Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_04575
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Entry
BG454_04575 CDS
T05218
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Pathway
rbg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BG454_04575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbg03021
]
BG454_04575
03400 DNA repair and recombination proteins [BR:
rbg03400
]
BG454_04575
Enzymes [BR:
rbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BG454_04575
Transcription machinery [BR:
rbg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BG454_04575
DNA repair and recombination proteins [BR:
rbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BG454_04575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
ATX67678
UniProt:
A0A2K8KKQ3
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All DBs
Position
955277..956293
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AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPSQLEVKPGADPMRQATVVAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVPGVREDVTDIVLNLKSVSLRMDVEGPKRISISAQGPGVVTAAEIQT
SAGIEVLNGDQVICHLDDGASVYMELTVNTGKGYVSADKNRPEDAPIGLIPIDAIFSPVK
KASYEVQPTREGQVLDYDKLTMKVETDGSVSAEDAVAFAARILQDQLQIFVNFDEPESAG
AKDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEEWPPENIDDLAKRFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataaaaactggcaagaattgatcaaaccttcgcagctggaggtcaagccgggc
gctgaccccatgcgtcaggcgaccgttgtggccgaaccgctggagcgtggctttggcctg
acgcttggcaatgcgctgcgccgcgtcctgatgtcttcgttgcaaggtgcggcgatcaca
tcggttcagatcgacaatgtgcttcacgaattctcttccgtgccgggtgtgcgcgaggat
gtgaccgatatcgttcttaacctgaaatccgtgtccttgcggatggatgttgaagggcca
aagcggatttcgatttctgcgcagggtcccggtgttgtgaccgcagccgagattcagact
tcggcgggcattgaggttttgaacggcgatcaggttatctgtcaccttgacgatggcgct
tcggtgtacatggaactgaccgtcaatactggtaagggctatgtttcggccgacaagaac
cgtccggaagatgcgccgattggcctgatcccgattgatgcgattttctcgccagtcaag
aaggccagctatgaagtgcagccaacccgtgaagggcaggtgctggactatgacaagttg
accatgaaagtggaaactgacggttcggtcagcgcggaagatgcggtcgcgtttgcggcg
cgtattctgcaagatcagctacagatcttcgtcaatttcgacgagcctgaatctgctggt
gcgaaggacgatgatgacggtctggaattcaacccgctgctgctgaaaaaggtagacgag
ttggaactgtcggtacgttcggcaaactgcctgaagaacgacaacatcgtctatattggc
gacctgatccagaagacagaagcagaaatgctgcgcacgccgaatttcggccgcaagtcg
ctgaatgagatcaaggaagtgctgtcaggcatgggcctgcatcttggcatggatgtcgag
gaatggccgccagagaatatcgacgatctggccaagcgcttcgaagatcagttctga
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