KEGG   Rickettsia bellii RML369-C: RBE_1152
Entry
RBE_1152          CDS       T00339                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta prime chain
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
rbe  Rickettsia bellii RML369-C
Pathway
rbe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rbe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RBE_1152 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rbe03021]
    RBE_1152 (rpoC)
   03400 DNA repair and recombination proteins [BR:rbe03400]
    RBE_1152 (rpoC)
Enzymes [BR:rbe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RBE_1152 (rpoC)
Transcription machinery [BR:rbe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     RBE_1152 (rpoC)
DNA repair and recombination proteins [BR:rbe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      RBE_1152 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C Biotin_lipoyl_2 Peptidase_M23 RnfC_N YqfD
Other DBs
NCBI-ProteinID: ABE05233
UniProt: Q1RHD1
LinkDB
Position
complement(1242224..1246309)
AA seq 1361 aa
MSVVNFYGQLSNTQQFDQIRINIASPEQVRSWSFGEVIKPETINYRTFKPEKDGLFCARI
FGPVKDYECLCGKYKRMKNRGITCEKCGVEVTVSRVRRERMGHIELAAPVAHIWFLKSLP
SRISTLLDMTMRDIEKILYFENYVVVDPGLSILQKGELLTEEELQKAKDKYGEDAFTASI
GAEVVQQMLKELDFPTLKQELYEELQNTTSEVKKKKLVKRLKLVEDFLESENKPEWMIMN
VLPVMPPELRPLVMLDGGRFATSDLNELYRRVINRNNRLKKLIESKAPDIIVRNEKRMLQ
EAVDALFDNGRRGRAAKNANKRPFKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPE
LKLHQCGLPKKMALELFKPFIYSKLELYGIATTIKAAKRMVEAEKPEVWDVLEEVIREHP
VLLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAVHIPLSIEAQLEA
RVFMMSTNNILSPANGRPIIVPDKDIVLGLYYLTLAFDHEVGEGMMFSDLTEMEHALYNK
FITIHTKIKYRRNQLNAEGKIVPVIVDTTYGRLMVGELLPSNPNIEYKFINKPLTKKDIS
LVIDLVYRHCGQKATVIFADQLMKLGFKYACSSGISFGMDDMVVPKSKIVHIDETQLEIK
EFEQQYSNGLITYGEKYNKVIDAWSRCTDRVANDMMKEIAKPPVSDDSNQQKINSIYMMA
ISGARGSFQQIKQLGGMRGLMTKSNGQIIPTPIIANFKEGLTVFECFNSANGMRKGQIDT
ALKTASSGYLTRKLVDVAQDCIITEKDCNTDKGIEVKSIIEGGEVIVPLAEMILGRTAAI
NIYHPVTNDLILTKGELINESKLEQIESAGLDRIMIKSVLTCESSTGICAICYGRDLATG
SLVSEGEAIGVIAAQSIGEPGTQLTMRTFHIGGAATKGAEVSSVEASYDAKVKILSRNVV
INSEERKIVMSRNCELLLLDNNGNEKAHSKIPYGARLLVDEGDMVTKTQKLAEWDPYTIP
IITEKSGKVLFKDMVEGISVRDVTDEATGIPSKVIIESKQYSRGAELRPRIQLLDAKGEI
IMLSNGLEARYYLPVGAVLSVEDGVQISVGDIIARIPKESTTTKDITGGLPRVAELFEAR
RPKDHAVIAEIDGRVEFGKDYKSKRRIIIHPVDGSMGLEYMVPKGKHVVVNEGDFVKKGD
LLIDGNPVLQDILKVMGVELLASYIVKEVQAVYRLQGVKIDDKHIEVIIRQMLQKVEITD
SGGTTLLVGEKIDRREFDEINEKAIKNGLRPADAQLILQGITKSSLQTRSFISAASFQET
TRVLTEAAIAGKVDKLRGLKENVIVGRLVPAGTGFLYGQNA
NT seq 4086 nt   +upstreamnt  +downstreamnt
atgagtgtagtaaatttttacggacaattaagtaatactcaacaatttgatcagataaga
attaatatagcaagtccagaacaagtacgttcatggtctttcggtgaagtaataaaacct
gaaactattaattatcgtacttttaaacctgaaaaagatggtttattttgtgcaagaatt
tttggtccagtaaaagattatgaatgtctttgcggtaagtataagcgaatgaaaaaccgc
ggtattacttgtgaaaagtgcggtgttgaggttactgtttctagagtaagacgtgaaaga
atggggcatattgaacttgcggctcccgttgctcatatttggtttctaaagtctcttcct
tcaagaattagtacgcttcttgatatgacgatgcgagatatagaaaaaattctttatttt
gaaaattatgtggtagttgatcctggattatctattctacaaaaaggtgagcttttaact
gaagaagagctgcaaaaagcaaaggataaatacggggaagatgcatttactgcctctatt
ggtgcagaagtagtacaacaaatgctaaaagagcttgatttcccaacattaaagcaagag
ctgtacgaagaactacaaaatacgacttcagaagtaaaaaagaaaaagttagtaaagcgt
ttaaaattagtagaagactttttagaatctgaaaataagccagaatggatgattatgaac
gtgttgccggtcatgcctcctgaacttagaccgcttgttatgttagatggtggaagattc
gctacttcagatcttaatgaactttatagaagagtaattaatagaaataatcgtctaaag
