Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_01865
Help
Entry
BG454_01865 CDS
T05218
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbg03016
]
BG454_01865 (rnd)
Enzymes [BR:
rbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BG454_01865 (rnd)
Transfer RNA biogenesis [BR:
rbg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BG454_01865 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ATX64732
UniProt:
A0A2K8K5K0
LinkDB
All DBs
Position
384268..385440
Genome browser
AA seq
390 aa
AA seq
DB search
MELITTTEDLARFCAQAQAAPYVTVDTEFLRERTYYAKLCLLQMALPGPEGPETGPAVLV
DPLAKGLSLEPFYELLRDTSTVKVLHAARQDLEIFLIEGRSLPKPLFDTQIAAMVCGFGD
QIGYETLVRKLTRGSVDKSSRFTDWSRRPLTDAQLGYALADVTHLRVIYEKLAARLEETG
RASWVAEELATLDDPATYITQPADAWKRVKTRNDSGRFLAIVRELAEFREAHAQSNNVPR
SRVFKDDALLELASLKPQTPDDLGRTRLLLREARKGEIAQGILDAVARGMTCPPENFPKP
ENGRENLQVNPALADLLRVLLKAKSDATGVAAKLIASASDLDALAAGVRDVPALSGWRAA
VFGDDALSLCNGEVGLAVRGERVEVMAVPR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatcaccacaaccgaagatctggcgcgcttttgtgcgcaggcgcaagccgcc
ccctatgtaacagtggataccgaattcctgcgagagcgtacatattacgcaaaattgtgt
ctgttgcagatggccctaccggggccagaggggccggaaactggccctgctgtgctggtc
gaccccttggccaaaggcctgtcgctggaaccgttttacgaattgttgcgcgataccagc
accgtcaaggtgttacatgctgcgcggcaggatctggagatttttctgatcgaagggcgc
agcctgcccaaaccgctgttcgacacccagatcgctgcgatggtctgtggctttggcgac
cagatcggatatgaaacccttgtgcgcaagctgacgcgtggcagcgttgataaaagctct
cggttcacggattggtcgcgcaggcccctgaccgatgcacagctgggctatgcgttggca
gatgtgacgcatctgcgtgttatctatgagaaactcgctgcgcgccttgaagaaactggc
cgcgcaagttgggttgcagaagaacttgccacgctggacgaccctgccacatatatcacg
caacccgccgatgcctggaaacgggtcaagacgcgcaacgactccgggcgctttctggca
atcgtgcgggaactggcagagtttcgcgaagcgcatgcgcaatccaacaatgtgccacgc
tcgcgggtgttcaaggatgatgcgttgctggaactggcctcgctcaagccgcaaacgccc
gatgatctgggacgcacgcgcctgttgttgcgcgaggcccgcaagggagagattgcccaa
ggcattctggatgctgtcgcgcgtggcatgacttgcccgcccgaaaattttccaaaacct
gaaaatggccgcgagaacctgcaagtcaacccggctttggccgatctgctgcgggtcttg
ttgaaggccaaatcagacgcgaccggcgtggcggccaagcttatcgcctcggcatcggat
ctggatgcattggccgcaggtgtgcgggatgtgcccgcgctttctggctggcgcgcggct
gtgttcggggatgacgcgcttagcttgtgtaacggcgaagtcggtctggccgtgcgtggc
gaacgtgttgaggtgatggcggtgccacgctga
DBGET
integrated database retrieval system
