Rickettsia bellii RML369-C: RBE_0258
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Entry
RBE_0258 CDS
T00339
Symbol
xth1
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rbe
Rickettsia bellii RML369-C
Pathway
rbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBE_0258 (xth1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbe03400
]
RBE_0258 (xth1)
Enzymes [BR:
rbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RBE_0258 (xth1)
DNA repair and recombination proteins [BR:
rbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RBE_0258 (xth1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABE04339
UniProt:
Q1RJX5
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All DBs
Position
302632..303453
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AA seq
273 aa
AA seq
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MKIVTWNINSLRLRIDLLKRLAYEHQPDIILLQETKVDDPLFPLEVIKNIGYEHVIYSGQ
KSYNGVAIISKLPLQNVSSLELYNGDKRHIAATVNNIEIHNFYVPAGGDIPDIELNSKFK
HKLEYIRLMQEWLTNNRTRDDKIIIAGDLNIAPHPHDVWSSKQLRNVISHTDIERSLLVE
LQNSLEFIDSSRHFVPLDEKFYTWWSYRNVDWKKSNRGRRLDHIWVSNNLKDELFSIHLL
SEARDWMPPSDHVPYFVTLRCHPVACPRDPKNN
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagttacgtggaacattaattcgctacgtttacgtattgatttattaaaaaga
ttggcatatgaacatcagcctgatattattttattacaagagacaaaagtagatgatcct
ttatttcctcttgaagtaattaaaaatataggctatgaacatgtaatatattcggggcag
aaatcatataacggcgttgctattatctcaaaacttccactgcaaaatgtttcttcgctt
gagctatataacggtgataaaaggcatatagcagctactgttaataatattgagatacat
aatttttatgttcctgccggtggtgatatacctgatatagagctaaattcaaagtttaaa
cataagctagaatatataaggttgatgcaagaatggctgactaataaccgcaccagagat
gataagattataattgcaggtgatttaaatattgcaccacacccgcatgatgtatggtct
agcaagcagctgcgaaatgttattagccatactgatattgagcgttctttattggtagaa
ttgcaaaactcattagagtttattgatagtagtaggcattttgtgccacttgatgaaaaa
ttttatacttggtggagttatagaaacgtagattggaaaaaatctaacagaggtaggcgg
cttgatcatatttgggttagtaataatttaaaagatgaattgttttctatacatttatta
tcagaagcaagagattggatgccaccttcggatcatgtgccgtattttgtgacgttaaga
tgtcatcctgtggcttgtccacgggatccaaaaaacaactaa
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