYRVALKHDPRAQLMRFLDDHRGEAGIVYAMSRRKV
DETAAWLAAAGIEALPYHAGLDAATRAANQQRFLREDGVVMVATVAFGMGIDKPDVRFVA
HLDLPRSMEGYYQETGRAGRDGLPAEAWMIYGLADVVTMSQMIAQSASADARKRVERQKL
EALLAYAETTRCRRELLLGAFGEYYRGPCGRCDNCLDPPGTWDATVPARKALSAVYRSGQ
RFGAGHVIDILRGADDARLRTLGHDRLSVYGIGADLDERGWRSVFRQLLAAGLLEADAEG
FGTLRLTAASRAVLKGEQTVRMRSDARAVPSRRHRAVAGGHAQLGLAAHEQPLWEALRAL
RLQLAREQGVPPYVIFHDATLLAMLHARPRDMAELARIPGVGSAKLERYGRAFLAVFPAD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgcgcgcgagaccctgcgccgtgtgttcggctatcccgccttccgcggcgag
caggaggcgatcgtcgagcatctgctcgccggcggcgatgcgctggtgctgatgcccacc
ggcggcggcaagtccctttgctaccagattcccgcgctgctgcggcccggcaccggcatc
gtggtgtcgccgctgatcgcgctgatgcaggaccaggtcgaggcgctcgcggcggccggc
gtggccgcggcctgcctcaactccgcgctcggcgcggatgcgcagcgcgaggtcgagcgg
cgcctgctggccggcgagctcgacctgctctacgtggcgccggaacggctgctcaccgcg
cgcttcctgcagctgctggcaagcatcgaggtggcgctgttcgccatcgacgaggcgcat
tgcgtgtcgcaatggggacacgacttccgccccgagtaccgcgcgctgaccgtgctgcac
gagcgtttcgcgcaggtgccgcgcatcgcgctcaccgccaccgccgacgcgcgcacccgc
gaggaaatcgccgagtaccttgcgctcgagcgggcgcggtgtttcctcgccagcttcgac
cggcccaacctccgctaccgcgtggcgctcaagcacgacccacgcgcgcagctcatgcgt
tttctcgacgaccatcgcggcgaggccggcatcgtctacgccatgagccgccggaaagtg
gacgagaccgccgcctggctcgccgccgccggcatcgaggcgctgccctaccacgccggg
ctcgacgcggccacgcgcgcggccaaccagcagcgtttcctgcgcgaggacggcgtggtg
atggtggccacggtcgctttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcg
cacctggatctgccgcgctcgatggagggctactaccaggagaccggccgcgccggccgc
gacgggctgccggccgaggcgtggatgatctacggcctcgccgacgtggtgacgatgagc
cagatgatcgcccagtccgcatcggccgacgcgcgcaagcgcgtcgaacggcagaagctg
gaagcgctcctggcctacgccgagaccacgcgctgccggcgcgaactgctgctcggcgcc
ttcggcgagtactaccgcggcccgtgcggtcgctgcgacaactgcctcgatccgccgggc
acctgggatgccaccgtgccggcgcgcaaggcgctgtcggcggtctaccgcagcggccag
cgcttcggtgccggtcatgtgatcgacatcctgcgcggcgcggacgatgcgcgtctgcgc
accctcggccacgaccggctttccgtgtatggcatcggcgccgacctcgatgagcgcggc
tggcgctcggtgttccgtcagctgctcgccgccggcctgctcgaggcggatgccgagggc
ttcggcaccctgcgcctgactgccgccagccgggcggtgctcaagggcgagcagacggtg
cgcatgcgcagcgatgcccgcgccgtgccgtcgcgccggcaccgtgcggtcgccggcgga
cacgcgcagctcggtctggccgcccacgagcagccgctatgggaagccttgcgcgcgctg
cgcctgcaactggcgcgggagcagggcgtaccgccgtatgtgatcttccacgacgccacg
ctgctggccatgctgcacgcccggccgcgcgacatggccgaactcgcgcgtattccgggc
gtcggcagcgccaagctcgagcgttacggccgggccttcctggccgtctttcccgccgac
tga
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