KEGG   Aerosticca soli: ALSL_2627
Entry
ALSL_2627         CDS       T06043                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
rbd  Aerosticca soli
Pathway
rbd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rbd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ALSL_2627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rbd03019]
    ALSL_2627
Enzymes [BR:rbd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ALSL_2627
Messenger RNA biogenesis [BR:rbd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ALSL_2627
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: BBD81251
UniProt: A0A2Z6E8U6
LinkDB
Position
complement(2793343..2794977)
AA seq 544 aa
MSQTVLTDTYFRQFDLHPSLQQGLDEAGFVRCTPIQALTLPVALAGRDVAGQAQTGTGKT
CAFLVALMNRLLTRPAAPDRKDGDPRALVIAPTRELAIQIDKDARSIGRHTGLKIALIYG
GVDYDKQRQQLREGCDIVIATPGRLLDYYKQHVFGLDSVEVMVVDEADRMFDLGFIKDVR
YIFRRLPPRERRQVLLFSATLSHRVLELAYEHMHEAEKLVVETDNVTADRVRQRVYFPAK
EEKLPLLLNLIERERPARSIVFVNTKMAAERVTERLKKQGHRVGALSGDVPQLKRQKLLQ
RFQDGQLDILVCTDVAARGLHIPAVSHVFNYDLPQDAEDYVHRIGRTARLGAEGDAISFA
CDLYAMSLPEIEAYIGQKIPVATIEPELLVMPKPREMDAAFAADTAADSAAFGDKVAPRT
PAGRPGPRPRPRKNIADAPRPTPATAETAAPAPAPAPAGEDGPARKRRRRGGRGRRRPEA
ETPAVQAAQGPARPAREERRPPPAEPAAAKPAQRPSRQVAATAPRPAAKKPGFFRRLARL
FTGR
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgtcccagaccgtactcaccgatacctatttccgccagttcgaccttcacccctccctg
cagcagggactcgacgaagccggtttcgtccgctgcacgccgatccaggcgctgacgctg
ccagtcgccctcgccggccgcgacgtcgccggccaggcgcagaccggcaccggcaagacc
tgcgccttcctggttgcgctgatgaaccgcctgctcacccggcccgccgcgcccgaccgc
aaggacggcgatccgcgcgcgctggtgatcgcgccgacccgcgagctggcgatccagatc
gacaaggacgcgcgcagcatcggccgccacaccggcctcaagatcgcgctgatctacggc
ggcgtcgactacgacaagcagcgccagcagctgcgcgagggctgcgacatcgtcatcgcc
acgccgggccggctgctggactactacaagcagcacgtgttcggcctcgacagcgtcgag
gtgatggtggtcgacgaggccgaccgcatgttcgacctcggcttcatcaaggacgtgcgc
tacatcttccgccggctgccgccgcgcgagcgccgccaggtgctgctgttctcggccacg
ctcagccaccgcgtgctggagctcgcctacgagcacatgcacgaggccgagaagctggtg
gtggagaccgacaacgtcaccgccgaccgggtgcgccagcgggtctatttcccggccaag
gaagagaagctgccgctgctgctcaacctgatcgaacgcgaacggccggcgcgcagcatc
gtcttcgtcaacaccaagatggccgccgagcgtgtcaccgagcggctgaagaagcagggc
caccgcgtcggcgcgctgtccggcgacgtgccgcagctcaagcgccagaagctgctgcag
cgtttccaggacggccagctcgacatcctggtctgcaccgacgtcgccgcgcgtggcctg
cacatcccggcggtcagccacgtgttcaactacgacctgccgcaggatgccgaggactac
gtgcatcgcatcggccgcaccgcgcggctgggcgccgagggcgacgcgatcagcttcgcc
tgcgatctctacgccatgagcctgccggagatcgaggcctacatcgggcagaagatcccg
gtggcgacgatcgaacccgagctgttggtgatgccgaagccgcgcgagatggatgccgcg
ttcgccgccgacacggccgccgacagcgcggccttcggcgacaaggtggcgccacgcacg
ccggcgggccggcccgggccgcgtccgcggcctcgcaagaacatcgccgatgcgccgcgc
ccgacgccggccacggccgagacggcggcgcccgcaccggcgcccgcaccggcgggcgag
gacggacccgcgcgcaagcgtcgtcggcgcggcgggcgcggccgtcggcgtccggaagcg
gagacccccgcggtccaggccgcccagggtccggccaggccggcccgcgaggagcggcgt
ccgcctccggccgaaccggccgcggccaagcccgcgcaacgtccgtcgcgccaagtggcg
gcgaccgcgccgaggcctgcggccaagaagccggggttcttccggcggctggcccggctc
ttcaccgggcgctga

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