aagcttatagagtcaaaagcacctgatataattgttagaaatgaaaaaagaatgctgcaa
gaagcagtggatgcgttatttgataacggacgccgtggtagagcagcaaaaaatgctaat
aagcgtccatttaagtcattaagcgatatgctaaaaggtaagcaaggtcgtttccgtcaa
aacttacttggtaaaagggtggactactcaggacgttcagttatcgtagtaggacctgag
cttaaacttcatcagtgcggtttacctaaaaaaatggctctagaactgttcaagccgttt
atttactcaaaacttgaattatatggtattgctacaactattaaagcagctaaaagaatg
gttgaggctgaaaagcctgaagtttgggatgtgcttgaggaagttataagagaacaccct
gtattacttaacagagctccgacactgcaccgtttgggtatccaagcatttgagccatta
ttaatcgaaggtaaggcaatacagcttcatccgcttgtttgtgccgctttcaatgcggac
tttgacggggaccaaatggctgtacatattcctttatcgattgaagcccagcttgaagct
agggtatttatgatgtctactaataatattttaagccccgctaatggacgtcctattatt
gtaccagataaagatatagtactcggcttatattatttaacgcttgcttttgatcatgag
gtaggtgaggggatgatgttctcagacctaactgaaatggagcatgctttatataacaaa
tttataacgattcatactaagataaaatatcgtcgtaatcagttaaatgctgagggtaaa
atagttcctgttatagttgatactacttatggaagattaatggttggtgagttgttgcct
tctaatcctaatatagaatataagtttattaataagcctttaactaaaaaggatatatct
ctagtaatagatttagtctatcgtcactgcggtcaaaaagctacagtaatttttgctgat
cagttgatgaagcttggtttcaaatatgcttgttcttcaggtatttcttttggtatggat
gatatggttgtaccaaaatctaaaattgttcatatcgatgaaacacagcttgagattaag
gaatttgagcagcaatattcaaatggtttaattacttacggcgaaaaatataacaaggta
attgatgcatggtcaagatgtactgatagagtagctaatgacatgatgaaagaaattgct
aaaccacctgttagtgatgattcaaatcaacagaagataaactctatatatatgatggct
atttcaggtgctagagggtctttccagcagattaaacagcttggtggtatgcgtgggctt
atgactaaatcaaatggtcaaattataccaacacctattatcgctaactttaaggaagga
ttaactgtatttgaatgctttaactctgctaacggaatgcgtaaagggcaaatagataca
gctttaaaaactgcaagctcaggttacttaacaagaaaattagtagatgttgcacaagat
tgtattattactgaaaaagattgtaacactgataaaggtattgaagtaaagagtattata
gaaggtggtgaagtaatagtgcctttagctgaaatgattttaggtcgtacggcagctatt
aatatatatcatccggtgactaatgatttaattctcaccaaaggtgaattaattaatgag
tctaaattagagcaaattgagtctgcaggtttagatagaattatgattaagtcggtatta
acctgtgaaagttccaccggtatatgtgctatatgttatggtagagatcttgctactggt
tcgttagtttccgaaggggaagctataggtgtgatcgctgctcaatctatcggtgagcct
ggtacacagcttacaatgagaactttccacattggaggagcagcaacgaaaggagcagaa
gtttcttctgtagaagcttcatatgatgcgaaagtaaaaattcttagccgtaacgtggtt
attaattccgaagaacgcaaaattgttatgagccgtaactgtgagttattattacttgat
aataacggcaatgaaaaagctcatagtaaaatcccatatggtgctagattacttgttgac
gagggtgatatggttactaagacgcagaagcttgcagaatgggatccatataccatacct
atcattactgaaaaatctggtaaggtattatttaaagatatggttgaggggatttcggtt
cgtgatgtaactgatgaggcaactggtattccaagcaaagttatcattgaatcaaaacaa
tattcacgtggagcagaactaagaccacgaatccagcttcttgacgctaaaggtgaaatt
atcatgttatcaaatggtttagaagcaagatattatttaccagttggagcggttttaagt
gtagaagatggggtgcagatatcagtaggtgatataattgcacgtattcctaaagagtca
actactactaaggatattactggtggtttaccaagagtagccgagcttttcgaagcaaga
cgtccaaaagatcatgcagtgattgctgagatagatgggcgagtagagttcggtaaagat
tataaatctaagagacgtattattatacacccagttgacggttcaatgggtcttgagtat
atggtgccaaaaggtaagcatgttgtggttaatgagggagactttgttaagaaaggtgac
ttattaattgatggtaatccagtacttcaggatattttaaaagtgatgggtgtagaactt
cttgcaagctatattgttaaagaggtccaggctgtttatcgtttacaaggggtaaaaatt
gatgataagcacatagaagtaattattcgtcagatgttacaaaaagtagaaataacagac
tcaggcggtactacattattagtaggtgagaagatagatcgacgtgaatttgacgaaata
aatgaaaaagcaattaagaatggtttaagacctgctgatgctcagttaatattacaaggt
attactaagtcttctctgcaaactagatcatttatatctgctgcatcattccaagaaact
actagggttttaaccgaagctgctattgctggtaaggttgataagctacgaggacttaaa
gagaatgttatagttgggcgtttagtacctgcagggacagggtttctttatggacaaaat
gcgtaa

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