Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_06405
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Entry
BG454_06405 CDS
T05218
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Pathway
rbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BG454_06405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbg03400
]
BG454_06405
Enzymes [BR:
rbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BG454_06405
DNA repair and recombination proteins [BR:
rbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BG454_06405
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BG454_06405
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BG454_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ATX65501
UniProt:
A0A2K8K7S3
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All DBs
Position
1341069..1342439
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AA seq
456 aa
AA seq
DB search
MHFAFYDLETTGISPAFDQPLQFAAILTDAEFREIERVNLRCRIAPHIIPSPWALAVTGV
RPVQLVDPALPTLFEFTQEISALIERWSPAIWTGFNSIRFDEEILRQAFYQNLQPDIFAT
QFNGTTRFDVLTALYAVWHRQPDLFEWPVDETGRVRFKLDRIAPLNGFVAHTAHDALGDV
EATIHIARQIAQRGPELWSELLANRDKGNVQASLATFQPMALVERFGGGPPRATIGCFCG
NSTSNPNQAAFFDLDAADPANLLMADDAAVFAAVDATPKLIRSVTINKSPALLSVAAPSA
AQLRRAEMIANAPEFRARVGQALAARFPEDPDAPTPPVEKQIYGDFYSHADKALLAEFQR
VDWPRRQEIVASLSDARLRQLGRRLVAFYAPELLSVEEGKQFEAWLRERWSVPASDTVEW
TGLAKAYQALADMRIKEAASPEAIDEIAVYLKRFEA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcgccttctatgaccttgaaaccaccggcatctcgcccgccttcgaccagccc
ctgcaattcgcggccatcctgacagatgctgaattcagggagattgagcgggtcaatctg
cgttgccgcatcgcgccgcacatcatcccgtcgccttgggcactggctgtcaccggcgtg
cgccccgtgcagttggtggatccggcgctgccaacgctatttgagttcacgcaggagatc
agcgcattgatcgagcgctggtcgccagcgatctggaccgggttcaacagcatccgattc
gacgaggagattctccgccaggcattctaccagaacctgcagcctgacattttcgccacc
cagttcaacggcaccacgcgcttcgatgtgctgacggcgctttacgccgtgtggcaccgc
cagcccgacctgttcgagtggcctgtcgacgaaaccggccgggtgcgcttcaagctggac
cgcattgcacccctgaatggctttgtcgcgcatactgcccatgatgcgctcggcgacgtc
gaggcgaccatccacatcgcgcgacagatcgcccaacgcggaccagagctctggtcagaa
ctgctcgccaaccgtgacaagggtaatgtccaggctagccttgcgaccttccagccgatg
gcgctggtcgagcggttcgggggtggcccgccgcgcgcgacaatcggctgtttctgcgga
aactcgacaagcaatcccaatcaggcggctttcttcgatctggatgctgctgatccggca
aatctgttgatggccgatgatgcggcggtcttcgcggcagtcgatgccacaccgaagctc
atccgctctgtgacgattaacaagtcgcctgcattgctgtccgttgccgcgcccagcgcc
gcgcagttgcgccgtgccgaaatgatcgcaaatgcgcctgagttccgcgcgcgggtgggg
caggcgctggccgcgcgcttccctgaagatcctgatgcacccacgcctccggtcgaaaag
cagatatatggcgacttctatagccatgccgacaaggcgctgctcgcggagttccagcgg
gtggactggccaaggcgtcaggagattgttgcgtcgctctctgatgcccgtttgcgccag
ctcggacgtcgccttgtggcgttctacgcacctgagctgctctcagtcgaagaaggtaaa
caattcgaagcatggctccgggagcgctggtcggtgcctgcatcggatactgtcgaatgg
actggccttgccaaagcttatcaggctttggctgatatgcgcatcaaggaagctgcaagc
ccggaagcgattgacgagatcgcggtctatctgaaacgtttcgaagcgtga
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