Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_01290
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Entry
BG454_01290 CDS
T05218
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbg03019
]
BG454_01290 (hrpB)
Enzymes [BR:
rbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BG454_01290 (hrpB)
Messenger RNA biogenesis [BR:
rbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BG454_01290 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
CON_HrpB
ResIII
Chap-C
Motif
Other DBs
NCBI-ProteinID:
ATX64633
UniProt:
A0A2K8K9S9
LinkDB
All DBs
Position
complement(264395..266830)
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AA seq
811 aa
AA seq
DB search
MRLPIDDILPDLTAALRSAGRAVLQAPPGAGKTTRVPLALLEQVAGRIVMLEPRRLAARA
AAEQMARLLGEDVGKTVGYRIRGEAVTSPATRIEVVTEGILTRMLQSDPELRGVGAVIFD
EFHERSLNADLGLALTWEVREALRPDLAVVAMSATLDAEPVARLLDDAPILTAQGRAFAV
DTRWLPRPRPKAERFEVAAVNLIVQAVTEAEGSVLVFLPGEGEIRRVATALQGRVGEAGI
YPLYGALPFAQQRAAIAPMAGGRKIVLATAIAETSLTIEDIRIVVDCGLARRARFDPGSG
MSRLVTERVTRAEAEQRRGRAGRVAEGVCYRMWARSEEGALAAFAPPEIERADLSGLALE
LALLGGAEDLRFLTPPPQGAMSEARALLCSLGALGDAGRITAHGRAMAALPLHPRLAHML
LSAGKEGAGLAALLSERDIVQGAPVDLGLRLMALRDPRNFAERTPYALHRATVERVREDM
RRLARLAPKTQTTLSPAEMAALAYPDRIGLRRKGDAPRYVLSGGKGAVLPDGDGLGQMRL
IVVTDTDGNPQEARIRQAIALSDAELRVLYGDQIVWQNRCTWSKRHRRIEARAQQCFGAL
VLEDRIWRDPDPQAVMQAACDGLRDLGLPVSDAARRFIARVELLRTQGAEMPDMREDALL
TGLESWLGPYLAGCRTADQLRAVDLLPALRAMLDWGQIQMLDEMAPAQFVTPLGNRIPID
YSGEAPEISVRLQEMFGLSSHPVIGPARQPLRITLLSPARRPLQVTMDLPGFWAESYADV
RKDMRGQYPRHPWPENPLEAAPTLRAKPRKT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgcccatagatgacattctgccagacctgaccgcagcattgcgcagcgcgggg
cgcgcagttcttcaggcgccacccggtgcaggtaagacaacgcgcgtgccgctggccttg
ctggagcaggtcgcgggcaggattgtgatgctggaaccgcgcagactggccgcgcgggcc
gctgctgaacagatggcgcggcttctgggcgaagatgtgggcaaaacggtgggttaccgt
attcgcggcgaagctgtgacctcgcccgccacacgcatcgaggtcgtgaccgagggcatt
ctgacgcggatgttgcaaagtgaccccgaattgcgcggcgtgggggcggtgatctttgat
gaattccatgaacgctcgctcaatgccgatctgggccttgccctgacatgggaggtacgc
gaggcgctgcgccctgatctcgcagtcgtggcgatgtcggccacgctggatgcagagccc
gtcgcgcggctgttggatgacgcccccatcctgaccgcgcaaggccgcgcctttgctgta
gatacccgctggctaccccgcccgcgcccaaaggccgagcggtttgaggtggcggccgtc
aatctaatcgtgcaggccgtgaccgaggccgagggttcggttctggttttcctgcccggc
gagggtgaaatccggcgtgttgcgacagcgctgcaagggcgcgtgggtgaggccgggata
tacccgctatacggtgcgctgccgtttgcgcaacaacgcgcggcgattgcgcctatggcg
ggcgggcgcaagatcgtgctggccacagcgattgccgaaacttcgctgacgattgaggat
attcggattgttgtggattgtgggctggcgcggcgggcgcggtttgatccgggcagcggt
atgtcgcggctggtcaccgaacgtgtgacccgcgccgaggcagaacagcggcgcgggcgc
gcagggcgcgtggcagaaggggtctgctaccggatgtgggcacgcagcgaggaaggcgcg
cttgcagcctttgccccgccagaaatcgagcgtgcggatctgtcgggtctggcgcttgaa
cttgcgctgttgggcggggccgaggatttgcgctttctgacgccacccccgcagggggcg
atgtccgaggcgcgcgccttgttgtgcagtctgggggcgctgggtgatgccgggcgcatc
acggcgcatggccgtgcgatggcggcacttccgctgcacccgcggcttgcccatatgctg
ctgagcgcaggcaaggagggggcgggccttgcagcactgctgtccgagcgtgacatcgtg
caaggcgccccggtcgatctggggctaagactgatggcgttgcgcgacccgcgcaatttt
gccgaacgcacaccctatgcgctgcatcgcgccactgtggaacgggtgcgtgaagatatg
cgccgccttgcacggcttgccccgaaaacacagaccacactcagccccgccgagatggca
gcgctggcctatcccgaccgaatcgggctgcgccgcaagggcgatgccccgcgctatgtt
ctgtcggggggcaagggggctgtcctgcctgatggcgatgggttggggcagatgcgactg
atcgtggtgacggatacagatggaaacccgcaagaggcgcggatcagacaggcgattgcg
ctgtcagatgcagaattgcgcgtgctttatggcgatcagatcgtctggcaaaaccgttgc
acatggtcgaaacgtcaccggcggatagaggcgcgtgcgcagcaatgtttcggcgcattg
gtgctggaggatcgcatctggcgcgacccggacccgcaagcggtcatgcaggccgcatgc
gacgggttgcgtgatctgggcctgccggtgtcagatgcggcgcggcgctttatcgcgcgg
gtggaattactgcgcacgcaaggggccgagatgccggatatgcgcgaagacgcccttttg
accggattggaaagctggcttggcccctatctggctggatgccgcacggctgaccagttg
cgcgcggttgatttgttgccagcattgcgtgcgatgctggattgggggcagatacaaatg
ctggacgaaatggccccggcgcagtttgtcacccccttgggcaacaggataccgattgat
tattcgggcgaagcgccagaaatttcggtccggctgcaagagatgtttggcctgtccagc
catcccgtcatcggacctgcccgccagcccctgaggatcaccctgctatcacccgcgcgc
aggccgctgcaggtgacaatggacctgccgggcttctgggccgaaagctatgctgatgtg
cgcaaggatatgcgcggccaatacccgcgtcacccctggcccgagaacccgttggaggca
gcccccaccttgcgcgcaaaaccgcgcaagacatga
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