Aerosticca soli: ALSL_2630
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Entry
ALSL_2630 CDS
T06043
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rbd
Aerosticca soli
Pathway
rbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ALSL_2630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbd03021
]
ALSL_2630
03019 Messenger RNA biogenesis [BR:
rbd03019
]
ALSL_2630
Transcription machinery [BR:
rbd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ALSL_2630
Messenger RNA biogenesis [BR:
rbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ALSL_2630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
BBD81254
UniProt:
A0A2Z6E8V9
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All DBs
Position
2795773..2797548
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AA seq
591 aa
AA seq
DB search
MSDTESQETHDAARVDTKPVAEPAPRPRSRRSAGADRPAEQPAASAQTETAAPPAPVAPS
PSEPAAAQATHAAERETSAPMPVAASAPGEGASSAAPSAGQPAAQAQGNPGNGQGGQNYE
RRNDRESRRRRRHERNQQQRGQGGGGNAPRPNPHGYPMDDDENADIGSSDRLINLTELKR
MKAPELLAFAESLGLREGVARQRRQDVIFNILKAHARSGGGIWAEGVLEILQDGFGFLRS
ADESYLAGPDDIYVSPSQIRRFNLRTGDYITGRVRHPKEGERYFALLKVDDINGDPPEAS
KNKMLFENLTPLFPRKAFHLERGNGSTEDITGRILDLMAPIGRGQRGLIVSQPKSGKTMM
LQNIAQAIQYNHPDVHLIILLVDERPEEVTEIARTVRAEVISSTFDEPAARHVQVAEMVI
ERAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNV
EEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMEVHLSRRIAEKRVYPAIDINRSGTRR
EDLLIDPDLLAKIWILRKLLHPMDELAAMEFMLEKMKNTKTNDEFFNSMKR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgataccgaaagtcaggaaacccacgacgccgcgcgcgtcgacaccaagcccgtg
gccgaacccgcgccgcgtccgcgcagccgtcgttcggccggtgccgacaggccggccgag
cagcccgccgcgtcggcccaaaccgaaacggccgcgccgccggcgccggtcgcgccatcg
ccgtccgaacccgccgccgcgcaggccacgcacgccgccgagcgcgaaacgtccgcgccg
atgccggtggccgccagcgcacccggcgaaggcgcctcgtccgccgccccgtcggcagga
cagccggcggcgcaggcccagggcaatccgggcaacggacaaggcggccagaactacgag
cgtcgcaacgatcgcgaaagccgccgccggcgccgccacgaacgcaaccagcaacaacgc
gggcagggtggcggcggcaacgcgccgcggcccaatccgcacggctatccgatggacgac
gacgagaacgccgacatcggcagcagcgaccggctgatcaatctcaccgaactcaagcgg
atgaaggcgcccgaactgctcgccttcgccgaatcgctgggtctgcgcgaaggcgtcgcc
cgccagcgccgccaggacgtgatcttcaacatcctgaaggcccatgcgcgctccggcggc
ggcatctgggccgagggcgtgctggagatcctgcaggacggcttcggcttcctgcgctcg
gccgacgagtcctacctcgccggccccgacgacatctacgtctcgcccagccagatccgc
cgcttcaacctgcgcaccggcgactacatcaccggtcgcgtgcgccatccgaaggaaggc
gagcgctacttcgcgctgctcaaggtcgacgacatcaacggcgatccgcccgaggcgtcg
aagaacaagatgctgttcgagaacctgacgccgctgttcccgcgcaaggcgttccacctc
gaacgcggcaacggttccaccgaggacatcaccggccgcatcctggacctgatggcgccg
atcgggcgcggccagcgcggactgatcgtctcgcagcccaagtccggcaagacgatgatg
ctgcagaacatcgcgcaggccatccagtacaaccatccggacgtgcacctcatcatcctg
ctggtcgacgagcggccggaggaggtcaccgagatcgcccgtaccgtgcgcgccgaggtg
atttcctccaccttcgacgagccggccgcgcgccacgtgcaggtcgccgagatggtgatc
gagcgcgccaagcgcctggtcgagcacaagaaggacgtggtcatcctgctcgactcgatc
acccgcctggcgcgtgcctacaacaccgtggtgccgagctcgggcaaggtgctcaccggc
ggcgtggacgccaacgcgctgcagcggcccaagcgcttcttcggcgccgcacgcaacgtc
gaggaaggcggctcgctgaccatcatcgccaccgcgctgatcgacaccggcagcaagatg
gacgaggtgatctacgaggagttcaagggcaccggcaacatggaggtgcacctgtcccgc
cgcatcgccgagaagcgcgtgtatccggccatcgacatcaaccgctccggcacccgccgc
gaggatctgctgatcgacccggacctgctcgccaagatctggatcctgcgcaagctgctg
cacccgatggacgagctggcggcgatggagttcatgctggaaaagatgaagaacaccaag
accaacgacgagttcttcaattcgatgaagcgctga
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